EnhancerDB
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  3. vista5628[chr1:234812067-234812214]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5628[chr1:234812067-234812214]
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Tissue distribution of vista5628
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Transcription factor that possibly regulate vista5628[chr1:234812067-234812214]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234811991 234812281 ZNF143 UCSC Txn Factor no Conserved 107881486
chr1 234812019 234812273 SIX5 UCSC Txn Factor no Conserved 107881494
chr1 234812030 234812265 RUNX3 UCSC Txn Factor no Conserved 107881496
chr1 234812060 234812276 FOXA1 UCSC Txn Factor no Conserved 107881503
chr1 234812081 234812267 FOXA2 UCSC Txn Factor no Conserved 107881507
chr1 234812073 234812091 NFYA JASPAR yes 36301522
chr1 234812073 234812091 NFYA JASPAR yes 118484361
chr1 234812077 234812093 ZNF143 JASPAR yes 36301523
chr1 234812077 234812093 ZNF143 JASPAR yes 118484362
chr1 234812081 234812095 E2F7 JASPAR yes 36301524
chr1 234812081 234812095 E2F7 JASPAR yes 118484363
chr1 234812085 234812090 SP1 TRANSFAC yes 36301525
chr1 234812085 234812090 SP1 TRANSFAC yes 118484364
chr1 234812106 234812119 NFKB1 JASPAR yes 36301526
chr1 234812106 234812119 NFKB1 JASPAR yes 118484365
chr1 234812107 234812118 NFKB1 JASPAR yes 36301527
chr1 234812107 234812118 NFKB1 JASPAR yes 118484366
chr1 234812108 234812113 ETS2 TRANSFAC yes 36301528
chr1 234812108 234812113 ETS2 TRANSFAC yes 118484367
chr1 234812108 234812118 NFKB1 JASPAR yes 36301529
chr1 234812108 234812118 RELA JASPAR yes 36301530
chr1 234812108 234812118 NFKB1 JASPAR yes 118484368
chr1 234812108 234812118 RELA JASPAR yes 118484369
chr1 234812108 234812119 NFKB1 JASPAR yes 36301531
chr1 234812108 234812119 NFKB1 JASPAR yes 118484370
chr1 234812118 234812124 PEA3 TRANSFAC yes 36301532
chr1 234812118 234812124 PEA3 TRANSFAC yes 118484371
chr1 234812136 234812156 TP53 JASPAR yes 36301533
chr1 234812136 234812156 TP53 JASPAR yes 118484372
chr1 234812140 234812154 GLIS2 JASPAR yes 36301534
chr1 234812140 234812154 GLIS2 JASPAR yes 118484373
chr1 234812171 234812185 FOXF2 JASPAR yes 36301535
chr1 234812171 234812185 FOXF2 JASPAR yes 118484374
chr1 234812171 234812186 FOXP1 JASPAR yes 36301536
chr1 234812171 234812186 FOXP1 JASPAR yes 118484375
chr1 234812174 234812185 FOXP2 JASPAR yes 36301537
chr1 234812174 234812185 FOXP2 JASPAR yes 118484376
chr1 234812175 234812183 FOXO3 JASPAR yes 36301538
chr1 234812175 234812183 FOXO3 JASPAR yes 118484377
chr1 234812176 234812183 FOXD2 JASPAR yes 36301539
chr1 234812176 234812183 FOXI1 JASPAR yes 36301540
chr1 234812176 234812183 FOXL1 JASPAR yes 36301541
chr1 234812176 234812183 FOXO4 JASPAR yes 36301542
chr1 234812176 234812183 FOXO6 JASPAR yes 36301543
chr1 234812176 234812183 FOXP3 JASPAR yes 36301544
chr1 234812176 234812183 FOXD2 JASPAR yes 118484378
chr1 234812176 234812183 FOXI1 JASPAR yes 118484379
chr1 234812176 234812183 FOXL1 JASPAR yes 118484380
chr1 234812176 234812183 FOXO4 JASPAR yes 118484381
chr1 234812176 234812183 FOXO6 JASPAR yes 118484382
chr1 234812176 234812183 FOXP3 JASPAR yes 118484383
chr1 234812176 234812184 FOXD1 JASPAR yes 36301545
chr1 234812176 234812184 FOXG1 JASPAR yes 36301546
chr1 234812176 234812184 FOXO3 JASPAR yes 36301547
chr1 234812176 234812184 FOXD1 JASPAR yes 118484384
chr1 234812176 234812184 FOXG1 JASPAR yes 118484385
chr1 234812176 234812184 FOXO3 JASPAR yes 118484386
chr1 234812187 234812206 REST JASPAR yes 36301548
chr1 234812187 234812206 REST JASPAR yes 118484387
chr1 234812199 234812206 SPIB JASPAR yes 36301549
chr1 234812199 234812206 SPIB JASPAR yes 118484388
SNP sites on vista5628[chr1:234812067-234812214]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234812078 rs371170987 T TGGTG
FOXA1 NFYA RUNX3 SIX5 ZNF143
1044852
chr1 234812119 rs148157689 G A
FOXA1 FOXA2 NFKB1 PEA3 RUNX3 SIX5 ZNF143
1044853
Genes possibly regulated by vista5628[chr1:234812067-234812214]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 234740015 234745271 - IRF2BP2 ENSG00000168264.6 234745271 0.68 1.0 1964 33204
Expression level of Genes
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miRNAs possibly regulated by vista5628[chr1:234812067-234812214]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results