EnhancerDB
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  3. vista568[chr1:17865185-17865523]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista568[chr1:17865185-17865523]
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Tissue distribution of vista568
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Transcription factor that possibly regulate vista568[chr1:17865185-17865523]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 17865185 17865200 FOXP1 JASPAR yes 118241079
chr1 17865186 17865201 FOXP1 JASPAR yes 118241080
chr1 17865187 17865193 TBP TRANSFAC yes 118241081
chr1 17865187 17865202 FOXP1 JASPAR yes 118241082
chr1 17865187 17865208 IRF1 JASPAR yes 118241083
chr1 17865188 17865203 FOXP1 JASPAR yes 118241084
chr1 17865188 17865209 IRF1 JASPAR yes 118241085
chr1 17865189 17865204 FOXP1 JASPAR yes 118241086
chr1 17865189 17865210 IRF1 JASPAR yes 118241087
chr1 17865190 17865205 FOXP1 JASPAR yes 118241088
chr1 17865190 17865211 IRF1 JASPAR yes 118241089
chr1 17865191 17865206 FOXP1 JASPAR yes 118241090
chr1 17865192 17865207 FOXP1 JASPAR yes 118241091
chr1 17865193 17865208 FOXP1 JASPAR yes 118241092
chr1 17865193 17865214 IRF1 JASPAR yes 118241093
chr1 17865194 17865209 FOXP1 JASPAR yes 118241094
chr1 17865197 17865212 PRDM1 JASPAR yes 118241095
chr1 17865197 17865212 STAT2 JASPAR yes 118241096
chr1 17865214 17865229 RUNX2 JASPAR yes 118241097
chr1 17865230 17865235 ETS2 TRANSFAC yes 118241098
chr1 17865250 17865255 H4TF1 TRANSFAC yes 118241099
chr1 17865264 17865274 ID4 JASPAR yes 118241100
chr1 17865264 17865274 TCF3 JASPAR yes 118241101
chr1 17865264 17865274 TCF4 JASPAR yes 118241102
chr1 17865265 17865274 SNAI2 JASPAR yes 118241103
chr1 17865266 17865271 USF2 TRANSFAC yes 118241104
chr1 17865292 17865310 RARA JASPAR yes 118241105
chr1 17865298 17865302 YY1 TRANSFAC yes 118241106
chr1 17865313 17865331 MAFF JASPAR yes 118241107
chr1 17865314 17865322 DLX6 JASPAR yes 118241108
chr1 17865314 17865322 MSX1 JASPAR yes 118241109
chr1 17865315 17865326 NRL JASPAR yes 118241110
chr1 17865315 17865330 MAFK JASPAR yes 118241111
chr1 17865322 17865328 GATA1 TRANSFAC yes 118241112
chr1 17865336 17865346 RELA JASPAR yes 118241113
chr1 17865340 17865348 FEV JASPAR yes 118241114
chr1 17865342 17865347 ETS2 TRANSFAC yes 118241115
chr1 17865376 17865379 MYB TRANSFAC yes 118241116
chr1 17865388 17865393 GATA2 JASPAR yes 118241117
chr1 17865392 17865408 POU4F2 JASPAR yes 118241118
chr1 17865392 17865408 POU4F3 JASPAR yes 118241119
chr1 17865395 17865405 EMX1 JASPAR yes 118241120
chr1 17865395 17865405 EMX2 JASPAR yes 118241121
chr1 17865395 17865405 GSX1 JASPAR yes 118241122
chr1 17865395 17865405 LHX2 JASPAR yes 118241123
chr1 17865395 17865405 LHX6 JASPAR yes 118241124
chr1 17865395 17865405 MIXL1 JASPAR yes 118241125
chr1 17865395 17865405 MNX1 JASPAR yes 118241126
chr1 17865395 17865405 NOTO JASPAR yes 118241127
chr1 17865395 17865405 POU6F1 JASPAR yes 118241128
chr1 17865395 17865405 RAX JASPAR yes 118241129
chr1 17865396 17865404 ISX JASPAR yes 118241130
chr1 17865396 17865404 LMX1A JASPAR yes 118241131
chr1 17865396 17865404 LMX1B JASPAR yes 118241132
chr1 17865396 17865404 NKX6-1 JASPAR yes 118241133
chr1 17865396 17865404 NKX6-2 JASPAR yes 118241134
