EnhancerDB
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  3. vista5627[chr1:234793934-234794239]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5627[chr1:234793934-234794239]
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Tissue distribution of vista5627
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Transcription factor that possibly regulate vista5627[chr1:234793934-234794239]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234792446 234794176 POLR2A UCSC Txn Factor no Conserved 107881373
chr1 234792446 234794176 POLR2A UCSC Txn Factor no Conserved 107881374
chr1 234793901 234794235 TFAP2C UCSC Txn Factor no Conserved 107881424
chr1 234793909 234794239 EP300 UCSC Txn Factor no Conserved 107881427
chr1 234793937 234794208 CEBPB UCSC Txn Factor no Conserved 107881433
chr1 234793938 234794185 TFAP2A UCSC Txn Factor no Conserved 107881434
chr1 234793934 234793939 TFAP2A TRANSFAC yes 36299696
chr1 234793934 234793939 TFAP2A TRANSFAC yes 118484324
chr1 234793934 234793940 MZF1 JASPAR yes 36299697
chr1 234793934 234793940 MZF1 JASPAR yes 118484325
chr1 234793937 234793943 PEA3 TRANSFAC yes 36299698
chr1 234793937 234793943 PEA3 TRANSFAC yes 118484326
chr1 234793940 234793950 RELA JASPAR yes 36299699
chr1 234793940 234793950 REL JASPAR yes 36299700
chr1 234793940 234793950 RELA JASPAR yes 118484327
chr1 234793940 234793950 REL JASPAR yes 118484328
chr1 234793944 234793949 GATA2 JASPAR yes 36299701
chr1 234793944 234793949 GATA2 JASPAR yes 118484329
chr1 234793961 234793975 SPI1 JASPAR yes 36299702
chr1 234793961 234793975 SPIC JASPAR yes 36299703
chr1 234793961 234793975 SPI1 JASPAR yes 118484330
chr1 234793961 234793975 SPIC JASPAR yes 118484331
chr1 234793966 234793973 PEA3 TRANSFAC yes 36299704
chr1 234793966 234793973 PEA3 TRANSFAC yes 118484332
chr1 234793985 234794006 MAFG JASPAR yes 36299705
chr1 234793985 234794006 MAFG JASPAR yes 118484333
chr1 234793990 234794008 MAFF JASPAR yes 36299706
chr1 234793990 234794008 MAFF JASPAR yes 118484334
chr1 234793991 234794006 MAFK JASPAR yes 36299707
chr1 234793991 234794006 MAFK JASPAR yes 118484335
chr1 234793995 234794006 NRL JASPAR yes 36299708
chr1 234793995 234794006 NRL JASPAR yes 118484336
chr1 234794030 234794040 TFCP2 JASPAR yes 36299709
chr1 234794030 234794040 TFCP2 JASPAR yes 118484337
chr1 234794040 234794055 RFX5 JASPAR yes 36299710
chr1 234794040 234794055 RFX5 JASPAR yes 118484338
chr1 234794045 234794062 BCL6B JASPAR yes 36299711
chr1 234794045 234794062 BCL6B JASPAR yes 118484339
chr1 234794057 234794072 TFAP2C JASPAR yes 36299712
chr1 234794057 234794072 TFAP2C JASPAR yes 118484340
chr1 234794060 234794071 EBF1 JASPAR yes 36299713
chr1 234794060 234794071 EBF1 JASPAR yes 118484341
chr1 234794067 234794072 ETS2 TRANSFAC yes 36299714
chr1 234794067 234794072 ETS2 TRANSFAC yes 118484342
chr1 234794069 234794082 SCRT2 JASPAR yes 36299715
chr1 234794069 234794082 SCRT2 JASPAR yes 118484343
chr1 234794074 234794085 CEBPB JASPAR yes 36299716
chr1 234794074 234794085 CEBPB JASPAR yes 118484344
chr1 234794075 234794086 CEBPA JASPAR yes 36299717
chr1 234794075 234794086 CEBPA JASPAR yes 118484345
chr1 234794079 234794088 PITX3 JASPAR yes 36299718
chr1 234794079 234794088 PITX3 JASPAR yes 118484346
chr1 234794079 234794089 GSC2 JASPAR yes 36299719
chr1 234794079 234794089 GSC JASPAR yes 36299720
chr1 234794079 234794089 GSC2 JASPAR yes 118484347
chr1 234794079 234794089 GSC JASPAR yes 118484348
chr1 234794080 234794088 OTX1 JASPAR yes 36299721
chr1 234794080 234794088 OTX2 JASPAR yes 36299722
chr1 234794080 234794088 OTX1 JASPAR yes 118484349
chr1 234794080 234794088 OTX2 JASPAR yes 118484350
chr1 234794084 234794105 ZNF263 JASPAR yes 36299723
chr1 234794084 234794105 ZNF263 JASPAR yes 118484351
chr1 234794112 234794127 HNF4A JASPAR yes 36299724
chr1 234794112 234794127 HNF4A JASPAR yes 118484352
chr1 234794116 234794122 SOX10 JASPAR yes 36299725
chr1 234794116 234794122 SOX10 JASPAR yes 118484353
chr1 234794142 234794151 ZEB1 JASPAR yes 36299726
chr1 234794142 234794151 ZEB1 JASPAR yes 118484354
chr1 234794143 234794163 ESR1 JASPAR yes 36299727
chr1 234794143 234794163 ESR1 JASPAR yes 118484355
chr1 234794146 234794164 ESR2 JASPAR yes 36299728
chr1 234794146 234794164 ESR2 JASPAR yes 118484356
chr1 234794148 234794163 ESR2 JASPAR yes 36299729
chr1 234794148 234794163 ESR2 JASPAR yes 118484357
chr1 234794148 234794168 ESR1 JASPAR yes 36299730
chr1 234794148 234794168 ESR1 JASPAR yes 118484358
chr1 234794181 234794189 OTX2 JASPAR yes 36299731
chr1 234794181 234794189 OTX2 JASPAR yes 118484359
chr1 234794220 234794227 PEA3 TRANSFAC yes 36299732
chr1 234794220 234794227 PEA3 TRANSFAC yes 118484360
SNP sites on vista5627[chr1:234793934-234794239]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234793959 rs10910481 T C
CEBPB EP300 POLR2A TFAP2A TFAP2C
1044647
chr1 234794047 rs143500074 G A
BCL6B CEBPB EP300 POLR2A RFX5 TFAP2A TFAP2C
1044648
chr1 234794155 rs147178395 G A
CEBPB EP300 ESR1 ESR2 POLR2A TFAP2A TFAP2C
1044649
Genes possibly regulated by vista5627[chr1:234793934-234794239]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 234740015 234745271 - IRF2BP2 ENSG00000168264.6 234745271 0.68 1.0 1964 51337
Expression level of Genes
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miRNAs possibly regulated by vista5627[chr1:234793934-234794239]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results