EnhancerDB
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  3. vista5672[chr1:235104770-235105153]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5672[chr1:235104770-235105153]
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Tissue distribution of vista5672
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Transcription factor that possibly regulate vista5672[chr1:235104770-235105153]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 235104805 235104817 MEF2A JASPAR yes 36336108
chr1 235104805 235104817 MEF2A JASPAR yes 118486452
chr1 235104807 235104818 CDX2 JASPAR yes 36336109
chr1 235104807 235104818 CDX2 JASPAR yes 118486453
chr1 235104807 235104821 FOXF2 JASPAR yes 36336110
chr1 235104807 235104821 FOXF2 JASPAR yes 118486454
chr1 235104807 235104822 FOXP1 JASPAR yes 36336111
chr1 235104807 235104822 FOXP1 JASPAR yes 118486455
chr1 235104808 235104819 HOXA10 JASPAR yes 36336112
chr1 235104808 235104819 HOXA10 JASPAR yes 118486456
chr1 235104809 235104818 CDX1 JASPAR yes 36336113
chr1 235104809 235104818 CDX1 JASPAR yes 118486457
chr1 235104809 235104819 HOXA13 JASPAR yes 36336114
chr1 235104809 235104819 HOXA13 JASPAR yes 118486458
chr1 235104810 235104821 FOXP2 JASPAR yes 36336115
chr1 235104810 235104821 FOXP2 JASPAR yes 118486459
chr1 235104812 235104820 FOXG1 JASPAR yes 36336116
chr1 235104812 235104820 FOXO3 JASPAR yes 36336117
chr1 235104812 235104820 FOXG1 JASPAR yes 118486460
chr1 235104812 235104820 FOXO3 JASPAR yes 118486461
chr1 235104812 235104821 SRY JASPAR yes 36336118
chr1 235104812 235104821 SRY JASPAR yes 118486462
chr1 235104814 235104823 SOX9 JASPAR yes 36336119
chr1 235104814 235104823 SOX9 JASPAR yes 118486463
chr1 235104833 235104837 H1TF2 TRANSFAC yes 36336120
chr1 235104833 235104837 NFE TRANSFAC yes 36336121
chr1 235104833 235104837 SRF TRANSFAC yes 36336122
chr1 235104833 235104837 H1TF2 TRANSFAC yes 118486464
chr1 235104833 235104837 NFE TRANSFAC yes 118486465
chr1 235104833 235104837 SRF TRANSFAC yes 118486466
chr1 235104855 235104869 GATA2 JASPAR yes 36336123
chr1 235104855 235104869 GATA2 JASPAR yes 118486467
chr1 235104857 235104864 GATA3 TRANSFAC yes 36336124
chr1 235104857 235104864 GATA3 TRANSFAC yes 118486468
chr1 235104857 235104865 GATA5 JASPAR yes 36336125
chr1 235104857 235104865 GATA5 JASPAR yes 118486469
chr1 235104859 235104874 MEF2C JASPAR yes 36336126
chr1 235104859 235104874 MEF2C JASPAR yes 118486470
chr1 235104860 235104863 MYB TRANSFAC yes 36336127
chr1 235104860 235104863 MYB TRANSFAC yes 118486471
chr1 235104860 235104875 MEF2A JASPAR yes 36336128
chr1 235104860 235104875 MEF2A JASPAR yes 118486472
chr1 235104861 235104873 MEF2A JASPAR yes 36336129
chr1 235104861 235104873 MEF2B JASPAR yes 36336130
chr1 235104861 235104873 MEF2D JASPAR yes 36336131
chr1 235104861 235104873 MEF2A JASPAR yes 118486473
chr1 235104861 235104873 MEF2B JASPAR yes 118486474
chr1 235104861 235104873 MEF2D JASPAR yes 118486475
chr1 235104867 235104879 IRF1 JASPAR yes 36336132
chr1 235104867 235104879 IRF1 JASPAR yes 118486476
chr1 235104878 235104882 YY1 TRANSFAC yes 36336133
