EnhancerDB
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  3. vista563[chr1:17578205-17578469]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista563[chr1:17578205-17578469]
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Tissue distribution of vista563
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Transcription factor that possibly regulate vista563[chr1:17578205-17578469]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 17578217 17578223 TCF4 TRANSFAC yes 27081314
chr1 17578217 17578223 TCF4 TRANSFAC yes 118240719
chr1 17578226 17578236 HMBOX1 JASPAR yes 27081315
chr1 17578226 17578236 HMBOX1 JASPAR yes 118240720
chr1 17578228 17578231 MYB TRANSFAC yes 27081316
chr1 17578228 17578231 MYB TRANSFAC yes 118240721
chr1 17578237 17578252 RUNX2 JASPAR yes 27081317
chr1 17578237 17578252 RUNX2 JASPAR yes 118240722
chr1 17578241 17578251 RUNX3 JASPAR yes 27081318
chr1 17578241 17578251 RUNX3 JASPAR yes 118240723
chr1 17578260 17578272 MYBL1 JASPAR yes 27081319
chr1 17578260 17578272 MYBL1 JASPAR yes 118240724
chr1 17578262 17578274 PKNOX1 JASPAR yes 27081320
chr1 17578262 17578274 PKNOX1 JASPAR yes 118240725
chr1 17578265 17578268 MYB TRANSFAC yes 27081321
chr1 17578265 17578268 MYB TRANSFAC yes 118240726
chr1 17578268 17578272 NFE TRANSFAC yes 27081322
chr1 17578268 17578272 NFE TRANSFAC yes 118240727
chr1 17578275 17578279 YY1 TRANSFAC yes 27081323
chr1 17578275 17578279 YY1 TRANSFAC yes 118240728
chr1 17578300 17578306 SOX10 JASPAR yes 27081324
chr1 17578300 17578306 SOX10 JASPAR yes 118240729
chr1 17578321 17578332 TFAP2A JASPAR yes 27081325
chr1 17578321 17578332 TFAP2B JASPAR yes 27081326
chr1 17578321 17578332 TFAP2C JASPAR yes 27081327
chr1 17578321 17578332 TFAP2A JASPAR yes 118240730
chr1 17578321 17578332 TFAP2B JASPAR yes 118240731
chr1 17578321 17578332 TFAP2C JASPAR yes 118240732
chr1 17578332 17578338 MZF1 JASPAR yes 27081328
chr1 17578332 17578338 MZF1 JASPAR yes 118240733
chr1 17578343 17578353 BHLHE22 JASPAR yes 27081329
chr1 17578343 17578353 NEUROD2 JASPAR yes 27081330
chr1 17578343 17578353 BHLHE22 JASPAR yes 118240734
chr1 17578343 17578353 NEUROD2 JASPAR yes 118240735
chr1 17578351 17578358 PEA3 TRANSFAC yes 27081331
chr1 17578351 17578358 PEA3 TRANSFAC yes 118240736
chr1 17578360 17578365 TFAP2A TRANSFAC yes 27081332
chr1 17578360 17578365 TFAP2A TRANSFAC yes 118240737
chr1 17578360 17578366 MZF1 JASPAR yes 27081333
chr1 17578360 17578366 MZF1 JASPAR yes 118240738
chr1 17578386 17578407 ZNF263 JASPAR yes 27081334
chr1 17578386 17578407 ZNF263 JASPAR yes 118240739
chr1 17578389 17578410 ZNF263 JASPAR yes 27081335
chr1 17578389 17578410 ZNF263 JASPAR yes 118240740
chr1 17578396 17578417 IRF1 JASPAR yes 27081336
chr1 17578396 17578417 IRF1 JASPAR yes 118240741
chr1 17578400 17578415 PRDM1 JASPAR yes 27081337
chr1 17578400 17578415 STAT2 JASPAR yes 27081338
chr1 17578400 17578415 PRDM1 JASPAR yes 118240742
chr1 17578400 17578415 STAT2 JASPAR yes 118240743
chr1 17578408 17578420 POU3F1 JASPAR yes 27081339
chr1 17578408 17578420 POU3F2 JASPAR yes 27081340
chr1 17578408 17578420 POU3F1 JASPAR yes 118240744
chr1 17578408 17578420 POU3F2 JASPAR yes 118240745
chr1 17578408 17578421 POU3F3 JASPAR yes 27081341
chr1 17578408 17578421 POU3F3 JASPAR yes 118240746
chr1 17578413 17578427 JUN JASPAR yes 27081342
chr1 17578413 17578427 JUN JASPAR yes 118240747
chr1 17578415 17578426 BATF JASPAR yes 27081343
chr1 17578415 17578426 BATF JASPAR yes 118240748
chr1 17578417 17578428 FOS JASPAR yes 27081344
chr1 17578417 17578428 FOSL1 JASPAR yes 27081345
