EnhancerDB
  1. Home
  2. Enhancers
  3. vista5644[chr1:234972080-234972525]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5644[chr1:234972080-234972525]
Back to top
Tissue distribution of vista5644
Back to top
Transcription factor that possibly regulate vista5644[chr1:234972080-234972525]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234972076 234972080 YY1 TRANSFAC yes 36318514
chr1 234972076 234972080 YY1 TRANSFAC yes 118485147
chr1 234972104 234972108 NFE TRANSFAC yes 36318515
chr1 234972104 234972108 NFE TRANSFAC yes 118485148
chr1 234972109 234972130 ZNF263 JASPAR yes 36318516
chr1 234972109 234972130 ZNF263 JASPAR yes 118485149
chr1 234972117 234972121 NFE TRANSFAC yes 36318517
chr1 234972117 234972121 NFE TRANSFAC yes 118485150
chr1 234972119 234972129 SREBF1 JASPAR yes 36318518
chr1 234972119 234972129 SREBF2 JASPAR yes 36318519
chr1 234972119 234972129 SREBF1 JASPAR yes 118485151
chr1 234972119 234972129 SREBF2 JASPAR yes 118485152
chr1 234972126 234972130 YY1 TRANSFAC yes 36318520
chr1 234972126 234972130 YY1 TRANSFAC yes 118485153
chr1 234972151 234972157 JUN TRANSFAC yes 36318521
chr1 234972151 234972157 JUN TRANSFAC yes 118485154
chr1 234972154 234972174 ESR1 JASPAR yes 36318522
chr1 234972154 234972174 ESR1 JASPAR yes 118485155
chr1 234972158 234972167 HIC2 JASPAR yes 36318523
chr1 234972158 234972167 HIC2 JASPAR yes 118485156
chr1 234972159 234972174 ESR2 JASPAR yes 36318524
chr1 234972159 234972174 ESR2 JASPAR yes 118485157
chr1 234972170 234972180 SP1 JASPAR yes 36318525
chr1 234972170 234972180 SP1 JASPAR yes 118485158
chr1 234972176 234972187 ELK4 JASPAR yes 36318526
chr1 234972176 234972187 FLI1 JASPAR yes 36318527
chr1 234972176 234972187 ELK4 JASPAR yes 118485159
chr1 234972176 234972187 FLI1 JASPAR yes 118485160
chr1 234972177 234972187 ETV6 JASPAR yes 36318528
chr1 234972177 234972187 GABPA JASPAR yes 36318529
chr1 234972177 234972187 ETV6 JASPAR yes 118485161
chr1 234972177 234972187 GABPA JASPAR yes 118485162
chr1 234972177 234972190 ELF1 JASPAR yes 36318530
chr1 234972177 234972190 ELF1 JASPAR yes 118485163
chr1 234972178 234972185 SPI1 JASPAR yes 36318531
chr1 234972178 234972185 SPI1 JASPAR yes 118485164
chr1 234972178 234972186 EHF JASPAR yes 36318532
chr1 234972178 234972186 EHF JASPAR yes 118485165
chr1 234972180 234972187 SPIB JASPAR yes 36318533
chr1 234972180 234972187 SPIB JASPAR yes 118485166
chr1 234972191 234972195 TEAD2 TRANSFAC yes 36318534
chr1 234972191 234972195 TEAD2 TRANSFAC yes 118485167
chr1 234972199 234972203 LFA1 TRANSFAC yes 36318535
chr1 234972199 234972203 LFA1 TRANSFAC yes 118485168
chr1 234972210 234972216 SOX10 JASPAR yes 36318536
chr1 234972210 234972216 SOX10 JASPAR yes 118485169
chr1 234972269 234972281 POU2F1 JASPAR yes 36318537
chr1 234972269 234972281 POU2F1 JASPAR yes 118485170
chr1 234972269 234972283 POU1F1 JASPAR yes 36318538
chr1 234972269 234972283 POU1F1 JASPAR yes 118485171
chr1 234972269 234972287 TP53 JASPAR yes 36318539
chr1 234972269 234972287 TP53 JASPAR yes 118485172
chr1 234972270 234972282 POU3F1 JASPAR yes 36318540
chr1 234972270 234972282 POU3F2 JASPAR yes 36318541
chr1 234972270 234972282 POU3F1 JASPAR yes 118485173
chr1 234972270 234972282 POU3F2 JASPAR yes 118485174
chr1 234972270 234972283 POU2F2 JASPAR yes 36318542
chr1 234972270 234972283 POU2F2 JASPAR yes 118485175
chr1 234972270 234972290 TP53 JASPAR yes 36318543
chr1 234972270 234972290 TP53 JASPAR yes 118485176
chr1 234972271 234972279 FOXL1 JASPAR yes 36318544
chr1 234972271 234972279 FOXL1 JASPAR yes 118485177
chr1 234972271 234972280 POU3F4 JASPAR yes 36318545
chr1 234972271 234972280 POU5F1B JASPAR yes 36318546
chr1 234972271 234972280 POU3F4 JASPAR yes 118485178
chr1 234972271 234972280 POU5F1B JASPAR yes 118485179
chr1 234972271 234972286 TP53 JASPAR yes 36318547
chr1 234972271 234972286 TP53 JASPAR yes 118485180
chr1 234972289 234972293 YY1 TRANSFAC yes 36318548
chr1 234972289 234972293 YY1 TRANSFAC yes 118485181
chr1 234972292 234972296 YY1 TRANSFAC yes 36318549
chr1 234972292 234972296 YY1 TRANSFAC yes 118485182
chr1 234972307 234972310 MYB TRANSFAC yes 36318550
chr1 234972307 234972310 MYB TRANSFAC yes 118485183
chr1 234972307 234972327 RREB1 JASPAR yes 36318551
