EnhancerDB
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  3. vista5677[chr1:235110834-235111403]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5677[chr1:235110834-235111403]
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Tissue distribution of vista5677
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Transcription factor that possibly regulate vista5677[chr1:235110834-235111403]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 235110671 235111293 STAT1 UCSC Txn Factor no Conserved 107884962
chr1 235110689 235111391 EP300 UCSC Txn Factor no Conserved 107884964
chr1 235110714 235111326 TCF12 UCSC Txn Factor no Conserved 107884967
chr1 235110722 235111300 FOSL2 UCSC Txn Factor no Conserved 107884970
chr1 235110745 235111500 TCF7L2 UCSC Txn Factor no Conserved 107884974
chr1 235110748 235111369 RCOR1 UCSC Txn Factor no Conserved 107884977
chr1 235110753 235111333 JUND UCSC Txn Factor no Conserved 107884979
chr1 235110791 235111474 GATA2 UCSC Txn Factor no Conserved 107884990
chr1 235110792 235111255 BCL3 UCSC Txn Factor no Conserved 107884991
chr1 235110799 235111401 NFIC UCSC Txn Factor no Conserved 107884999
chr1 235110802 235111247 GATA1 UCSC Txn Factor no Conserved 107885000
chr1 235110805 235111177 CEBPB UCSC Txn Factor no Conserved 107885002
chr1 235110818 235111207 NR3C1 UCSC Txn Factor no Conserved 107885009
chr1 235110819 235111251 TEAD4 UCSC Txn Factor no Conserved 107885010
chr1 235110823 235111294 REST UCSC Txn Factor no Conserved 107885015
chr1 235110827 235111250 JUNB UCSC Txn Factor no Conserved 107885018
chr1 235110829 235111179 STAT5A UCSC Txn Factor no Conserved 107885023
chr1 235110840 235111241 FOXA1 UCSC Txn Factor no Conserved 107885036
chr1 235110840 235111321 JUN UCSC Txn Factor no Conserved 107885038
chr1 235110847 235111231 FOXA2 UCSC Txn Factor no Conserved 107885041
chr1 235110852 235111194 GABPA UCSC Txn Factor no Conserved 107885044
chr1 235110853 235111389 FOS UCSC Txn Factor no Conserved 107885045
chr1 235110858 235111211 ATF3 UCSC Txn Factor no Conserved 107885051
chr1 235110874 235111250 CCNT2 UCSC Txn Factor no Conserved 107885063
chr1 235110893 235111255 NR2F2 UCSC Txn Factor no Conserved 107885075
chr1 235110898 235111174 ZBTB33 UCSC Txn Factor no Conserved 107885079
chr1 235110900 235111253 STAT3 UCSC Txn Factor no Conserved 107885081
chr1 235110910 235111116 TAL1 UCSC Txn Factor no Conserved 107885086
chr1 235110961 235111224 RXRA UCSC Txn Factor no Conserved 107885111
chr1 235110992 235111322 NFYB UCSC Txn Factor no Conserved 107885124
chr1 235111014 235111338 NFYA UCSC Txn Factor no Conserved 107885137
chr1 235110828 235110841 HSF2 JASPAR yes 36337035
chr1 235110828 235110841 HSF2 JASPAR yes 118486697
chr1 235110833 235110846 HSF2 JASPAR yes 36337036
chr1 235110833 235110846 HSF2 JASPAR yes 118486698
chr1 235110842 235110851 NKX2-8 JASPAR yes 36337037
chr1 235110842 235110851 NKX2-8 JASPAR yes 118486699
chr1 235110842 235110852 NKX2-3 JASPAR yes 36337038
chr1 235110842 235110852 NKX2-3 JASPAR yes 118486700
chr1 235110853 235110863 RORA JASPAR yes 36337039
chr1 235110853 235110863 RORA JASPAR yes 118486701
chr1 235110858 235110862 ESR1 TRANSFAC yes 36337040