chr1 235104878 235104882 YY1 TRANSFAC yes 118486477
chr1 235104901 235104905 LFA1 TRANSFAC yes 36336134
chr1 235104901 235104905 LFA1 TRANSFAC yes 118486478
chr1 235104912 235104922 NKX2-3 JASPAR yes 36336135
chr1 235104912 235104922 NKX2-3 JASPAR yes 118486479
chr1 235104913 235104922 NKX2-8 JASPAR yes 36336136
chr1 235104913 235104922 NKX2-8 JASPAR yes 118486480
chr1 235104917 235104927 RELA JASPAR yes 36336137
chr1 235104917 235104927 RELA JASPAR yes 118486481
chr1 235104920 235104930 NFATC3 JASPAR yes 36336138
chr1 235104920 235104930 NFATC3 JASPAR yes 118486482
chr1 235104993 235104996 MYB TRANSFAC yes 36336139
chr1 235104993 235104996 MYB TRANSFAC yes 118486483
chr1 235104993 235105004 PHOX2A JASPAR yes 36336140
chr1 235104993 235105004 PROP1 JASPAR yes 36336141
chr1 235104993 235105004 PHOX2A JASPAR yes 118486484
chr1 235104993 235105004 PROP1 JASPAR yes 118486485
chr1 235104999 235105003 YY1 TRANSFAC yes 36336142
chr1 235104999 235105003 YY1 TRANSFAC yes 118486486
chr1 235105003 235105009 GATA3 JASPAR yes 36336143
chr1 235105003 235105009 GATA3 JASPAR yes 118486487
chr1 235105019 235105030 ELK4 JASPAR yes 36336144
chr1 235105019 235105030 FLI1 JASPAR yes 36336145
chr1 235105019 235105030 ELK4 JASPAR yes 118486488
chr1 235105019 235105030 FLI1 JASPAR yes 118486489
chr1 235105020 235105030 ETV6 JASPAR yes 36336146
chr1 235105020 235105030 GABPA JASPAR yes 36336147
chr1 235105020 235105030 ETV6 JASPAR yes 118486490
chr1 235105020 235105030 GABPA JASPAR yes 118486491
chr1 235105020 235105031 ELF5 JASPAR yes 36336148
chr1 235105020 235105031 ELF5 JASPAR yes 118486492
chr1 235105020 235105033 ELF1 JASPAR yes 36336149
chr1 235105020 235105033 ELF1 JASPAR yes 118486493
chr1 235105020 235105034 SPI1 JASPAR yes 36336150
chr1 235105020 235105034 SPI1 JASPAR yes 118486494
chr1 235105021 235105028 SPI1 JASPAR yes 36336151
chr1 235105021 235105028 SPI1 JASPAR yes 118486495
chr1 235105021 235105029 EHF JASPAR yes 36336152
chr1 235105021 235105029 EHF JASPAR yes 118486496
chr1 235105023 235105030 SPIB JASPAR yes 36336153
chr1 235105023 235105030 SPIB JASPAR yes 118486497
chr1 235105027 235105039 MEF2A JASPAR yes 36336154
chr1 235105027 235105039 MEF2A JASPAR yes 118486498
chr1 235105038 235105049 STAT1 JASPAR yes 36336155
chr1 235105038 235105049 STAT3 JASPAR yes 36336156
chr1 235105038 235105049 STAT1 JASPAR yes 118486499
chr1 235105038 235105049 STAT3 JASPAR yes 118486500
chr1 235105048 235105069 IRF1 JASPAR yes 36336157
chr1 235105048 235105069 IRF1 JASPAR yes 118486501
chr1 235105052 235105066 STAT1 JASPAR yes 36336158
chr1 235105052 235105066 STAT1 JASPAR yes 118486502
chr1 235105052 235105067 STAT2 JASPAR yes 36336159
chr1 235105052 235105067 STAT2 JASPAR yes 118486503
chr1 235105060 235105066 HiNF-A TRANSFAC yes 36336160
chr1 235105060 235105066 HiNF-A TRANSFAC yes 118486504
chr1 235105085 235105095 MAX JASPAR yes 36336161
chr1 235105085 235105095 MAX JASPAR yes 118486505
chr1 235105085 235105096 USF1 JASPAR yes 36336162
chr1 235105085 235105096 USF2 JASPAR yes 36336163
chr1 235105085 235105096 USF1 JASPAR yes 118486506
