EnhancerDB
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  3. vista5688[chr1:235154947-235155120]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5688[chr1:235154947-235155120]
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Tissue distribution of vista5688
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Transcription factor that possibly regulate vista5688[chr1:235154947-235155120]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 235154838 235155114 EGR1 UCSC Txn Factor no Conserved 107885641
chr1 235154963 235154966 MYB TRANSFAC yes 36343168
chr1 235154963 235154966 MYB TRANSFAC yes 118487434
chr1 235154966 235154970 YY1 TRANSFAC yes 36343169
chr1 235154966 235154970 YY1 TRANSFAC yes 118487435
chr1 235154969 235154972 MYB TRANSFAC yes 36343170
chr1 235154969 235154972 MYB TRANSFAC yes 118487436
chr1 235154984 235154994 MAX JASPAR yes 36343171
chr1 235154984 235154994 MAX JASPAR yes 118487437
chr1 235154984 235154995 USF2 JASPAR yes 36343172
chr1 235154984 235154995 USF2 JASPAR yes 118487438
chr1 235154985 235154995 TFE3 JASPAR yes 36343173
chr1 235154985 235154995 TFEB JASPAR yes 36343174
chr1 235154985 235154995 TFEC JASPAR yes 36343175
chr1 235154985 235154995 TFE3 JASPAR yes 118487439
chr1 235154985 235154995 TFEB JASPAR yes 118487440
chr1 235154985 235154995 TFEC JASPAR yes 118487441
chr1 235154985 235154996 USF1 JASPAR yes 36343176
chr1 235154985 235154996 USF1 JASPAR yes 118487442
chr1 235154998 235155003 SP1 TRANSFAC yes 36343177
chr1 235154998 235155003 SP1 TRANSFAC yes 118487443
chr1 235154998 235155010 GLI2 JASPAR yes 36343178
chr1 235154998 235155010 GLI2 JASPAR yes 118487444
chr1 235155010 235155025 HNF4A JASPAR yes 36343179
chr1 235155010 235155025 HNF4A JASPAR yes 118487445
chr1 235155011 235155025 RXRG JASPAR yes 36343180
chr1 235155011 235155025 RXRG JASPAR yes 118487446
chr1 235155011 235155026 HNF4G JASPAR yes 36343181
chr1 235155011 235155026 HNF4G JASPAR yes 118487447
chr1 235155016 235155036 TP53 JASPAR yes 36343182
chr1 235155016 235155036 TP53 JASPAR yes 118487448
chr1 235155017 235155032 TP53 JASPAR yes 36343183
chr1 235155017 235155032 TP53 JASPAR yes 118487449
chr1 235155021 235155030 HIC2 JASPAR yes 36343184
chr1 235155021 235155030 HIC2 JASPAR yes 118487450
chr1 235155024 235155028 LFA1 TRANSFAC yes 36343185
chr1 235155024 235155028 LFA1 TRANSFAC yes 118487451
chr1 235155024 235155041 PAX9 JASPAR yes 36343186
chr1 235155024 235155041 PAX9 JASPAR yes 118487452
chr1 235155051 235155061 MAX JASPAR yes 36343187
chr1 235155051 235155061 MAX JASPAR yes 118487453
chr1 235155064 235155078 GLIS3 JASPAR yes 36343188
chr1 235155064 235155078 GLIS3 JASPAR yes 118487454
chr1 235155117 235155125 RHOXF1 JASPAR yes 36343189
chr1 235155117 235155125 RHOXF1 JASPAR yes 118487455
SNP sites on vista5688[chr1:235154947-235155120]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 235154952 rs191098972 A G
EGR1
1049043
Genes possibly regulated by vista5688[chr1:235154947-235155120]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5688[chr1:235154947-235155120]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results