EnhancerDB
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  3. vista5647[chr1:234978594-234979177]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5647[chr1:234978594-234979177]
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Tissue distribution of vista5647
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Transcription factor that possibly regulate vista5647[chr1:234978594-234979177]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234978135 234979568 POLR2A UCSC Txn Factor no Conserved 107882477
chr1 234978623 234979032 EBF1 UCSC Txn Factor no Conserved 107882630
chr1 234978660 234979302 NFIC UCSC Txn Factor no Conserved 107882643
chr1 234978677 234979087 RUNX3 UCSC Txn Factor no Conserved 107882649
chr1 234978736 234978979 EGR1 UCSC Txn Factor no Conserved 107882668
chr1 234978828 234979084 BATF UCSC Txn Factor no Conserved 107882690
chr1 234978584 234978599 SCRT1 JASPAR yes 36319567
chr1 234978584 234978599 SCRT1 JASPAR yes 118485355
chr1 234978588 234978598 SREBF2 JASPAR yes 36319569
chr1 234978588 234978598 SREBF2 JASPAR yes 118485356
chr1 234978588 234978599 USF2 JASPAR yes 36319570
chr1 234978588 234978599 USF2 JASPAR yes 118485357
chr1 234978588 234978602 JUN JASPAR yes 36319571
chr1 234978588 234978602 JUN JASPAR yes 118485358
chr1 234978591 234978602 JUNB JASPAR yes 36319572
chr1 234978591 234978602 JUNB JASPAR yes 118485359
chr1 234978592 234978603 FOSL1 JASPAR yes 36319573
chr1 234978592 234978603 FOSL1 JASPAR yes 118485360
chr1 234978593 234978600 JUN TRANSFAC yes 36319574
chr1 234978593 234978600 JUN TRANSFAC yes 118485361
chr1 234978623 234978637 TCF7L2 JASPAR yes 36319575
chr1 234978623 234978637 TCF7L2 JASPAR yes 118485362
chr1 234978626 234978632 LEF1 TRANSFAC yes 36319576
chr1 234978626 234978632 TCF4 TRANSFAC yes 36319577
chr1 234978626 234978632 LEF1 TRANSFAC yes 118485363
chr1 234978626 234978632 TCF4 TRANSFAC yes 118485364
chr1 234978635 234978648 SMAD2 JASPAR yes 36319578
chr1 234978635 234978648 SMAD2 JASPAR yes 118485365
chr1 234978643 234978654 EBF1 JASPAR yes 36319579
chr1 234978643 234978654 EBF1 JASPAR yes 118485366
chr1 234978655 234978660 H4TF1 TRANSFAC yes 36319580
chr1 234978655 234978660 H4TF1 TRANSFAC yes 118485367
chr1 234978680 234978693 ZBTB18 JASPAR yes 36319581
chr1 234978680 234978693 ZBTB18 JASPAR yes 118485368
chr1 234978692 234978696 LFA1 TRANSFAC yes 36319582
chr1 234978692 234978696 LFA1 TRANSFAC yes 118485369
chr1 234978693 234978708 TFAP2A JASPAR yes 36319583
chr1 234978693 234978708 TFAP2A JASPAR yes 118485370
chr1 234978708 234978725 BCL6B JASPAR yes 36319584
chr1 234978708 234978725 BCL6B JASPAR yes 118485371
chr1 234978748 234978752 NFE TRANSFAC yes 36319585
chr1 234978748 234978752 NFE TRANSFAC yes 118485372
chr1 234978764 234978774 GABPA JASPAR yes 36319586
chr1 234978764 234978774 GABPA JASPAR yes 118485373
chr1 234978764 234978775 ELK4 JASPAR yes 36319587
chr1 234978764 234978775 FLI1 JASPAR yes 36319588
chr1 234978764 234978775 ELK4 JASPAR yes 118485374
chr1 234978764 234978775 FLI1 JASPAR yes 118485375
chr1 234978766 234978776 NFKB1 JASPAR yes 36319589
chr1 234978766 234978776 NFKB1 JASPAR yes 118485376
chr1 234978804 234978814 RELA JASPAR yes 36319590
chr1 234978804 234978814 REL JASPAR yes 36319591
chr1 234978804 234978814 RELA JASPAR yes 118485377
chr1 234978804 234978814 REL JASPAR yes 118485378
chr1 234978804 234978815 NFKB1 JASPAR yes 36319592
chr1 234978804 234978815 NFKB1 JASPAR yes 118485379
chr1 234978809 234978815 ETS1 JASPAR yes 36319593
chr1 234978809 234978815 ETS1 JASPAR yes 118485380
chr1 234978828 234978832 NFE TRANSFAC yes 36319594
chr1 234978828 234978832 NFE TRANSFAC yes 118485381
chr1 234978832 234978842 NKX2-3 JASPAR yes 36319595
chr1 234978832 234978842 NKX2-3 JASPAR yes 118485382
chr1 234978842 234978856 GATA2 JASPAR yes 36319596
chr1 234978842 234978856 GATA2 JASPAR yes 118485383
chr1 234978846 234978854 GATA3 JASPAR yes 36319597
chr1 234978846 234978854 GATA3 JASPAR yes 118485384
chr1 234978846 234978861 JUND JASPAR yes 36319598
chr1 234978846 234978861 JUND JASPAR yes 118485385
chr1 234978853 234978874 ZNF263 JASPAR yes 36319599