chr1 235105085 235105096 USF2 JASPAR yes 118486507
chr1 235105086 235105096 CLOCK JASPAR yes 36336164
chr1 235105086 235105096 MAX JASPAR yes 36336165
chr1 235105086 235105096 MLX JASPAR yes 36336166
chr1 235105086 235105096 MNT JASPAR yes 36336167
chr1 235105086 235105096 TFE3 JASPAR yes 36336168
chr1 235105086 235105096 TFEB JASPAR yes 36336169
chr1 235105086 235105096 CLOCK JASPAR yes 118486508
chr1 235105086 235105096 MAX JASPAR yes 118486509
chr1 235105086 235105096 MLX JASPAR yes 118486510
chr1 235105086 235105096 MNT JASPAR yes 118486511
chr1 235105086 235105096 TFE3 JASPAR yes 118486512
chr1 235105086 235105096 TFEB JASPAR yes 118486513
chr1 235105086 235105097 USF1 JASPAR yes 36336170
chr1 235105086 235105097 USF2 JASPAR yes 36336171
chr1 235105086 235105097 USF1 JASPAR yes 118486514
chr1 235105086 235105097 USF2 JASPAR yes 118486515
chr1 235105087 235105094 USF1 JASPAR yes 36336172
chr1 235105087 235105094 USF1 JASPAR yes 118486516
chr1 235105087 235105097 MAX JASPAR yes 36336173
chr1 235105087 235105097 MAX JASPAR yes 118486517
chr1 235105088 235105093 MYC TRANSFAC yes 36336174
chr1 235105088 235105093 USF1 TRANSFAC yes 36336175
chr1 235105088 235105093 USF2 TRANSFAC yes 36336176
chr1 235105088 235105093 MYC TRANSFAC yes 118486518
chr1 235105088 235105093 USF1 TRANSFAC yes 118486519
chr1 235105088 235105093 USF2 TRANSFAC yes 118486520
chr1 235105088 235105095 USF1 JASPAR yes 36336177
chr1 235105088 235105095 USF1 JASPAR yes 118486521
chr1 235105093 235105097 H4TF2 TRANSFAC yes 36336178
chr1 235105093 235105097 H4TF2 TRANSFAC yes 118486522
chr1 235105093 235105113 TP63 JASPAR yes 36336179
chr1 235105093 235105113 TP63 JASPAR yes 118486523
chr1 235105121 235105125 TEAD2 TRANSFAC yes 36336180
chr1 235105121 235105125 TEAD2 TRANSFAC yes 118486524
chr1 235105121 235105126 TBP TRANSFAC yes 36336181
chr1 235105121 235105126 TBP TRANSFAC yes 118486525
chr1 235105122 235105137 SCRT1 JASPAR yes 36336182
chr1 235105122 235105137 SCRT1 JASPAR yes 118486526
chr1 235105124 235105137 SCRT2 JASPAR yes 36336183
chr1 235105124 235105137 SCRT2 JASPAR yes 118486527
chr1 235105139 235105147 FOXO3 JASPAR yes 36336184
chr1 235105139 235105147 FOXO3 JASPAR yes 118486528
chr1 235105148 235105162 RXRB JASPAR yes 36336185
chr1 235105148 235105162 RXRG JASPAR yes 36336186
chr1 235105148 235105162 RXRB JASPAR yes 118486529
chr1 235105148 235105162 RXRG JASPAR yes 118486530
chr1 235105148 235105163 NR2C2 JASPAR yes 36336187
chr1 235105148 235105163 NR2C2 JASPAR yes 118486531
SNP sites on vista5672[chr1:235104770-235105153]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 235104826 rs192741963 G A no 1048366
chr1 235104839 rs117524618 G A no 1048367
chr1 235104852 rs373222121 C T no 1048368
chr1 235104860 rs140542574 A G,T
GATA2 GATA3 GATA5 MEF2A MEF2C MYB
1048369
chr1 235104928 rs17593743 A C
NFATC3
1048370
chr1 235104961 rs3862046 T G no 1048371
Genes possibly regulated by vista5672[chr1:235104770-235105153]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5672[chr1:235104770-235105153]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results