chr1 17865396 17865404 PRRX1 JASPAR yes 118241135
chr1 17865396 17865404 RAX2 JASPAR yes 118241136
chr1 17865396 17865404 SHOX JASPAR yes 118241137
chr1 17865396 17865404 UNCX JASPAR yes 118241138
chr1 17865396 17865404 VAX1 JASPAR yes 118241139
chr1 17865397 17865407 PAX7 JASPAR yes 118241140
chr1 17865398 17865408 HOXC10 JASPAR yes 118241141
chr1 17865398 17865409 HOXC11 JASPAR yes 118241142
chr1 17865399 17865409 EMX1 JASPAR yes 118241143
chr1 17865399 17865409 MEOX2 JASPAR yes 118241144
chr1 17865400 17865408 NKX6-1 JASPAR yes 118241145
chr1 17865400 17865410 POU6F2 JASPAR yes 118241146
chr1 17865403 17865413 SREBF2 JASPAR yes 118241147
chr1 17865412 17865415 MYB TRANSFAC yes 118241148
chr1 17865416 17865426 EMX1 JASPAR yes 118241149
chr1 17865416 17865426 GSX2 JASPAR yes 118241150
chr1 17865416 17865426 HOXB2 JASPAR yes 118241151
chr1 17865416 17865426 MEOX2 JASPAR yes 118241152
chr1 17865416 17865426 MNX1 JASPAR yes 118241153
chr1 17865417 17865425 LMX1A JASPAR yes 118241154
chr1 17865417 17865425 LMX1B JASPAR yes 118241155
chr1 17865417 17865425 NKX6-1 JASPAR yes 118241156
chr1 17865417 17865425 NKX6-2 JASPAR yes 118241157
chr1 17865417 17865425 PDX1 JASPAR yes 118241158
chr1 17865417 17865425 VAX1 JASPAR yes 118241159
chr1 17865417 17865425 VAX2 JASPAR yes 118241160
chr1 17865417 17865425 VSX1 JASPAR yes 118241161
chr1 17865418 17865428 PAX3 JASPAR yes 118241162
chr1 17865418 17865428 PAX7 JASPAR yes 118241163
chr1 17865421 17865429 BARX1 JASPAR yes 118241164
chr1 17865421 17865429 BSX JASPAR yes 118241165
chr1 17865421 17865429 ISL2 JASPAR yes 118241166
chr1 17865421 17865429 LMX1B JASPAR yes 118241167
chr1 17865421 17865429 MSX1 JASPAR yes 118241168
chr1 17865421 17865429 MSX2 JASPAR yes 118241169
chr1 17865421 17865434 DUXA JASPAR yes 118241170
chr1 17865422 17865433 DUX4 JASPAR yes 118241171
chr1 17865422 17865433 PHOX2A JASPAR yes 118241172
chr1 17865423 17865434 CEBPB JASPAR yes 118241173
chr1 17865423 17865436 ATF4 JASPAR yes 118241174
chr1 17865423 17865438 JUND JASPAR yes 118241175
chr1 17865424 17865435 CEBPA JASPAR yes 118241176
chr1 17865424 17865437 JUN JASPAR yes 118241177
chr1 17865433 17865438 GATA2 JASPAR yes 118241178
chr1 17865478 17865484 NFIC JASPAR yes 118241179
chr1 17865489 17865510 ZNF263 JASPAR yes 118241180
chr1 17865494 17865500 TCF4 TRANSFAC yes 118241181
SNP sites on vista568[chr1:17865185-17865523]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 17865188 rs35238374 TA T
FOXP1 IRF1 TBP
119788
chr1 17865188 rs397862274 TA T
FOXP1 IRF1 TBP
119789
chr1 17865188 rs60310826 TA T
FOXP1 IRF1 TBP
119790
chr1 17865188 rs764492184 TA T
FOXP1 IRF1 TBP
119791
chr1 17865254 rs145783055 T G
H4TF1
119792
chr1 17865265 rs568841957 TGC T
ID4 SNAI2 TCF3 TCF4
119793
Genes possibly regulated by vista568[chr1:17865185-17865523]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 17733256 17766220 - RCC2 ENSG00000179051.9 17766220 0.74 1.0 246 1035
chr1 17866330 18024369 + ARHGEF10L ENSG00000074964.12 17866330 0.8 1.0 247 99193
Expression level of Genes
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miRNAs possibly regulated by vista568[chr1:17865185-17865523]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results