EnhancerDB
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  3. vista5621[chr1:234749342-234749645]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5621[chr1:234749342-234749645]
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Tissue distribution of vista5621
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Transcription factor that possibly regulate vista5621[chr1:234749342-234749645]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234741562 234749622 POLR2A UCSC Txn Factor no Conserved 107880713
chr1 234741562 234749622 POLR2A UCSC Txn Factor no Conserved 107880714
chr1 234741562 234749622 POLR2A UCSC Txn Factor no Conserved 107880715
chr1 234749259 234749623 CEBPB UCSC Txn Factor no Conserved 107881290
chr1 234749353 234749368 PRDM1 JASPAR yes 118483977
chr1 234749366 234749370 NFE TRANSFAC yes 118483978
chr1 234749367 234749372 GATA2 JASPAR yes 118483979
chr1 234749367 234749380 ZBTB18 JASPAR yes 118483980
chr1 234749409 234749424 MEF2C JASPAR yes 118483981
chr1 234749409 234749427 SRF JASPAR yes 118483982
chr1 234749410 234749415 ETS2 TRANSFAC yes 118483983
chr1 234749410 234749425 MEF2A JASPAR yes 118483984
chr1 234749411 234749423 MEF2B JASPAR yes 118483985
chr1 234749412 234749422 MEF2A JASPAR yes 118483986
chr1 234749424 234749437 ATF4 JASPAR yes 118483987
chr1 234749425 234749436 CEBPA JASPAR yes 118483988
chr1 234749426 234749437 CEBPB JASPAR yes 118483989
chr1 234749450 234749465 HNF4A JASPAR yes 118483990
chr1 234749451 234749465 NR2F1 JASPAR yes 118483991
chr1 234749451 234749465 RXRG JASPAR yes 118483992
chr1 234749451 234749466 HNF4G JASPAR yes 118483993
chr1 234749451 234749466 LEF1 JASPAR yes 118483994
chr1 234749451 234749466 NR2C2 JASPAR yes 118483995
chr1 234749469 234749473 YY1 TRANSFAC yes 118483996
chr1 234749497 234749501 YY1 TRANSFAC yes 118483997
chr1 234749508 234749513 H4TF1 TRANSFAC yes 118483998
chr1 234749543 234749549 NFIC JASPAR yes 118483999
chr1 234749559 234749570 TBX20 JASPAR yes 118484000
chr1 234749571 234749581 MAX JASPAR yes 118484001
chr1 234749572 234749582 BHLHE40 JASPAR yes 118484002
chr1 234749572 234749582 BHLHE41 JASPAR yes 118484003
chr1 234749572 234749582 MAX JASPAR yes 118484004
chr1 234749572 234749582 MLXIPL JASPAR yes 118484005
chr1 234749572 234749582 MNT JASPAR yes 118484006
chr1 234749572 234749582 SREBF2 JASPAR yes 118484007
chr1 234749572 234749582 TFE3 JASPAR yes 118484008
chr1 234749572 234749582 TFEB JASPAR yes 118484009
chr1 234749572 234749582 TFEC JASPAR yes 118484010
chr1 234749573 234749583 MAX JASPAR yes 118484011
chr1 234749574 234749579 MYC TRANSFAC yes 118484012
chr1 234749574 234749579 USF1 TRANSFAC yes 118484013
chr1 234749574 234749579 USF2 TRANSFAC yes 118484014
chr1 234749587 234749597 REL JASPAR yes 118484015
chr1 234749587 234749598 NFKB1 JASPAR yes 118484016
chr1 234749591 234749598 NFATC2 JASPAR yes 118484017
chr1 234749595 234749599 H1TF2 TRANSFAC yes 118484018
chr1 234749595 234749599 NFE TRANSFAC yes 118484019
chr1 234749595 234749599 SRF TRANSFAC yes 118484020
chr1 234749604 234749615 PROP1 JASPAR yes 118484021
chr1 234749612 234749622 MEF2A JASPAR yes 118484022
chr1 234749613 234749621 FOXL1 JASPAR yes 118484023
chr1 234749619 234749623 YY1 TRANSFAC yes 118484024
chr1 234749629 234749633 YY1 TRANSFAC yes 118484025
chr1 234749630 234749642 FOXI1 JASPAR yes 118484026
chr1 234749630 234749645 FOXP1 JASPAR yes 118484027
chr1 234749631 234749642 FOXP2 JASPAR yes 118484028
chr1 234749631 234749643 FOXC2 JASPAR yes 118484029
chr1 234749632 234749640 FOXG1 JASPAR yes 118484030
chr1 234749632 234749640 FOXO3 JASPAR yes 118484031
SNP sites on vista5621[chr1:234749342-234749645]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234749388 rs143446863 G A
CEBPB POLR2A
1044074
chr1 234749467 rs117564359 G T
CEBPB POLR2A
1044075
chr1 234749605 rs12076120 T A
CEBPB POLR2A PROP1
1044076
chr1 234749619 rs147335077 A G
CEBPB FOXL1 MEF2A POLR2A YY1
1044077
Genes possibly regulated by vista5621[chr1:234749342-234749645]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 234740015 234745271 - IRF2BP2 ENSG00000168264.6 234745271 0.68 1.0 1964 95929
Expression level of Genes
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miRNAs possibly regulated by vista5621[chr1:234749342-234749645]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results