chr1 234972307 234972327 RREB1 JASPAR yes 118485184
chr1 234972309 234972329 RREB1 JASPAR yes 36318552
chr1 234972309 234972329 RREB1 JASPAR yes 118485185
chr1 234972321 234972335 ZIC1 JASPAR yes 36318553
chr1 234972321 234972335 ZIC1 JASPAR yes 118485186
chr1 234972321 234972336 ZIC3 JASPAR yes 36318554
chr1 234972321 234972336 ZIC4 JASPAR yes 36318555
chr1 234972321 234972336 ZIC3 JASPAR yes 118485187
chr1 234972321 234972336 ZIC4 JASPAR yes 118485188
chr1 234972351 234972370 REST JASPAR yes 36318556
chr1 234972351 234972370 REST JASPAR yes 118485189
chr1 234972363 234972368 H4TF1 TRANSFAC yes 36318557
chr1 234972363 234972368 H4TF1 TRANSFAC yes 118485190
chr1 234972372 234972386 PLAG1 JASPAR yes 36318558
chr1 234972372 234972386 PLAG1 JASPAR yes 118485191
chr1 234972374 234972378 LFA1 TRANSFAC yes 36318559
chr1 234972374 234972378 LFA1 TRANSFAC yes 118485192
chr1 234972377 234972391 SPIC JASPAR yes 36318560
chr1 234972377 234972391 SPIC JASPAR yes 118485193
chr1 234972380 234972401 IRF1 JASPAR yes 36318561
chr1 234972380 234972401 IRF1 JASPAR yes 118485194
chr1 234972399 234972414 PRDM1 JASPAR yes 36318562
chr1 234972399 234972414 PRDM1 JASPAR yes 118485195
chr1 234972404 234972414 NFKB1 JASPAR yes 36318563
chr1 234972404 234972414 NFKB1 JASPAR yes 118485196
chr1 234972404 234972415 NFKB1 JASPAR yes 36318564
chr1 234972404 234972415 NFKB1 JASPAR yes 118485197
chr1 234972405 234972415 RELA JASPAR yes 36318565
chr1 234972405 234972415 REL JASPAR yes 36318566
chr1 234972405 234972415 RELA JASPAR yes 118485198
chr1 234972405 234972415 REL JASPAR yes 118485199
chr1 234972417 234972438 IRF1 JASPAR yes 36318567
chr1 234972417 234972438 IRF1 JASPAR yes 118485200
chr1 234972420 234972434 IRF7 JASPAR yes 36318568
chr1 234972420 234972434 IRF7 JASPAR yes 118485201
chr1 234972421 234972436 STAT2 JASPAR yes 36318569
chr1 234972421 234972436 STAT2 JASPAR yes 118485202
chr1 234972431 234972446 TFAP2A JASPAR yes 36318570
chr1 234972431 234972446 TFAP2C JASPAR yes 36318571
chr1 234972431 234972446 TFAP2A JASPAR yes 118485203
chr1 234972431 234972446 TFAP2C JASPAR yes 118485204
chr1 234972433 234972438 ETS2 TRANSFAC yes 36318572
chr1 234972433 234972438 ETS2 TRANSFAC yes 118485205
chr1 234972439 234972457 ESR2 JASPAR yes 36318573
chr1 234972439 234972457 ESR2 JASPAR yes 118485206
chr1 234972449 234972459 MAX JASPAR yes 36318574
chr1 234972449 234972459 MAX JASPAR yes 118485207
chr1 234972449 234972460 USF1 JASPAR yes 36318575
chr1 234972449 234972460 USF1 JASPAR yes 118485208
chr1 234972449 234972461 HES5 JASPAR yes 36318576
chr1 234972449 234972461 PKNOX1 JASPAR yes 36318577
chr1 234972449 234972461 PKNOX2 JASPAR yes 36318578
chr1 234972449 234972461 HES5 JASPAR yes 118485209
chr1 234972449 234972461 PKNOX1 JASPAR yes 118485210
chr1 234972449 234972461 PKNOX2 JASPAR yes 118485211
chr1 234972469 234972477 TBX5 JASPAR yes 36318579
chr1 234972469 234972477 TBX5 JASPAR yes 118485212
chr1 234972470 234972485 RFX5 JASPAR yes 36318580
chr1 234972470 234972485 RFX5 JASPAR yes 118485213
chr1 234972472 234972490 SRF JASPAR yes 36318581
chr1 234972472 234972490 SRF JASPAR yes 118485214
chr1 234972492 234972504 FOXI1 JASPAR yes 36318582
chr1 234972492 234972504 FOXI1 JASPAR yes 118485215
chr1 234972495 234972499 YY1 TRANSFAC yes 36318583
chr1 234972495 234972499 YY1 TRANSFAC yes 118485216
chr1 234972500 234972505 GATA2 JASPAR yes 36318584
chr1 234972500 234972505 GATA2 JASPAR yes 118485217
chr1 234972516 234972519 MYB TRANSFAC yes 36318585
chr1 234972516 234972519 MYB TRANSFAC yes 118485218
chr1 234972520 234972530 NKX2-3 JASPAR yes 36318586
chr1 234972520 234972530 NKX2-3 JASPAR yes 118485219
SNP sites on vista5644[chr1:234972080-234972525]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234972185 rs141182514 T A
EHF ELF1 ELK4 ETV6 FLI1 GABPA SPI1 SPIB
1046593
chr1 234972448 rs146961467 C T
ESR2
1046594
chr1 234972489 rs10910512 G A
SRF
1046595
chr1 234972511 rs143396456 C T no 1046596
Genes possibly regulated by vista5644[chr1:234972080-234972525]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
Back to top
No results
miRNAs possibly regulated by vista5644[chr1:234972080-234972525]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results