EnhancerDB
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  3. vista5696[chr1:235246558-235246857]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5696[chr1:235246558-235246857]
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Tissue distribution of vista5696
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Transcription factor that possibly regulate vista5696[chr1:235246558-235246857]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 235246749 235246929 SPI1 UCSC Txn Factor no Conserved 107885880
chr1 235246546 235246561 PRDM1 JASPAR yes 36349658
chr1 235246546 235246561 PRDM1 JASPAR yes 118487847
chr1 235246551 235246564 SMAD2 JASPAR yes 36349659
chr1 235246551 235246564 SMAD2 JASPAR yes 118487848
chr1 235246618 235246628 SP1 JASPAR yes 36349660
chr1 235246618 235246628 SP1 JASPAR yes 118487849
chr1 235246631 235246645 RXRB JASPAR yes 36349661
chr1 235246631 235246645 RXRG JASPAR yes 36349662
chr1 235246631 235246645 RXRB JASPAR yes 118487850
chr1 235246631 235246645 RXRG JASPAR yes 118487851
chr1 235246631 235246646 NR2C2 JASPAR yes 36349663
chr1 235246631 235246646 NR2C2 JASPAR yes 118487852
chr1 235246634 235246647 NR2F1 JASPAR yes 36349664
chr1 235246634 235246647 NR2F1 JASPAR yes 118487853
chr1 235246667 235246677 NHLH1 JASPAR yes 36349665
chr1 235246667 235246677 NHLH1 JASPAR yes 118487854
chr1 235246674 235246679 ETS2 TRANSFAC yes 36349666
chr1 235246674 235246679 ETS2 TRANSFAC yes 118487855
chr1 235246677 235246692 MEF2C JASPAR yes 36349667
chr1 235246677 235246692 MEF2C JASPAR yes 118487856
chr1 235246694 235246698 YY1 TRANSFAC yes 36349668
chr1 235246694 235246698 YY1 TRANSFAC yes 118487857
chr1 235246712 235246722 NFIA JASPAR yes 36349669
chr1 235246712 235246722 NFIA JASPAR yes 118487858
chr1 235246714 235246720 NFIC JASPAR yes 36349670
chr1 235246714 235246720 NFIC JASPAR yes 118487859
chr1 235246724 235246729 SP1 TRANSFAC yes 36349671
chr1 235246724 235246729 SP1 TRANSFAC yes 118487860
chr1 235246738 235246749 ELK4 JASPAR yes 36349672
chr1 235246738 235246749 FLI1 JASPAR yes 36349673
chr1 235246738 235246749 ELK4 JASPAR yes 118487861
chr1 235246738 235246749 FLI1 JASPAR yes 118487862
chr1 235246739 235246743 YY1 TRANSFAC yes 36349674
chr1 235246739 235246743 YY1 TRANSFAC yes 118487863
chr1 235246739 235246752 ELF1 JASPAR yes 36349675
chr1 235246739 235246752 ELF1 JASPAR yes 118487864
chr1 235246740 235246748 FEV JASPAR yes 36349676
chr1 235246740 235246748 FEV JASPAR yes 118487865
chr1 235246757 235246767 TEAD1 JASPAR yes 36349677
chr1 235246757 235246767 TEAD4 JASPAR yes 36349678
chr1 235246757 235246767 TEAD1 JASPAR yes 118487866
chr1 235246757 235246767 TEAD4 JASPAR yes 118487867
chr1 235246757 235246769 TEAD1 JASPAR yes 36349679
chr1 235246757 235246769 TEAD1 JASPAR yes 118487868
chr1 235246758 235246766 TEAD3 JASPAR yes 36349680
chr1 235246758 235246766 TEAD3 JASPAR yes 118487869
chr1 235246761 235246766 ETS2 TRANSFAC yes 36349681
chr1 235246761 235246766 ETS2 TRANSFAC yes 118487870
chr1 235246766 235246783 BCL6B JASPAR yes 36349682
chr1 235246766 235246783 BCL6B JASPAR yes 118487871
chr1 235246797 235246801 YY1 TRANSFAC yes 36349683
chr1 235246797 235246801 YY1 TRANSFAC yes 118487872
chr1 235246810 235246821 STAT3 JASPAR yes 36349684
chr1 235246810 235246821 STAT3 JASPAR yes 118487873
chr1 235246814 235246825 FOXP2 JASPAR yes 36349685
chr1 235246814 235246825 FOXP2 JASPAR yes 118487874
chr1 235246823 235246834 USF1 JASPAR yes 36349686
chr1 235246823 235246834 USF1 JASPAR yes 118487875
chr1 235246824 235246834 TFE3 JASPAR yes 36349687
chr1 235246824 235246834 TFEB JASPAR yes 36349688
chr1 235246824 235246834 TFEC JASPAR yes 36349689
chr1 235246824 235246834 TFE3 JASPAR yes 118487876
chr1 235246824 235246834 TFEB JASPAR yes 118487877
chr1 235246824 235246834 TFEC JASPAR yes 118487878
chr1 235246824 235246835 USF1 JASPAR yes 36349690
chr1 235246824 235246835 USF2 JASPAR yes 36349691
chr1 235246824 235246835 USF1 JASPAR yes 118487879
chr1 235246824 235246835 USF2 JASPAR yes 118487880
chr1 235246846 235246867 IRF1 JASPAR yes 36349692
chr1 235246846 235246867 IRF1 JASPAR yes 118487881
chr1 235246849 235246863 SPI1 JASPAR yes 36349693
chr1 235246849 235246863 SPI1 JASPAR yes 118487882
chr1 235246851 235246869 IRF2 JASPAR yes 36349694
chr1 235246851 235246869 IRF2 JASPAR yes 118487883
chr1 235246852 235246873 IRF1 JASPAR yes 36349695
chr1 235246852 235246873 IRF1 JASPAR yes 118487884
chr1 235246854 235246869 PRDM1 JASPAR yes 36349696
chr1 235246854 235246869 PRDM1 JASPAR yes 118487885
chr1 235246855 235246869 SPIC JASPAR yes 36349697
chr1 235246855 235246869 SPIC JASPAR yes 118487886
SNP sites on vista5696[chr1:235246558-235246857]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 235246608 rs555881491 C T no 1049621
chr1 235246650 rs74984228 G A no 1049622
Genes possibly regulated by vista5696[chr1:235246558-235246857]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235272651 235292251 - TOMM20 ENSG00000173726.6 235292251 0.64 1.0 1965 54606
chr1 235294498 235324772 - RBM34 ENSG00000188739.10 235324772 0.86 0.79 1966 22085
Expression level of Genes
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miRNAs possibly regulated by vista5696[chr1:235246558-235246857]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results