EnhancerDB
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  3. vista5693[chr1:235242252-235242564]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5693[chr1:235242252-235242564]
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Tissue distribution of vista5693
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Transcription factor that possibly regulate vista5693[chr1:235242252-235242564]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 235242267 235242270 MYB TRANSFAC yes 36348783
chr1 235242267 235242270 MYB TRANSFAC yes 118487623
chr1 235242284 235242289 USF2 TRANSFAC yes 36348784
chr1 235242284 235242289 USF2 TRANSFAC yes 118487624
chr1 235242296 235242304 TBX5 JASPAR yes 36348785
chr1 235242296 235242304 TBX5 JASPAR yes 118487625
chr1 235242296 235242305 ZEB1 JASPAR yes 36348786
chr1 235242296 235242305 ZEB1 JASPAR yes 118487626
chr1 235242296 235242311 SCRT1 JASPAR yes 36348787
chr1 235242296 235242311 SCRT1 JASPAR yes 118487627
chr1 235242297 235242307 FIGLA JASPAR yes 36348788
chr1 235242297 235242307 ID4 JASPAR yes 36348789
chr1 235242297 235242307 TCF3 JASPAR yes 36348790
chr1 235242297 235242307 TCF4 JASPAR yes 36348791
chr1 235242297 235242307 FIGLA JASPAR yes 118487628
chr1 235242297 235242307 ID4 JASPAR yes 118487629
chr1 235242297 235242307 TCF3 JASPAR yes 118487630
chr1 235242297 235242307 TCF4 JASPAR yes 118487631
chr1 235242298 235242307 SNAI2 JASPAR yes 36348792
chr1 235242298 235242307 SNAI2 JASPAR yes 118487632
chr1 235242298 235242311 SCRT2 JASPAR yes 36348793
chr1 235242298 235242311 SCRT2 JASPAR yes 118487633
chr1 235242299 235242304 USF2 TRANSFAC yes 36348794
chr1 235242299 235242304 USF2 TRANSFAC yes 118487634
chr1 235242304 235242322 ESR2 JASPAR yes 36348795
chr1 235242304 235242322 ESR2 JASPAR yes 118487635
chr1 235242364 235242374 HOXB13 JASPAR yes 36348796
chr1 235242364 235242374 HOXB13 JASPAR yes 118487636
chr1 235242368 235242372 YY1 TRANSFAC yes 36348797
chr1 235242368 235242372 YY1 TRANSFAC yes 118487637
chr1 235242385 235242399 XBP1 JASPAR yes 36348798
chr1 235242385 235242399 XBP1 JASPAR yes 118487638
chr1 235242387 235242392 ATF1 TRANSFAC yes 36348799
chr1 235242387 235242392 ATF1 TRANSFAC yes 118487639
chr1 235242403 235242407 YY1 TRANSFAC yes 36348800
chr1 235242403 235242407 YY1 TRANSFAC yes 118487640
chr1 235242427 235242448 IRF1 JASPAR yes 36348801
chr1 235242427 235242448 IRF1 JASPAR yes 118487641
chr1 235242432 235242453 IRF1 JASPAR yes 36348802
chr1 235242432 235242453 IRF1 JASPAR yes 118487642
chr1 235242435 235242449 IRF7 JASPAR yes 36348803
chr1 235242435 235242449 IRF7 JASPAR yes 118487643
chr1 235242436 235242450 STAT1 JASPAR yes 36348804
chr1 235242436 235242450 STAT1 JASPAR yes 118487644
chr1 235242436 235242451 PRDM1 JASPAR yes 36348805
chr1 235242436 235242451 STAT2 JASPAR yes 36348806
chr1 235242436 235242451 PRDM1 JASPAR yes 118487645
chr1 235242436 235242451 STAT2 JASPAR yes 118487646
chr1 235242436 235242454 IRF2 JASPAR yes 36348807
chr1 235242436 235242454 IRF2 JASPAR yes 118487647
chr1 235242437 235242452 SOX21 JASPAR yes 36348808
chr1 235242437 235242452 SOX21 JASPAR yes 118487648
chr1 235242440 235242445 ETS2 TRANSFAC yes 36348809
chr1 235242440 235242445 ETS2 TRANSFAC yes 118487649
chr1 235242460 235242464 YY1 TRANSFAC yes 36348810
chr1 235242460 235242464 YY1 TRANSFAC yes 118487650
chr1 235242488 235242503 ESR2 JASPAR yes 36348811
chr1 235242488 235242503 ESR2 JASPAR yes 118487651
chr1 235242488 235242508 ESR1 JASPAR yes 36348812
chr1 235242488 235242508 ESR1 JASPAR yes 118487652
chr1 235242491 235242505 JUN JASPAR yes 36348813
chr1 235242491 235242505 JUN JASPAR yes 118487653
chr1 235242494 235242505 JUNB JASPAR yes 36348814
chr1 235242494 235242505 JUNB JASPAR yes 118487654
chr1 235242495 235242506 FOSL1 JASPAR yes 36348815
chr1 235242495 235242506 FOSL1 JASPAR yes 118487655
chr1 235242496 235242503 JUN TRANSFAC yes 36348816
chr1 235242496 235242503 JUN TRANSFAC yes 118487656
chr1 235242505 235242523 MAFF JASPAR yes 36348817
chr1 235242505 235242523 MAFF JASPAR yes 118487657
chr1 235242530 235242551 REST JASPAR yes 36348818
chr1 235242530 235242551 REST JASPAR yes 118487658
chr1 235242538 235242553 HNF4G JASPAR yes 36348819
chr1 235242538 235242553 NR2C2 JASPAR yes 36348820
chr1 235242538 235242553 HNF4G JASPAR yes 118487659
chr1 235242538 235242553 NR2C2 JASPAR yes 118487660
chr1 235242539 235242554 HNF4A JASPAR yes 36348821
chr1 235242539 235242554 HNF4A JASPAR yes 118487661
chr1 235242541 235242545 LFA1 TRANSFAC yes 36348822
chr1 235242541 235242545 LFA1 TRANSFAC yes 118487662
chr1 235242550 235242564 RORA JASPAR yes 36348823
chr1 235242550 235242564 RORA JASPAR yes 118487663
chr1 235242556 235242562 ESR1 TRANSFAC yes 36348824
chr1 235242556 235242562 ESR1 TRANSFAC yes 118487664
chr1 235242558 235242562 ESR1 TRANSFAC yes 36348825
chr1 235242558 235242562 ESR1 TRANSFAC yes 118487665
chr1 235242561 235242566 MYC TRANSFAC yes 36348826
chr1 235242561 235242566 MYC TRANSFAC yes 118487666
SNP sites on vista5693[chr1:235242252-235242564]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista5693[chr1:235242252-235242564]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235272651 235292251 - TOMM20 ENSG00000173726.6 235292251 0.64 1.0 1965 50313
chr1 235294498 235324772 - RBM34 ENSG00000188739.10 235324772 0.86 0.79 1966 17792
Expression level of Genes
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miRNAs possibly regulated by vista5693[chr1:235242252-235242564]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results