EnhancerDB
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  3. vista5646[chr1:234977482-234978011]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5646[chr1:234977482-234978011]
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Tissue distribution of vista5646
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Transcription factor that possibly regulate vista5646[chr1:234977482-234978011]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234977507 234977856 RUNX3 UCSC Txn Factor no Conserved 107882285
chr1 234977528 234977831 SPI1 UCSC Txn Factor no Conserved 107882288
chr1 234977487 234977491 YY1 TRANSFAC yes 36319360
chr1 234977487 234977491 YY1 TRANSFAC yes 118485260
chr1 234977490 234977493 MYB TRANSFAC yes 36319361
chr1 234977490 234977493 MYB TRANSFAC yes 118485261
chr1 234977490 234977504 NR2F1 JASPAR yes 36319362
chr1 234977490 234977504 RXRG JASPAR yes 36319363
chr1 234977490 234977504 NR2F1 JASPAR yes 118485262
chr1 234977490 234977504 RXRG JASPAR yes 118485263
chr1 234977490 234977505 NR2C2 JASPAR yes 36319364
chr1 234977490 234977505 NR2C2 JASPAR yes 118485264
chr1 234977522 234977525 MYB TRANSFAC yes 36319365
chr1 234977522 234977525 MYB TRANSFAC yes 118485265
chr1 234977530 234977541 EBF1 JASPAR yes 36319366
chr1 234977530 234977541 EBF1 JASPAR yes 118485266
chr1 234977554 234977566 PKNOX1 JASPAR yes 36319367
chr1 234977554 234977566 PKNOX2 JASPAR yes 36319368
chr1 234977554 234977566 TGIF1 JASPAR yes 36319369
chr1 234977554 234977566 PKNOX1 JASPAR yes 118485267
chr1 234977554 234977566 PKNOX2 JASPAR yes 118485268
chr1 234977554 234977566 TGIF1 JASPAR yes 118485269
chr1 234977561 234977565 TEAD2 TRANSFAC yes 36319370
chr1 234977561 234977565 TEAD2 TRANSFAC yes 118485270
chr1 234977563 234977566 MYB TRANSFAC yes 36319371
chr1 234977563 234977566 MYB TRANSFAC yes 118485271
chr1 234977567 234977577 SREBF1 JASPAR yes 36319372
chr1 234977567 234977577 SREBF2 JASPAR yes 36319373
chr1 234977567 234977577 SREBF1 JASPAR yes 118485272
chr1 234977567 234977577 SREBF2 JASPAR yes 118485273
chr1 234977581 234977595 SPIC JASPAR yes 36319374
chr1 234977581 234977595 SPIC JASPAR yes 118485274
chr1 234977597 234977607 RORA JASPAR yes 36319375
chr1 234977597 234977607 RORA JASPAR yes 118485275
chr1 234977599 234977617 ESR2 JASPAR yes 36319376
chr1 234977599 234977617 ESR2 JASPAR yes 118485276
chr1 234977602 234977606 ESR1 TRANSFAC yes 36319377
chr1 234977602 234977606 ESR1 TRANSFAC yes 118485277
chr1 234977612 234977626 SPI1 JASPAR yes 36319378
chr1 234977612 234977626 SPI1 JASPAR yes 118485278
chr1 234977616 234977635 RFX2 JASPAR yes 36319379
chr1 234977616 234977635 RFX2 JASPAR yes 118485279
chr1 234977620 234977625 H4TF1 TRANSFAC yes 36319380
chr1 234977620 234977625 H4TF1 TRANSFAC yes 118485280
chr1 234977620 234977636 RFX2 JASPAR yes 36319381