chr1 235110858 235110862 ESR1 TRANSFAC yes 118486702
chr1 235110865 235110871 LEF1 TRANSFAC yes 36337041
chr1 235110865 235110871 SOX10 JASPAR yes 36337042
chr1 235110865 235110871 LEF1 TRANSFAC yes 118486703
chr1 235110865 235110871 SOX10 JASPAR yes 118486704
chr1 235110882 235110887 ETS2 TRANSFAC yes 36337043
chr1 235110882 235110887 ETS2 TRANSFAC yes 118486705
chr1 235110887 235110898 NFE2L2 JASPAR yes 36337044
chr1 235110887 235110898 NFE2L2 JASPAR yes 118486706
chr1 235110890 235110896 JUN TRANSFAC yes 36337045
chr1 235110890 235110896 JUN TRANSFAC yes 118486707
chr1 235110896 235110908 INSM1 JASPAR yes 36337046
chr1 235110896 235110908 INSM1 JASPAR yes 118486708
chr1 235110900 235110909 CDX1 JASPAR yes 36337047
chr1 235110900 235110909 CDX1 JASPAR yes 118486709
chr1 235110900 235110910 HOXA13 JASPAR yes 36337048
chr1 235110900 235110910 HOXB13 JASPAR yes 36337049
chr1 235110900 235110910 HOXD13 JASPAR yes 36337050
chr1 235110900 235110910 HOXA13 JASPAR yes 118486710
chr1 235110900 235110910 HOXB13 JASPAR yes 118486711
chr1 235110900 235110910 HOXD13 JASPAR yes 118486712
chr1 235110912 235110926 JUN JASPAR yes 36337051
chr1 235110912 235110926 JUN JASPAR yes 118486713
chr1 235110914 235110925 BATF JASPAR yes 36337052
chr1 235110914 235110925 BATF JASPAR yes 118486714
chr1 235110915 235110926 FOSL2 JASPAR yes 36337053
chr1 235110915 235110926 JUNB JASPAR yes 36337054
chr1 235110915 235110926 FOSL2 JASPAR yes 118486715
chr1 235110915 235110926 JUNB JASPAR yes 118486716
chr1 235110916 235110927 FOS JASPAR yes 36337055
chr1 235110916 235110927 FOSL1 JASPAR yes 36337056
chr1 235110916 235110927 JUND JASPAR yes 36337057
chr1 235110916 235110927 NFE2 JASPAR yes 36337058
chr1 235110916 235110927 FOS JASPAR yes 118486717
chr1 235110916 235110927 FOSL1 JASPAR yes 118486718
chr1 235110916 235110927 JUND JASPAR yes 118486719
chr1 235110916 235110927 NFE2 JASPAR yes 118486720
chr1 235110917 235110926 JDP2 JASPAR yes 36337059
chr1 235110917 235110926 JDP2 JASPAR yes 118486721
chr1 235110917 235110928 FOSL2 JASPAR yes 36337060
chr1 235110917 235110928 JUNB JASPAR yes 36337061
chr1 235110917 235110928 FOSL2 JASPAR yes 118486722
chr1 235110917 235110928 JUNB JASPAR yes 118486723
chr1 235110917 235110931 JUN JASPAR yes 36337062
chr1 235110917 235110931 JUN JASPAR yes 118486724
chr1 235110949 235110954 ETS2 TRANSFAC yes 36337063
chr1 235110949 235110954 ETS2 TRANSFAC yes 118486725
chr1 235110962 235110972 SREBF1 JASPAR yes 36337064
chr1 235110962 235110972 SREBF2 JASPAR yes 36337065
chr1 235110962 235110972 SREBF1 JASPAR yes 118486726
chr1 235110962 235110972 SREBF2 JASPAR yes 118486727
chr1 235110971 235110975 YY1 TRANSFAC yes 36337066
chr1 235110971 235110975 YY1 TRANSFAC yes 118486728
chr1 235110984 235111001 BCL6B JASPAR yes 36337067
chr1 235110984 235111001 BCL6B JASPAR yes 118486729
chr1 235110990 235111001 FOXA1 JASPAR yes 36337068
chr1 235110990 235111001 FOXA1 JASPAR yes 118486730
chr1 235110990 235111005 FOXA1 JASPAR yes 36337069
chr1 235110990 235111005 FOXA1 JASPAR yes 118486731
chr1 235110991 235111003 FOXC2 JASPAR yes 36337070
chr1 235110991 235111003 FOXC2 JASPAR yes 118486732
chr1 235110994 235111003 SRY JASPAR yes 36337071
