EnhancerDB
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  3. vista5650[chr1:234984948-234985284]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5650[chr1:234984948-234985284]
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Tissue distribution of vista5650
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Transcription factor that possibly regulate vista5650[chr1:234984948-234985284]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 234984538 234985042 CTCF UCSC Txn Factor no Conserved 107883136
chr1 234984937 234984949 TAL1 JASPAR yes 36320560
chr1 234984937 234984949 TAL1 JASPAR yes 118485573
chr1 234984968 234984983 AR JASPAR yes 36320561
chr1 234984968 234984983 AR JASPAR yes 118485574
chr1 234984973 234984977 YY1 TRANSFAC yes 36320562
chr1 234984973 234984977 YY1 TRANSFAC yes 118485575
chr1 234984976 234984983 NKX3-1 JASPAR yes 36320563
chr1 234984976 234984983 NKX3-1 JASPAR yes 118485576
chr1 234984983 234985003 TP53 JASPAR yes 36320564
chr1 234984983 234985003 TP53 JASPAR yes 118485577
chr1 234984987 234985002 TP53 JASPAR yes 36320565
chr1 234984987 234985002 TP53 JASPAR yes 118485578
chr1 234984997 234985010 POU2F2 JASPAR yes 36320566
chr1 234984997 234985010 POU2F2 JASPAR yes 118485579
chr1 234985004 234985016 YY1 JASPAR yes 36320567
chr1 234985004 234985016 YY1 JASPAR yes 118485580
chr1 234985004 234985019 SOX21 JASPAR yes 36320568
chr1 234985004 234985019 SOX21 JASPAR yes 118485581
chr1 234985009 234985029 ESR1 JASPAR yes 36320569
chr1 234985009 234985029 ESR1 JASPAR yes 118485582
chr1 234985012 234985030 ESR2 JASPAR yes 36320570
chr1 234985012 234985030 ESR2 JASPAR yes 118485583
chr1 234985013 234985030 ESR1 JASPAR yes 36320571
chr1 234985013 234985030 ESR1 JASPAR yes 118485584
chr1 234985014 234985027 JUN JASPAR yes 36320572
chr1 234985014 234985027 JUN JASPAR yes 118485585
chr1 234985014 234985029 ESR2 JASPAR yes 36320573
chr1 234985014 234985029 ESR2 JASPAR yes 118485586
chr1 234985038 234985059 ZNF263 JASPAR yes 36320574
chr1 234985038 234985059 ZNF263 JASPAR yes 118485587
chr1 234985046 234985059 ELF1 JASPAR yes 36320575
chr1 234985046 234985059 ELF1 JASPAR yes 118485588
chr1 234985064 234985069 ETS2 TRANSFAC yes 36320576
chr1 234985064 234985069 ETS2 TRANSFAC yes 118485589
chr1 234985071 234985085 IRF7 JASPAR yes 36320577
chr1 234985071 234985085 IRF7 JASPAR yes 118485590
chr1 234985096 234985117 IRF1 JASPAR yes 36320578
chr1 234985096 234985117 IRF1 JASPAR yes 118485591
chr1 234985098 234985109 FLI1 JASPAR yes 36320579
chr1 234985098 234985109 FLI1 JASPAR yes 118485592
chr1 234985099 234985113 SPI1 JASPAR yes 36320580
chr1 234985099 234985113 SPIC JASPAR yes 36320581
chr1 234985099 234985113 SPI1 JASPAR yes 118485593
chr1 234985099 234985113 SPIC JASPAR yes 118485594
chr1 234985100 234985108 EHF JASPAR yes 36320582
chr1 234985100 234985108 EHF JASPAR yes 118485595
chr1 234985102 234985109 SPIB JASPAR yes 36320583
chr1 234985102 234985109 SPIB JASPAR yes 118485596
chr1 234985124 234985138 FOXF2 JASPAR yes 36320584
chr1 234985124 234985138 FOXF2 JASPAR yes 118485597
chr1 234985124 234985139 FOXP1 JASPAR yes 36320585
chr1 234985124 234985139 FOXP1 JASPAR yes 118485598
chr1 234985125 234985136 FOXA1 JASPAR yes 36320586
chr1 234985125 234985136 FOXA1 JASPAR yes 118485599
chr1 234985125 234985140 FOXA1 JASPAR yes 36320587
chr1 234985125 234985140 FOXA1 JASPAR yes 118485600
chr1 234985126 234985132 JUN TRANSFAC yes 36320588
chr1 234985126 234985132 JUN TRANSFAC yes 118485601
chr1 234985126 234985137 FOXB1 JASPAR yes 36320589
chr1 234985126 234985137 FOXC1 JASPAR yes 36320590
chr1 234985126 234985137 FOXB1 JASPAR yes 118485602
chr1 234985126 234985137 FOXC1 JASPAR yes 118485603
chr1 234985126 234985138 FOXC2 JASPAR yes 36320591
chr1 234985126 234985138 FOXC2 JASPAR yes 118485604