chr1 234977620 234977636 RFX3 JASPAR yes 36319382
chr1 234977620 234977636 RFX4 JASPAR yes 36319383
chr1 234977620 234977636 RFX2 JASPAR yes 118485281
chr1 234977620 234977636 RFX3 JASPAR yes 118485282
chr1 234977620 234977636 RFX4 JASPAR yes 118485283
chr1 234977644 234977648 ESR1 TRANSFAC yes 36319384
chr1 234977644 234977648 ESR1 TRANSFAC yes 118485284
chr1 234977651 234977655 ESR1 TRANSFAC yes 36319385
chr1 234977651 234977655 ESR1 TRANSFAC yes 118485285
chr1 234977651 234977666 FOXP1 JASPAR yes 36319386
chr1 234977651 234977666 FOXP1 JASPAR yes 118485286
chr1 234977655 234977669 SPI1 JASPAR yes 36319387
chr1 234977655 234977669 SPI1 JASPAR yes 118485287
chr1 234977686 234977700 SPI1 JASPAR yes 36319388
chr1 234977686 234977700 SPI1 JASPAR yes 118485288
chr1 234977692 234977703 NFKB1 JASPAR yes 36319389
chr1 234977692 234977703 NFKB1 JASPAR yes 118485289
chr1 234977693 234977703 NFKB1 JASPAR yes 36319390
chr1 234977693 234977703 REL JASPAR yes 36319391
chr1 234977693 234977703 NFKB1 JASPAR yes 118485290
chr1 234977693 234977703 REL JASPAR yes 118485291
chr1 234977698 234977704 MZF1 JASPAR yes 36319392
chr1 234977698 234977704 MZF1 JASPAR yes 118485292
chr1 234977706 234977722 NFYA JASPAR yes 36319393
chr1 234977706 234977722 NFYA JASPAR yes 118485293
chr1 234977711 234977715 H1TF2 TRANSFAC yes 36319394
chr1 234977711 234977715 NFE TRANSFAC yes 36319395
chr1 234977711 234977715 SRF TRANSFAC yes 36319396
chr1 234977711 234977715 H1TF2 TRANSFAC yes 118485294
chr1 234977711 234977715 NFE TRANSFAC yes 118485295
chr1 234977711 234977715 SRF TRANSFAC yes 118485296
chr1 234977729 234977744 FOXP1 JASPAR yes 36319397
chr1 234977729 234977744 FOXP1 JASPAR yes 118485297
chr1 234977732 234977743 FOXP2 JASPAR yes 36319398
chr1 234977732 234977743 FOXP2 JASPAR yes 118485298
chr1 234977733 234977741 FOXO3 JASPAR yes 36319399
chr1 234977733 234977741 FOXO3 JASPAR yes 118485299
chr1 234977734 234977743 SRY JASPAR yes 36319400
chr1 234977734 234977743 SRY JASPAR yes 118485300
chr1 234977743 234977750 NKX3-1 JASPAR yes 36319401
chr1 234977743 234977750 NKX3-1 JASPAR yes 118485301
chr1 234977747 234977758 RUNX1 JASPAR yes 36319402
chr1 234977747 234977758 RUNX1 JASPAR yes 118485302
chr1 234977760 234977770 MEF2A JASPAR yes 36319403
chr1 234977760 234977770 MEF2A JASPAR yes 118485303
chr1 234977761 234977765 TEAD2 TRANSFAC yes 36319404
chr1 234977761 234977765 TEAD2 TRANSFAC yes 118485304
chr1 234977761 234977766 TBP TRANSFAC yes 36319405
chr1 234977761 234977766 TBP TRANSFAC yes 118485305
chr1 234977782 234977786 YY1 TRANSFAC yes 36319406
chr1 234977782 234977786 YY1 TRANSFAC yes 118485306
chr1 234977800 234977815 FOXP1 JASPAR yes 36319407
chr1 234977800 234977815 FOXP1 JASPAR yes 118485307
chr1 234977801 234977816 FOXP1 JASPAR yes 36319408