chr1 235110994 235111003 SRY JASPAR yes 118486733
chr1 235110996 235111005 SOX9 JASPAR yes 36337072
chr1 235110996 235111005 SOX9 JASPAR yes 118486734
chr1 235110997 235111013 SOX8 JASPAR yes 36337073
chr1 235110997 235111013 SOX8 JASPAR yes 118486735
chr1 235111006 235111017 CEBPB JASPAR yes 36337074
chr1 235111006 235111017 CEBPB JASPAR yes 118486736
chr1 235111006 235111018 HLF JASPAR yes 36337075
chr1 235111006 235111018 HLF JASPAR yes 118486737
chr1 235111007 235111018 CEBPA JASPAR yes 36337076
chr1 235111007 235111018 CEBPA JASPAR yes 118486738
chr1 235111012 235111021 VENTX JASPAR yes 36337077
chr1 235111012 235111021 VENTX JASPAR yes 118486739
chr1 235111021 235111025 ESR1 TRANSFAC yes 36337078
chr1 235111021 235111025 ESR1 TRANSFAC yes 118486740
chr1 235111080 235111083 MYB TRANSFAC yes 36337079
chr1 235111080 235111083 MYB TRANSFAC yes 118486741
chr1 235111082 235111093 FOXB1 JASPAR yes 36337080
chr1 235111082 235111093 FOXB1 JASPAR yes 118486742
chr1 235111083 235111087 NFE TRANSFAC yes 36337081
chr1 235111083 235111087 NFE TRANSFAC yes 118486743
chr1 235111083 235111090 MEIS1 JASPAR yes 36337082
chr1 235111083 235111090 MEIS1 JASPAR yes 118486744
chr1 235111090 235111094 YY1 TRANSFAC yes 36337083
chr1 235111090 235111094 YY1 TRANSFAC yes 118486745
chr1 235111090 235111105 STAT1 JASPAR yes 36337084
chr1 235111090 235111105 STAT1 JASPAR yes 118486746
chr1 235111092 235111103 STAT1 JASPAR yes 36337085
chr1 235111092 235111103 STAT1 JASPAR yes 118486747
chr1 235111105 235111114 NKX3-2 JASPAR yes 36337086
chr1 235111105 235111114 NKX3-2 JASPAR yes 118486748
chr1 235111105 235111115 NKX2-3 JASPAR yes 36337087
chr1 235111105 235111115 NKX2-3 JASPAR yes 118486749
chr1 235111106 235111114 ISL2 JASPAR yes 36337088
chr1 235111106 235111114 ISL2 JASPAR yes 118486750
chr1 235111111 235111114 MYB TRANSFAC yes 36337089
chr1 235111111 235111114 MYB TRANSFAC yes 118486751
chr1 235111140 235111154 JUN JASPAR yes 36337090
chr1 235111140 235111154 JUN JASPAR yes 118486752
chr1 235111142 235111153 BATF JASPAR yes 36337091
chr1 235111142 235111153 BATF JASPAR yes 118486753
chr1 235111143 235111154 FOSL2 JASPAR yes 36337092
chr1 235111143 235111154 JUNB JASPAR yes 36337093
chr1 235111143 235111154 FOSL2 JASPAR yes 118486754
chr1 235111143 235111154 JUNB JASPAR yes 118486755
chr1 235111144 235111153 NFE2 TRANSFAC yes 36337094
chr1 235111144 235111153 NFE2 TRANSFAC yes 118486756
chr1 235111144 235111155 FOS JASPAR yes 36337095
chr1 235111144 235111155 FOSL1 JASPAR yes 36337096
chr1 235111144 235111155 JUND JASPAR yes 36337097
chr1 235111144 235111155 NFE2 JASPAR yes 36337098
chr1 235111144 235111155 FOS JASPAR yes 118486757
chr1 235111144 235111155 FOSL1 JASPAR yes 118486758
chr1 235111144 235111155 JUND JASPAR yes 118486759
chr1 235111144 235111155 NFE2 JASPAR yes 118486760
chr1 235111145 235111154 JDP2 JASPAR yes 36337099
chr1 235111145 235111154 JDP2 JASPAR yes 118486761
chr1 235111145 235111156 FOSL2 JASPAR yes 36337100
chr1 235111145 235111156 JUNB JASPAR yes 36337101
chr1 235111145 235111156 FOSL2 JASPAR yes 118486762
chr1 235111145 235111156 JUNB JASPAR yes 118486763
chr1 235111145 235111159 JUN JASPAR yes 36337102
chr1 235111145 235111159 JUN JASPAR yes 118486764