chr1 234985127 234985138 FOXP2 JASPAR yes 36320592
chr1 234985127 234985138 FOXP2 JASPAR yes 118485605
chr1 234985129 234985136 FOXD2 JASPAR yes 36320593
chr1 234985129 234985136 FOXI1 JASPAR yes 36320594
chr1 234985129 234985136 FOXL1 JASPAR yes 36320595
chr1 234985129 234985136 FOXO4 JASPAR yes 36320596
chr1 234985129 234985136 FOXO6 JASPAR yes 36320597
chr1 234985129 234985136 FOXP3 JASPAR yes 36320598
chr1 234985129 234985136 FOXD2 JASPAR yes 118485606
chr1 234985129 234985136 FOXI1 JASPAR yes 118485607
chr1 234985129 234985136 FOXL1 JASPAR yes 118485608
chr1 234985129 234985136 FOXO4 JASPAR yes 118485609
chr1 234985129 234985136 FOXO6 JASPAR yes 118485610
chr1 234985129 234985136 FOXP3 JASPAR yes 118485611
chr1 234985129 234985137 FOXD1 JASPAR yes 36320599
chr1 234985129 234985137 FOXG1 JASPAR yes 36320600
chr1 234985129 234985137 FOXO3 JASPAR yes 36320601
chr1 234985129 234985137 FOXD1 JASPAR yes 118485612
chr1 234985129 234985137 FOXG1 JASPAR yes 118485613
chr1 234985129 234985137 FOXO3 JASPAR yes 118485614
chr1 234985129 234985138 SRY JASPAR yes 36320602
chr1 234985129 234985138 SRY JASPAR yes 118485615
chr1 234985131 234985140 SOX9 JASPAR yes 36320603
chr1 234985131 234985140 SOX9 JASPAR yes 118485616
chr1 234985132 234985147 SOX21 JASPAR yes 36320604
chr1 234985132 234985147 SOX21 JASPAR yes 118485617
chr1 234985132 234985148 SOX4 JASPAR yes 36320605
chr1 234985132 234985148 SOX4 JASPAR yes 118485618
chr1 234985153 234985157 YY1 TRANSFAC yes 36320606
chr1 234985153 234985157 YY1 TRANSFAC yes 118485619
chr1 234985175 234985182 PEA3 TRANSFAC yes 36320607
chr1 234985175 234985182 PEA3 TRANSFAC yes 118485620
chr1 234985191 234985206 FOXP1 JASPAR yes 36320608
chr1 234985191 234985206 FOXP1 JASPAR yes 118485621
chr1 234985193 234985208 FOXP1 JASPAR yes 36320609
chr1 234985193 234985208 FOXP1 JASPAR yes 118485622
chr1 234985194 234985215 IRF1 JASPAR yes 36320610
chr1 234985194 234985215 IRF1 JASPAR yes 118485623
chr1 234985195 234985210 FOXP1 JASPAR yes 36320611
chr1 234985195 234985210 FOXP1 JASPAR yes 118485624
chr1 234985196 234985217 IRF1 JASPAR yes 36320612
chr1 234985196 234985217 IRF1 JASPAR yes 118485625
chr1 234985197 234985203 TBP TRANSFAC yes 36320613
chr1 234985197 234985203 TBP TRANSFAC yes 118485626
chr1 234985197 234985212 FOXP1 JASPAR yes 36320614
chr1 234985197 234985212 FOXP1 JASPAR yes 118485627
chr1 234985198 234985219 IRF1 JASPAR yes 36320615
chr1 234985198 234985219 IRF1 JASPAR yes 118485628
chr1 234985202 234985217 PRDM1 JASPAR yes 36320616
chr1 234985202 234985217 PRDM1 JASPAR yes 118485629
chr1 234985226 234985244 SRF JASPAR yes 36320617
chr1 234985226 234985244 SRF JASPAR yes 118485630
chr1 234985237 234985242 ETS2 TRANSFAC yes 36320618
chr1 234985237 234985242 ETS2 TRANSFAC yes 118485631
chr1 234985237 234985245 EHF JASPAR yes 36320619
chr1 234985237 234985245 EHF JASPAR yes 118485632
chr1 234985256 234985276 RREB1 JASPAR yes 36320620
chr1 234985256 234985276 RREB1 JASPAR yes 118485633
chr1 234985258 234985278 RREB1 JASPAR yes 36320621
chr1 234985258 234985278 RREB1 JASPAR yes 118485634
chr1 234985270 234985284 TLX1 JASPAR yes 36320622
chr1 234985270 234985284 TLX1 JASPAR yes 118485635
chr1 234985280 234985290 NEUROG2 JASPAR yes 36320623
chr1 234985280 234985290 NEUROG2 JASPAR yes 118485636
SNP sites on vista5650[chr1:234984948-234985284]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 234984966 rs370727800 A G
CTCF
1046744
chr1 234984988 rs2069084 G A
CTCF TP53
1046745
chr1 234985163 rs72752281 C T no 1046746
chr1 234985168 rs79730903 C T no 1046747
Genes possibly regulated by vista5650[chr1:234984948-234985284]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5650[chr1:234984948-234985284]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results