chr1 234977801 234977816 FOXP1 JASPAR yes 118485308
chr1 234977819 234977832 ELF1 JASPAR yes 36319409
chr1 234977819 234977832 ELF1 JASPAR yes 118485309
chr1 234977820 234977832 EHF JASPAR yes 36319410
chr1 234977820 234977832 EHF JASPAR yes 118485310
chr1 234977820 234977833 ELF3 JASPAR yes 36319411
chr1 234977820 234977833 ELF3 JASPAR yes 118485311
chr1 234977821 234977832 ELF5 JASPAR yes 36319412
chr1 234977821 234977832 ELF5 JASPAR yes 118485312
chr1 234977823 234977828 ETS2 TRANSFAC yes 36319413
chr1 234977823 234977828 ETS2 TRANSFAC yes 118485313
chr1 234977823 234977831 FEV JASPAR yes 36319414
chr1 234977823 234977831 FEV JASPAR yes 118485314
chr1 234977824 234977831 SPI1 JASPAR yes 36319415
chr1 234977824 234977831 SPI1 JASPAR yes 118485315
chr1 234977847 234977860 ZBTB18 JASPAR yes 36319416
chr1 234977847 234977860 ZBTB18 JASPAR yes 118485316
chr1 234977849 234977859 FIGLA JASPAR yes 36319417
chr1 234977849 234977859 MSC JASPAR yes 36319418
chr1 234977849 234977859 MYF6 JASPAR yes 36319419
chr1 234977849 234977859 TFAP4 JASPAR yes 36319420
chr1 234977849 234977859 FIGLA JASPAR yes 118485317
chr1 234977849 234977859 MSC JASPAR yes 118485318
chr1 234977849 234977859 MYF6 JASPAR yes 118485319
chr1 234977849 234977859 TFAP4 JASPAR yes 118485320
chr1 234977849 234977861 TAL1 JASPAR yes 36319421
chr1 234977849 234977861 TAL1 JASPAR yes 118485321
chr1 234977850 234977863 SCRT2 JASPAR yes 36319422
chr1 234977850 234977863 SCRT2 JASPAR yes 118485322
chr1 234977869 234977882 ATF4 JASPAR yes 36319423
chr1 234977869 234977882 ATF4 JASPAR yes 118485323
chr1 234977870 234977883 JUN JASPAR yes 36319424
chr1 234977870 234977883 JUN JASPAR yes 118485324
chr1 234977892 234977904 POU3F1 JASPAR yes 36319425
chr1 234977892 234977904 POU3F2 JASPAR yes 36319426
chr1 234977892 234977904 POU3F1 JASPAR yes 118485325
chr1 234977892 234977904 POU3F2 JASPAR yes 118485326
chr1 234977892 234977905 POU3F3 JASPAR yes 36319427
chr1 234977892 234977905 POU3F3 JASPAR yes 118485327
chr1 234977893 234977905 POU2F1 JASPAR yes 36319428
chr1 234977893 234977905 POU2F1 JASPAR yes 118485328
chr1 234977894 234977903 POU3F4 JASPAR yes 36319429
chr1 234977894 234977903 POU5F1B JASPAR yes 36319430
chr1 234977894 234977903 POU3F4 JASPAR yes 118485329
chr1 234977894 234977903 POU5F1B JASPAR yes 118485330
chr1 234977895 234977907 HNF1B JASPAR yes 36319431
chr1 234977895 234977907 HNF1B JASPAR yes 118485331
chr1 234977897 234977907 BARHL2 JASPAR yes 36319432
chr1 234977897 234977907 BARHL2 JASPAR yes 118485332
chr1 234977899 234977903 YY1 TRANSFAC yes 36319433
chr1 234977899 234977903 YY1 TRANSFAC yes 118485333
chr1 234977903 234977906 MYB TRANSFAC yes 36319434
chr1 234977903 234977906 MYB TRANSFAC yes 118485334
chr1 234977919 234977923 H1TF2 TRANSFAC yes 36319435
chr1 234977919 234977923 NFE TRANSFAC yes 36319436