chr1 17578417 17578428 JUND JASPAR yes 27081346
chr1 17578417 17578428 FOS JASPAR yes 118240749
chr1 17578417 17578428 FOSL1 JASPAR yes 118240750
chr1 17578417 17578428 JUND JASPAR yes 118240751
chr1 17578418 17578427 JDP2 JASPAR yes 27081347
chr1 17578418 17578427 JDP2 JASPAR yes 118240752
chr1 17578418 17578429 FOSL2 JASPAR yes 27081348
chr1 17578418 17578429 JUNB JASPAR yes 27081349
chr1 17578418 17578429 FOSL2 JASPAR yes 118240753
chr1 17578418 17578429 JUNB JASPAR yes 118240754
chr1 17578424 17578438 JUN JASPAR yes 27081350
chr1 17578424 17578438 JUN JASPAR yes 118240755
chr1 17578426 17578437 BATF JASPAR yes 27081351
chr1 17578426 17578437 BATF JASPAR yes 118240756
chr1 17578427 17578438 FOSL2 JASPAR yes 27081352
chr1 17578427 17578438 JUNB JASPAR yes 27081353
chr1 17578427 17578438 NFE2L2 JASPAR yes 27081354
chr1 17578427 17578438 FOSL2 JASPAR yes 118240757
chr1 17578427 17578438 JUNB JASPAR yes 118240758
chr1 17578427 17578438 NFE2L2 JASPAR yes 118240759
chr1 17578428 17578439 FOS JASPAR yes 27081355
chr1 17578428 17578439 FOSL1 JASPAR yes 27081356
chr1 17578428 17578439 JUND JASPAR yes 27081357
chr1 17578428 17578439 FOS JASPAR yes 118240760
chr1 17578428 17578439 FOSL1 JASPAR yes 118240761
chr1 17578428 17578439 JUND JASPAR yes 118240762
chr1 17578430 17578437 JUN TRANSFAC yes 27081358
chr1 17578430 17578437 JUN TRANSFAC yes 118240763
chr1 17578434 17578443 THAP1 JASPAR yes 27081359
chr1 17578434 17578443 THAP1 JASPAR yes 118240764
chr1 17578437 17578441 LFA1 TRANSFAC yes 27081360
chr1 17578437 17578441 LFA1 TRANSFAC yes 118240765
chr1 17578442 17578452 GABPA JASPAR yes 27081361
chr1 17578442 17578452 GABPA JASPAR yes 118240766
chr1 17578450 17578460 SP1 JASPAR yes 27081362
chr1 17578450 17578460 SP1 JASPAR yes 118240767
chr1 17578451 17578458 CEBPA TRANSFAC yes 27081363
chr1 17578451 17578458 CEBPA TRANSFAC yes 118240768
chr1 17578455 17578470 NFYB JASPAR yes 27081364
chr1 17578455 17578470 NFYB JASPAR yes 118240769
chr1 17578457 17578461 LFA1 TRANSFAC yes 27081365
chr1 17578457 17578461 LFA1 TRANSFAC yes 118240770
chr1 17578457 17578473 NFYA JASPAR yes 27081366
chr1 17578457 17578473 NFYA JASPAR yes 118240771
chr1 17578458 17578476 NFYA JASPAR yes 27081367
chr1 17578458 17578476 NFYA JASPAR yes 118240772
chr1 17578459 17578471 PBX1 JASPAR yes 27081368
chr1 17578459 17578471 PBX1 JASPAR yes 118240773
chr1 17578462 17578466 H1TF2 TRANSFAC yes 27081369
chr1 17578462 17578466 NFE TRANSFAC yes 27081370
chr1 17578462 17578466 SRF TRANSFAC yes 27081371
chr1 17578462 17578466 H1TF2 TRANSFAC yes 118240774
chr1 17578462 17578466 NFE TRANSFAC yes 118240775
chr1 17578462 17578466 SRF TRANSFAC yes 118240776
SNP sites on vista563[chr1:17578205-17578469]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 17578365 rs4920579 G A
MZF1 TFAP2A
117282
chr1 17578381 rs191059951 G A no 117283
chr1 17578419 rs4920580 C T
BATF FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND POU3F1 POU3F2 POU3F3
117284
Genes possibly regulated by vista563[chr1:17578205-17578469]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 17531621 17572500 + PADI1 ENSG00000142623.8 17531621 1.0 0.97 242 53416
chr1 17575593 17610728 + PADI3 ENSG00000142619.4 17575593 0.97 0.99 243 97388
chr1 17634690 17690499 + PADI4 ENSG00000159339.9 17634690 0.97 1.0 244 43779
chr1 17655507 17676070 - AC004824.2 ENSG00000269468.1 17676070 0.96 1.0 245 2399
Expression level of Genes
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miRNAs possibly regulated by vista563[chr1:17578205-17578469]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results