chr1 235111146 235111157 BATF JASPAR yes 36337103
chr1 235111146 235111157 BATF JASPAR yes 118486765
chr1 235111151 235111161 NFIA JASPAR yes 36337104
chr1 235111151 235111161 NFIA JASPAR yes 118486766
chr1 235111153 235111159 NFIC JASPAR yes 36337105
chr1 235111153 235111159 NFIC JASPAR yes 118486767
chr1 235111162 235111177 LEF1 JASPAR yes 36337106
chr1 235111162 235111177 LEF1 JASPAR yes 118486768
chr1 235111167 235111175 GATA3 JASPAR yes 36337107
chr1 235111167 235111175 GATA3 JASPAR yes 118486769
chr1 235111178 235111182 ESR1 TRANSFAC yes 36337108
chr1 235111178 235111182 ESR1 TRANSFAC yes 118486770
chr1 235111189 235111207 NFYA JASPAR yes 36337109
chr1 235111189 235111207 NFYA JASPAR yes 118486771
chr1 235111192 235111208 NFYA JASPAR yes 36337110
chr1 235111192 235111208 NFYA JASPAR yes 118486772
chr1 235111195 235111210 NFYB JASPAR yes 36337111
chr1 235111195 235111210 NFYB JASPAR yes 118486773
chr1 235111211 235111216 NFY TRANSFAC yes 36337112
chr1 235111211 235111216 NFY TRANSFAC yes 118486774
chr1 235111216 235111234 RARA JASPAR yes 36337113
chr1 235111216 235111234 RARA JASPAR yes 118486775
chr1 235111226 235111230 ESR1 TRANSFAC yes 36337114
chr1 235111226 235111230 ESR1 TRANSFAC yes 118486776
chr1 235111284 235111288 YY1 TRANSFAC yes 36337115
chr1 235111284 235111288 YY1 TRANSFAC yes 118486777
chr1 235111289 235111304 PRDM1 JASPAR yes 36337116
chr1 235111289 235111304 STAT2 JASPAR yes 36337117
chr1 235111289 235111304 PRDM1 JASPAR yes 118486778
chr1 235111289 235111304 STAT2 JASPAR yes 118486779
chr1 235111294 235111300 TCF4 TRANSFAC yes 36337118
chr1 235111294 235111300 TCF4 TRANSFAC yes 118486780
chr1 235111323 235111341 TP73 JASPAR yes 36337119
chr1 235111323 235111341 TP73 JASPAR yes 118486781
chr1 235111339 235111351 FOXI1 JASPAR yes 36337120
chr1 235111339 235111351 FOXI1 JASPAR yes 118486782
chr1 235111342 235111346 YY1 TRANSFAC yes 36337121
chr1 235111342 235111346 YY1 TRANSFAC yes 118486783
chr1 235111342 235111357 FOXA1 JASPAR yes 36337122
chr1 235111342 235111357 FOXA1 JASPAR yes 118486784
chr1 235111343 235111355 FOXI1 JASPAR yes 36337123
chr1 235111343 235111355 FOXI1 JASPAR yes 118486785
chr1 235111343 235111358 FOXP1 JASPAR yes 36337124
chr1 235111343 235111358 FOXP1 JASPAR yes 118486786
chr1 235111344 235111356 FOXC2 JASPAR yes 36337125
chr1 235111344 235111356 FOXC2 JASPAR yes 118486787
chr1 235111346 235111357 FOXA1 JASPAR yes 36337126
chr1 235111346 235111357 FOXA1 JASPAR yes 118486788
chr1 235111347 235111362 FOXP1 JASPAR yes 36337127
chr1 235111347 235111362 FOXP1 JASPAR yes 118486789
chr1 235111348 235111359 FOXP2 JASPAR yes 36337128
chr1 235111348 235111359 FOXP2 JASPAR yes 118486790
chr1 235111348 235111360 FOXC2 JASPAR yes 36337129
chr1 235111348 235111360 FOXC2 JASPAR yes 118486791
chr1 235111348 235111366 NFYA JASPAR yes 36337130
chr1 235111348 235111366 NFYA JASPAR yes 118486792
chr1 235111351 235111367 NFYA JASPAR yes 36337131
chr1 235111351 235111367 NFYA JASPAR yes 118486793
chr1 235111352 235111362 HOXA13 JASPAR yes 36337132
chr1 235111352 235111362 HOXB13 JASPAR yes 36337133
chr1 235111352 235111362 HOXD13 JASPAR yes 36337134
chr1 235111352 235111362 HOXA13 JASPAR yes 118486794