chr1 234977919 234977923 SRF TRANSFAC yes 36319437
chr1 234977919 234977923 H1TF2 TRANSFAC yes 118485335
chr1 234977919 234977923 NFE TRANSFAC yes 118485336
chr1 234977919 234977923 SRF TRANSFAC yes 118485337
chr1 234977919 234977925 NFYC TRANSFAC yes 36319438
chr1 234977919 234977925 NFYC TRANSFAC yes 118485338
chr1 234977950 234977960 PAX7 JASPAR yes 36319439
chr1 234977950 234977960 PAX7 JASPAR yes 118485339
chr1 234977952 234977973 IRF1 JASPAR yes 36319440
chr1 234977952 234977973 IRF1 JASPAR yes 118485340
chr1 234977954 234977965 FLI1 JASPAR yes 36319441
chr1 234977954 234977965 FLI1 JASPAR yes 118485341
chr1 234977955 234977959 YY1 TRANSFAC yes 36319442
chr1 234977955 234977959 YY1 TRANSFAC yes 118485342
chr1 234977955 234977965 ETV6 JASPAR yes 36319443
chr1 234977955 234977965 ETV6 JASPAR yes 118485343
chr1 234977955 234977966 ETV2 JASPAR yes 36319444
chr1 234977955 234977966 ETV2 JASPAR yes 118485344
chr1 234977955 234977968 ELF1 JASPAR yes 36319445
chr1 234977955 234977968 ELF1 JASPAR yes 118485345
chr1 234977955 234977969 SPIC JASPAR yes 36319446
chr1 234977955 234977969 SPIC JASPAR yes 118485346
chr1 234977956 234977964 FEV JASPAR yes 36319447
chr1 234977956 234977964 FEV JASPAR yes 118485347
chr1 234977958 234977965 SPIB JASPAR yes 36319448
chr1 234977958 234977965 SPIB JASPAR yes 118485348
chr1 234977973 234977980 NKX3-1 JASPAR yes 36319449
chr1 234977973 234977980 NKX3-1 JASPAR yes 118485349
chr1 234977977 234977981 YY1 TRANSFAC yes 36319450
chr1 234977977 234977981 YY1 TRANSFAC yes 118485350
chr1 234978009 234978019 TBX21 JASPAR yes 36319451
chr1 234978009 234978019 TBX21 JASPAR yes 118485351
chr1 234978009 234978020 TBX2 JASPAR yes 36319452
chr1 234978009 234978020 TBX2 JASPAR yes 118485352
chr1 234978009 234978022 EOMES JASPAR yes 36319453
chr1 234978009 234978022 POU3F3 JASPAR yes 36319454
chr1 234978009 234978022 EOMES JASPAR yes 118485353
chr1 234978009 234978022 POU3F3 JASPAR yes 118485354
SNP sites on vista5646[chr1:234977482-234978011]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234977501 rs116722629 A G
NR2C2 NR2F1 RXRG
1046655
chr1 234977514 rs114331275 G A
RUNX3
1046656
chr1 234977548 rs114477041 G A
RUNX3 SPI1
1046657
chr1 234977562 rs2802979 T C
PKNOX1 PKNOX2 RUNX3 SPI1 TEAD2 TGIF1
1046658
chr1 234977717 rs80159308 C T
NFYA RUNX3 SPI1
1046659
chr1 234977723 rs115850466 C G
RUNX3 SPI1
1046660
chr1 234977743 rs74148599 T C
FOXP1 FOXP2 NKX3-1 RUNX3 SPI1 SRY
1046661
chr1 234977801 rs113156654 CT C
FOXP1 RUNX3 SPI1
1046662
chr1 234977917 rs150908249 G T no 1046663
chr1 234977985 rs561665298 T C no 1046664
Genes possibly regulated by vista5646[chr1:234977482-234978011]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5646[chr1:234977482-234978011]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results