EnhancerDB
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  3. vista5689[chr1:235158479-235158766]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5689[chr1:235158479-235158766]
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Tissue distribution of vista5689
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Transcription factor that possibly regulate vista5689[chr1:235158479-235158766]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 235158476 235158497 ZNF263 JASPAR yes 36343694
chr1 235158476 235158497 ZNF263 JASPAR yes 118487456
chr1 235158487 235158494 SPIB JASPAR yes 36343695
chr1 235158487 235158494 SPIB JASPAR yes 118487457
chr1 235158493 235158498 ETS2 TRANSFAC yes 36343696
chr1 235158493 235158498 ETS2 TRANSFAC yes 118487458
chr1 235158495 235158509 BATF3 JASPAR yes 36343697
chr1 235158495 235158509 BATF3 JASPAR yes 118487459
chr1 235158502 235158512 TFAP4 JASPAR yes 36343698
chr1 235158502 235158512 TFAP4 JASPAR yes 118487460
chr1 235158577 235158596 RFX2 JASPAR yes 36343699
chr1 235158577 235158596 RFX2 JASPAR yes 118487461
chr1 235158579 235158594 RFX5 JASPAR yes 36343700
chr1 235158579 235158594 RFX5 JASPAR yes 118487462
chr1 235158592 235158610 SRF JASPAR yes 36343701
chr1 235158592 235158610 SRF JASPAR yes 118487463
chr1 235158616 235158626 TFCP2 JASPAR yes 36343702
chr1 235158616 235158626 TFCP2 JASPAR yes 118487464
chr1 235158628 235158642 MTF1 JASPAR yes 36343703
chr1 235158628 235158642 MTF1 JASPAR yes 118487465
chr1 235158634 235158644 NFATC3 JASPAR yes 36343704
chr1 235158634 235158644 NFATC3 JASPAR yes 118487466
chr1 235158636 235158643 NFATC2 JASPAR yes 36343705
chr1 235158636 235158643 NFATC2 JASPAR yes 118487467
chr1 235158661 235158675 EBF1 JASPAR yes 36343706
chr1 235158661 235158675 EBF1 JASPAR yes 118487468
chr1 235158668 235158673 TFAP2A TRANSFAC yes 36343707
chr1 235158668 235158673 TFAP2A TRANSFAC yes 118487469
chr1 235158668 235158674 MZF1 JASPAR yes 36343708
chr1 235158668 235158674 MZF1 JASPAR yes 118487470
chr1 235158705 235158713 MEIS2 JASPAR yes 36343709
chr1 235158705 235158713 MEIS3 JASPAR yes 36343710
chr1 235158705 235158713 MEIS2 JASPAR yes 118487471
chr1 235158705 235158713 MEIS3 JASPAR yes 118487472
chr1 235158706 235158710 NFE TRANSFAC yes 36343711
chr1 235158706 235158710 NFE TRANSFAC yes 118487473
chr1 235158738 235158756 NFYA JASPAR yes 36343712
chr1 235158738 235158756 NFYA JASPAR yes 118487474
SNP sites on vista5689[chr1:235158479-235158766]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 235158552 rs76140342 C T no 1049093
chr1 235158553 rs141914892 G A no 1049094
chr1 235158557 rs146306885 A C no 1049095
chr1 235158613 rs142208463 G A no 1049096
chr1 235158640 rs529181885 A G
MTF1 NFATC2 NFATC3
1049097
chr1 235158706 rs183606896 C A
MEIS2 MEIS3 NFE
1049098
chr1 235158723 rs558202585 T A no 1049099
chr1 235158759 rs369060780 G C no 1049100
chr1 235158765 rs373791240 G A no 1049101
Genes possibly regulated by vista5689[chr1:235158479-235158766]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5689[chr1:235158479-235158766]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results