chr1 235111352 235111362 HOXB13 JASPAR yes 118486795
chr1 235111352 235111362 HOXD13 JASPAR yes 118486796
chr1 235111352 235111363 HOXA10 JASPAR yes 36337135
chr1 235111352 235111363 HOXA10 JASPAR yes 118486797
chr1 235111353 235111362 CDX1 JASPAR yes 36337136
chr1 235111353 235111362 CDX1 JASPAR yes 118486798
chr1 235111353 235111364 CDX2 JASPAR yes 36337137
chr1 235111353 235111364 CDX2 JASPAR yes 118486799
chr1 235111361 235111371 HMBOX1 JASPAR yes 36337138
chr1 235111361 235111371 HMBOX1 JASPAR yes 118486800
chr1 235111363 235111366 MYB TRANSFAC yes 36337139
chr1 235111363 235111366 MYB TRANSFAC yes 118486801
chr1 235111367 235111382 MEF2A JASPAR yes 36337140
chr1 235111367 235111382 MEF2A JASPAR yes 118486802
chr1 235111380 235111395 RFX5 JASPAR yes 36337141
chr1 235111380 235111395 RFX5 JASPAR yes 118486803
chr1 235111391 235111396 ETS2 TRANSFAC yes 36337142
chr1 235111391 235111396 ETS2 TRANSFAC yes 118486804
SNP sites on vista5677[chr1:235110834-235111403]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 235110836 rs79387861 C G
BCL3 CEBPB EP300 FOSL2 GATA1 GATA2 HSF2 JUNB JUND NFIC NR3C1 RCOR1 REST STAT1 STAT5A TCF12 TCF7L2 TEAD4
1048461
chr1 235110859 rs3738622 G C,T
ATF3 BCL3 CEBPB EP300 ESR1 FOS FOSL2 FOXA1 FOXA2 GABPA GATA1 GATA2 JUN JUNB JUND NFIC NR3C1 RCOR1 REST RORA STAT1 STAT5A TCF12 TCF7L2 TEAD4
1048462
chr1 235110881 rs578179791 C T
ATF3 BCL3 CCNT2 CEBPB EP300 FOS FOSL2 FOXA1 FOXA2 GABPA GATA1 GATA2 JUN JUNB JUND NFIC NR3C1 RCOR1 REST STAT1 STAT5A TCF12 TCF7L2 TEAD4
1048463
chr1 235110916 rs3841840 C CT
ATF3 BATF BCL3 CCNT2 CEBPB EP300 FOS FOSL1 FOSL2 FOXA1 FOXA2 GABPA GATA1 GATA2 JUN JUNB JUND NFE2 NFIC NR2F2 NR3C1 RCOR1 REST STAT1 STAT3 STAT5A TAL1 TCF12 TCF7L2 TEAD4 ZBTB33
1048464
chr1 235110916 rs397698818 C CT
ATF3 BATF BCL3 CCNT2 CEBPB EP300 FOS FOSL1 FOSL2 FOXA1 FOXA2 GABPA GATA1 GATA2 JUN JUNB JUND NFE2 NFIC NR2F2 NR3C1 RCOR1 REST STAT1 STAT3 STAT5A TAL1 TCF12 TCF7L2 TEAD4 ZBTB33
1048465
chr1 235111050 rs7512010 T A
ATF3 BCL3 CCNT2 CEBPB EP300 FOS FOSL2 FOXA1 FOXA2 GABPA GATA1 GATA2 JUN JUNB JUND NFIC NFYA NFYB NR2F2 NR3C1 RCOR1 REST RXRA STAT1 STAT3 STAT5A TAL1 TCF12 TCF7L2 TEAD4 ZBTB33
1048466
chr1 235111140 rs186613874 C G
ATF3 BCL3 CCNT2 CEBPB EP300 FOS FOSL2 FOXA1 FOXA2 GABPA GATA1 GATA2 JUN JUNB JUND NFIC NFYA NFYB NR2F2 NR3C1 RCOR1 REST RXRA STAT1 STAT3 STAT5A TCF12 TCF7L2 TEAD4 ZBTB33
1048467
chr1 235111232 rs191105765 C G
BCL3 CCNT2 EP300 FOS FOSL2 FOXA1 GATA1 GATA2 JUN JUNB JUND NFIC NFYA NFYB NR2F2 RARA RCOR1 REST STAT1 STAT3 TCF12 TCF7L2 TEAD4
1048468
chr1 235111251 rs551496752 C A
BCL3 EP300 FOS FOSL2 GATA2 JUN JUND NFIC NFYA NFYB NR2F2 RCOR1 REST STAT1 STAT3 TCF12 TCF7L2 TEAD4
1048469
chr1 235111267 rs141527658 G T
EP300 FOS FOSL2 GATA2 JUN JUND NFIC NFYA NFYB RCOR1 REST STAT1 TCF12 TCF7L2
1048470
chr1 235111326 rs146185623 C T
EP300 FOS GATA2 JUND NFIC NFYA RCOR1 TCF12 TCF7L2 TP73
1048471
chr1 235111328 rs115044932 C T
EP300 FOS GATA2 JUND NFIC NFYA RCOR1 TCF7L2 TP73
1048472
Genes possibly regulated by vista5677[chr1:235110834-235111403]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5677[chr1:235110834-235111403]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results