EnhancerDB
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  3. vista5669[chr1:235094853-235095190]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5669[chr1:235094853-235095190]
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Tissue distribution of vista5669
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Transcription factor that possibly regulate vista5669[chr1:235094853-235095190]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 235094696 235095166 GATA3 UCSC Txn Factor no Conserved 107884656
chr1 235094846 235094861 STAT1 JASPAR yes 36334745
chr1 235094846 235094861 STAT1 JASPAR yes 118486327
chr1 235094848 235094859 STAT3 JASPAR yes 36334746
chr1 235094848 235094859 STAT3 JASPAR yes 118486328
chr1 235094854 235094869 STAT2 JASPAR yes 36334747
chr1 235094854 235094869 STAT2 JASPAR yes 118486329
chr1 235094857 235094864 SPIB JASPAR yes 36334748
chr1 235094857 235094864 SPIB JASPAR yes 118486330
chr1 235094878 235094883 ETS2 TRANSFAC yes 36334749
chr1 235094878 235094883 ETS2 TRANSFAC yes 118486331
chr1 235094881 235094887 SOX10 JASPAR yes 36334750
chr1 235094881 235094887 SOX10 JASPAR yes 118486332
chr1 235094883 235094897 TLX1 JASPAR yes 36334751
chr1 235094883 235094897 TLX1 JASPAR yes 118486333
chr1 235094928 235094943 ZIC3 JASPAR yes 36334752
chr1 235094928 235094943 ZIC3 JASPAR yes 118486334
chr1 235094964 235094970 ETS1 JASPAR yes 36334753
chr1 235094964 235094970 SPI1 JASPAR yes 36334754
chr1 235094964 235094970 ETS1 JASPAR yes 118486335
chr1 235094964 235094970 SPI1 JASPAR yes 118486336
chr1 235094970 235094984 GATA2 JASPAR yes 36334755
chr1 235094970 235094984 GATA2 JASPAR yes 118486337
chr1 235094973 235094984 HOXA10 JASPAR yes 36334756
chr1 235094973 235094984 HOXA10 JASPAR yes 118486338
chr1 235094978 235094993 SOX21 JASPAR yes 36334757
chr1 235094978 235094993 SOX21 JASPAR yes 118486339
chr1 235094978 235094994 SOX4 JASPAR yes 36334758
chr1 235094978 235094994 SOX4 JASPAR yes 118486340
chr1 235095010 235095020 GBX2 JASPAR yes 36334759
chr1 235095010 235095020 GSX2 JASPAR yes 36334760
chr1 235095010 235095020 MNX1 JASPAR yes 36334761
chr1 235095010 235095020 RAX JASPAR yes 36334762
chr1 235095010 235095020 GBX2 JASPAR yes 118486341
chr1 235095010 235095020 GSX2 JASPAR yes 118486342
chr1 235095010 235095020 MNX1 JASPAR yes 118486343
chr1 235095010 235095020 RAX JASPAR yes 118486344
chr1 235095010 235095021 HOXA10 JASPAR yes 36334763
chr1 235095010 235095021 HOXA10 JASPAR yes 118486345
chr1 235095011 235095019 BARX1 JASPAR yes 36334764
chr1 235095011 235095019 BSX JASPAR yes 36334765
chr1 235095011 235095019 ISL2 JASPAR yes 36334766
chr1 235095011 235095019 LMX1B JASPAR yes 36334767
chr1 235095011 235095019 MSX1 JASPAR yes 36334768
chr1 235095011 235095019 MSX2 JASPAR yes 36334769
chr1 235095011 235095019 BARX1 JASPAR yes 118486346
chr1 235095011 235095019 BSX JASPAR yes 118486347
chr1 235095011 235095019 ISL2 JASPAR yes 118486348
chr1 235095011 235095019 LMX1B JASPAR yes 118486349
chr1 235095011 235095019 MSX1 JASPAR yes 118486350
chr1 235095011 235095019 MSX2 JASPAR yes 118486351
chr1 235095011 235095021 HOXD13 JASPAR yes 36334770
chr1 235095011 235095021 HOXD13 JASPAR yes 118486352
chr1 235095047 235095059 PBX1 JASPAR yes 36334771
chr1 235095047 235095059 PBX1 JASPAR yes 118486353
chr1 235095069 235095083 EBF1 JASPAR yes 36334772
chr1 235095069 235095083 EBF1 JASPAR yes 118486354
chr1 235095070 235095081 EBF1 JASPAR yes 36334773
chr1 235095070 235095081 EBF1 JASPAR yes 118486355
chr1 235095071 235095082 EBF1 JASPAR yes 36334774
chr1 235095071 235095082 EBF1 JASPAR yes 118486356
chr1 235095081 235095095 BATF3 JASPAR yes 36334775
chr1 235095081 235095095 BATF3 JASPAR yes 118486357
chr1 235095098 235095113 TFAP2A JASPAR yes 36334776
chr1 235095098 235095113 TFAP2A JASPAR yes 118486358
chr1 235095100 235095113 TFAP2A JASPAR yes 36334777
chr1 235095100 235095113 TFAP2B JASPAR yes 36334778
chr1 235095100 235095113 TFAP2C JASPAR yes 36334779
chr1 235095100 235095113 TFAP2A JASPAR yes 118486359
chr1 235095100 235095113 TFAP2B JASPAR yes 118486360
chr1 235095100 235095113 TFAP2C JASPAR yes 118486361
chr1 235095101 235095113 TFAP2A JASPAR yes 36334780
chr1 235095101 235095113 TFAP2B JASPAR yes 36334781
chr1 235095101 235095113 TFAP2C JASPAR yes 36334782
chr1 235095101 235095113 TFAP2A JASPAR yes 118486362
chr1 235095101 235095113 TFAP2B JASPAR yes 118486363
chr1 235095101 235095113 TFAP2C JASPAR yes 118486364
chr1 235095103 235095123 RREB1 JASPAR yes 36334783
chr1 235095103 235095123 RREB1 JASPAR yes 118486365
chr1 235095128 235095149 ZNF263 JASPAR yes 36334784
chr1 235095128 235095149 ZNF263 JASPAR yes 118486366
chr1 235095138 235095155 PAX1 JASPAR yes 36334785
chr1 235095138 235095155 PAX9 JASPAR yes 36334786
chr1 235095138 235095155 PAX1 JASPAR yes 118486367
chr1 235095138 235095155 PAX9 JASPAR yes 118486368
chr1 235095181 235095186 SP1 TRANSFAC yes 36334787
chr1 235095181 235095186 SP1 TRANSFAC yes 118486369
chr1 235095185 235095189 ESR1 TRANSFAC yes 36334788
chr1 235095185 235095189 ESR1 TRANSFAC yes 118486370
SNP sites on vista5669[chr1:235094853-235095190]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 235094905 rs150764095 T A
GATA3
1048216
chr1 235094931 rs2802928 A G
GATA3 ZIC3
1048217
chr1 235094997 rs74662812 A C
GATA3
1048218
chr1 235095008 rs75128353 T C
GATA3
1048219
chr1 235095183 rs7531062 G A
SP1
1048220
Genes possibly regulated by vista5669[chr1:235094853-235095190]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5669[chr1:235094853-235095190]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results