EnhancerDB
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  3. vista5664[chr1:235080718-235080947]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5664[chr1:235080718-235080947]
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Tissue distribution of vista5664
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Transcription factor that possibly regulate vista5664[chr1:235080718-235080947]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 235080706 235081039 NFATC1 UCSC Txn Factor no Conserved 107884464
chr1 235080726 235080741 HNF4G JASPAR yes 36333449
chr1 235080726 235080741 LEF1 JASPAR yes 36333450
chr1 235080726 235080741 HNF4G JASPAR yes 118486120
chr1 235080726 235080741 LEF1 JASPAR yes 118486121
chr1 235080727 235080741 TCF7L2 JASPAR yes 36333451
chr1 235080727 235080741 TCF7L2 JASPAR yes 118486122
chr1 235080739 235080745 TCF1 TRANSFAC yes 36333452
chr1 235080739 235080745 TCF1 TRANSFAC yes 118486123
chr1 235080739 235080746 TCF4 TRANSFAC yes 36333453
chr1 235080739 235080746 TCF4 TRANSFAC yes 118486124
chr1 235080767 235080781 TCF7L2 JASPAR yes 36333454
chr1 235080767 235080781 TCF7L2 JASPAR yes 118486125
chr1 235080767 235080782 LEF1 JASPAR yes 36333455
chr1 235080767 235080782 LEF1 JASPAR yes 118486126
chr1 235080769 235080786 RXRA JASPAR yes 36333456
chr1 235080769 235080786 RXRA JASPAR yes 118486127
chr1 235080771 235080777 TCF4 TRANSFAC yes 36333457
chr1 235080771 235080777 TCF4 TRANSFAC yes 118486128
chr1 235080781 235080785 LFA1 TRANSFAC yes 36333458
chr1 235080781 235080785 LFA1 TRANSFAC yes 118486129
chr1 235080782 235080791 NKX3-2 JASPAR yes 36333459
chr1 235080782 235080791 NKX3-2 JASPAR yes 118486130
chr1 235080783 235080791 ISL2 JASPAR yes 36333460
chr1 235080783 235080791 ISL2 JASPAR yes 118486131
chr1 235080792 235080813 IRF1 JASPAR yes 36333461
chr1 235080792 235080813 IRF1 JASPAR yes 118486132
chr1 235080795 235080816 IRF1 JASPAR yes 36333462
chr1 235080795 235080816 IRF1 JASPAR yes 118486133
chr1 235080799 235080813 SPI1 JASPAR yes 36333463
chr1 235080799 235080813 SPI1 JASPAR yes 118486134
chr1 235080851 235080865 SPI1 JASPAR yes 36333464
chr1 235080851 235080865 SPIC JASPAR yes 36333465
chr1 235080851 235080865 SPI1 JASPAR yes 118486135
chr1 235080851 235080865 SPIC JASPAR yes 118486136
chr1 235080851 235080866 STAT2 JASPAR yes 36333466
chr1 235080851 235080866 STAT2 JASPAR yes 118486137
chr1 235080857 235080864 SPI1 JASPAR yes 36333467
chr1 235080857 235080864 SPI1 JASPAR yes 118486138
chr1 235080866 235080872 ZNF354C JASPAR yes 36333468
chr1 235080866 235080872 ZNF354C JASPAR yes 118486139
chr1 235080869 235080879 NFATC3 JASPAR yes 36333469
chr1 235080869 235080879 NFATC3 JASPAR yes 118486140
chr1 235080880 235080887 JUN TRANSFAC yes 36333470
chr1 235080880 235080887 JUN TRANSFAC yes 118486141
chr1 235080889 235080904 MEF2C JASPAR yes 36333471
chr1 235080889 235080904 MEF2C JASPAR yes 118486142
chr1 235080890 235080905 MEF2A JASPAR yes 36333472
chr1 235080890 235080905 MEF2A JASPAR yes 118486143
chr1 235080891 235080903 MEF2A JASPAR yes 36333473
chr1 235080891 235080903 MEF2A JASPAR yes 118486144
chr1 235080892 235080902 MEF2A JASPAR yes 36333474
chr1 235080892 235080902 MEF2A JASPAR yes 118486145
chr1 235080936 235080946 MYF6 JASPAR yes 36333475
chr1 235080936 235080946 MYF6 JASPAR yes 118486146
SNP sites on vista5664[chr1:235080718-235080947]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 235080922 rs114088312 C T
NFATC1
1048031
Genes possibly regulated by vista5664[chr1:235080718-235080947]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5664[chr1:235080718-235080947]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results