chr1 234978853 234978874 ZNF263 JASPAR yes 118485386
chr1 234978857 234978877 RREB1 JASPAR yes 36319600
chr1 234978857 234978877 RREB1 JASPAR yes 118485387
chr1 234978866 234978880 EBF1 JASPAR yes 36319601
chr1 234978866 234978880 EBF1 JASPAR yes 118485388
chr1 234978890 234978901 STAT3 JASPAR yes 36319602
chr1 234978890 234978901 STAT3 JASPAR yes 118485389
chr1 234978919 234978923 TEAD2 TRANSFAC yes 36319603
chr1 234978919 234978923 TEAD2 TRANSFAC yes 118485390
chr1 234978930 234978935 MYC TRANSFAC yes 36319604
chr1 234978930 234978935 MYC TRANSFAC yes 118485391
chr1 234978944 234978955 BATF JASPAR yes 36319605
chr1 234978944 234978955 BATF JASPAR yes 118485392
chr1 234978949 234978962 ZBED1 JASPAR yes 36319606
chr1 234978949 234978962 ZBED1 JASPAR yes 118485393
chr1 234978954 234978962 UEF1 TRANSFAC yes 36319607
chr1 234978954 234978962 UEF1 TRANSFAC yes 118485394
chr1 234978955 234978963 MEIS2 JASPAR yes 36319608
chr1 234978955 234978963 MEIS3 JASPAR yes 36319609
chr1 234978955 234978963 MEIS2 JASPAR yes 118485395
chr1 234978955 234978963 MEIS3 JASPAR yes 118485396
chr1 234978989 234979001 YY1 JASPAR yes 36319610
chr1 234978989 234979001 YY1 JASPAR yes 118485397
chr1 234979015 234979031 ZNF143 JASPAR yes 36319611
chr1 234979015 234979031 ZNF143 JASPAR yes 118485398
chr1 234979020 234979024 YY1 TRANSFAC yes 36319612
chr1 234979020 234979024 YY1 TRANSFAC yes 118485399
chr1 234979024 234979029 ETS2 TRANSFAC yes 36319613
chr1 234979024 234979029 ETS2 TRANSFAC yes 118485400
chr1 234979058 234979069 TBX20 JASPAR yes 36319614
chr1 234979058 234979069 TBX20 JASPAR yes 118485401
chr1 234979086 234979095 NF-kappaB TRANSFAC yes 36319615
chr1 234979086 234979095 NF-kappaB TRANSFAC yes 118485402
chr1 234979086 234979096 NFKB1 JASPAR yes 36319616
chr1 234979086 234979096 RELA JASPAR yes 36319617
chr1 234979086 234979096 REL JASPAR yes 36319618
chr1 234979086 234979096 NFKB1 JASPAR yes 118485403
chr1 234979086 234979096 RELA JASPAR yes 118485404
chr1 234979086 234979096 REL JASPAR yes 118485405
chr1 234979086 234979097 NFKB1 JASPAR yes 36319619
chr1 234979086 234979097 NFKB1 JASPAR yes 118485406
chr1 234979088 234979102 STAT1 JASPAR yes 36319620
chr1 234979088 234979102 STAT1 JASPAR yes 118485407
chr1 234979115 234979125 NFATC3 JASPAR yes 36319621
chr1 234979115 234979125 NFATC3 JASPAR yes 118485408
chr1 234979122 234979135 SCRT2 JASPAR yes 36319622
chr1 234979122 234979135 SCRT2 JASPAR yes 118485409
chr1 234979144 234979156 POU2F1 JASPAR yes 36319623
chr1 234979144 234979156 POU2F1 JASPAR yes 118485410
chr1 234979144 234979157 POU3F3 JASPAR yes 36319624
chr1 234979144 234979157 POU3F3 JASPAR yes 118485411
chr1 234979144 234979158 POU1F1 JASPAR yes 36319625
chr1 234979144 234979158 POU1F1 JASPAR yes 118485412
chr1 234979145 234979157 POU3F1 JASPAR yes 36319626
chr1 234979145 234979157 POU3F1 JASPAR yes 118485413
chr1 234979145 234979158 POU2F2 JASPAR yes 36319627
chr1 234979145 234979158 POU2F2 JASPAR yes 118485414
chr1 234979146 234979155 POU3F4 JASPAR yes 36319628
chr1 234979146 234979155 POU5F1B JASPAR yes 36319629
chr1 234979146 234979155 POU3F4 JASPAR yes 118485415
chr1 234979146 234979155 POU5F1B JASPAR yes 118485416
chr1 234979156 234979166 MYF6 JASPAR yes 36319630
chr1 234979156 234979166 MYF6 JASPAR yes 118485417
chr1 234979158 234979173 MAFK JASPAR yes 36319631
chr1 234979158 234979173 MAFK JASPAR yes 118485418
chr1 234979173 234979183 NKX2-3 JASPAR yes 36319632
chr1 234979173 234979183 NKX2-3 JASPAR yes 118485419
chr1 234979174 234979183 NKX2-8 JASPAR yes 36319633
chr1 234979174 234979183 NKX2-8 JASPAR yes 118485420
SNP sites on vista5647[chr1:234978594-234979177]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234978640 rs185992384 C T
EBF1 POLR2A SMAD2
1046672
chr1 234978669 rs2796163 T A,G
EBF1 NFIC POLR2A
1046673
chr1 234979010 rs565191348 G A
BATF EBF1 NFIC POLR2A RUNX3
1046674
chr1 234979020 rs532543898 G A
BATF EBF1 NFIC POLR2A RUNX3 YY1 ZNF143
1046675
Genes possibly regulated by vista5647[chr1:234978594-234979177]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5647[chr1:234978594-234979177]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results