EnhancerDB
  1. Home
  2. Enhancers
  3. vista5698[chr1:235390754-235391125]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5698[chr1:235390754-235391125]
Back to top
Tissue distribution of vista5698
Back to top
Transcription factor that possibly regulate vista5698[chr1:235390754-235391125]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 235390763 235390767 TEAD2 TRANSFAC yes 118487899
chr1 235390765 235390768 MYB TRANSFAC yes 118487900
chr1 235390772 235390781 SRY JASPAR yes 118487901
chr1 235390783 235390787 YY1 TRANSFAC yes 118487902
chr1 235390786 235390802 POU4F3 JASPAR yes 118487903
chr1 235390788 235390792 YY1 TRANSFAC yes 118487904
chr1 235390789 235390802 HNF1B JASPAR yes 118487905
chr1 235390803 235390817 TCF7L2 JASPAR yes 118487906
chr1 235390818 235390829 CEBPB JASPAR yes 118487907
chr1 235390819 235390830 CEBPA JASPAR yes 118487908
chr1 235390825 235390828 MYB TRANSFAC yes 118487909
chr1 235390840 235390852 HNF1B JASPAR yes 118487910
chr1 235390851 235390860 VENTX JASPAR yes 118487911
chr1 235390851 235390861 ESX1 JASPAR yes 118487912
chr1 235390851 235390861 GBX1 JASPAR yes 118487913
chr1 235390851 235390861 GBX2 JASPAR yes 118487914
chr1 235390851 235390861 GSX1 JASPAR yes 118487915
chr1 235390851 235390861 GSX2 JASPAR yes 118487916
chr1 235390851 235390861 HESX1 JASPAR yes 118487917
chr1 235390851 235390861 LBX2 JASPAR yes 118487918
chr1 235390851 235390861 LHX2 JASPAR yes 118487919
chr1 235390851 235390861 MNX1 JASPAR yes 118487920
chr1 235390851 235390861 RAX JASPAR yes 118487921
chr1 235390852 235390856 H1TF2 TRANSFAC yes 118487922
chr1 235390852 235390856 NFE TRANSFAC yes 118487923
chr1 235390852 235390856 SRF TRANSFAC yes 118487924
chr1 235390852 235390860 BARX1 JASPAR yes 118487925
chr1 235390852 235390860 BSX JASPAR yes 118487926
chr1 235390852 235390860 DLX6 JASPAR yes 118487927
chr1 235390852 235390860 ISX JASPAR yes 118487928
chr1 235390852 235390860 LBX1 JASPAR yes 118487929
chr1 235390852 235390860 LHX9 JASPAR yes 118487930
chr1 235390852 235390860 MSX1 JASPAR yes 118487931
chr1 235390852 235390860 MSX2 JASPAR yes 118487932
chr1 235390852 235390860 NKX6-2 JASPAR yes 118487933
chr1 235390852 235390860 PRRX1 JASPAR yes 118487934
chr1 235390852 235390860 RAX2 JASPAR yes 118487935
chr1 235390852 235390860 SHOX JASPAR yes 118487936
chr1 235390852 235390860 UNCX JASPAR yes 118487937
chr1 235390853 235390863 PAX3 JASPAR yes 118487938
chr1 235390853 235390864 PHOX2A JASPAR yes 118487939
chr1 235390853 235390864 PROP1 JASPAR yes 118487940
chr1 235390865 235390876 PROP1 JASPAR yes 118487941
chr1 235390866 235390872 HiNF-A TRANSFAC yes 118487942
chr1 235390871 235390875 YY1 TRANSFAC yes 118487943
chr1 235390880 235390884 YY1 TRANSFAC yes 118487944
chr1 235390885 235390889 YY1 TRANSFAC yes 118487945
chr1 235390890 235390908 SRF JASPAR yes 118487946
chr1 235390892 235390907 MEF2C JASPAR yes 118487947
chr1 235390893 235390897 ESR1 TRANSFAC yes 118487948
chr1 235390893 235390908 MEF2A JASPAR yes 118487949
chr1 235390914 235390918 NFE TRANSFAC yes 118487950
chr1 235390914 235390919 GATA1 TRANSFAC yes 118487951
chr1 235390914 235390920 GATA3 JASPAR yes 118487952
chr1 235390921 235390936 HNF1A JASPAR yes 118487953
chr1 235390922 235390935 HNF1B JASPAR yes 118487954
chr1 235390924 235390934 POU6F2 JASPAR yes 118487955
chr1 235390925 235390935 GSX1 JASPAR yes 118487956
chr1 235390925 235390935 GSX2 JASPAR yes 118487957
chr1 235390925 235390935 HOXA2 JASPAR yes 118487958
chr1 235390925 235390935 HOXB2 JASPAR yes 118487959
chr1 235390925 235390935 HOXB3 JASPAR yes 118487960
chr1 235390925 235390935 LHX2 JASPAR yes 118487961
chr1 235390925 235390935 MEOX1 JASPAR yes 118487962
chr1 235390925 235390935 MEOX2 JASPAR yes 118487963
chr1 235390925 235390935 NOTO JASPAR yes 118487964
chr1 235390926 235390934 NKX6-1 JASPAR yes 118487965
chr1 235390926 235390934 NKX6-2 JASPAR yes 118487966
chr1 235390928 235390932 YY1 TRANSFAC yes 118487967
chr1 235390931 235390934 MYB TRANSFAC yes 118487968
chr1 235390934 235390944 HOXC10 JASPAR yes 118487969
chr1 235390934 235390944 HOXD11 JASPAR yes 118487970
chr1 235390934 235390945 HOXC11 JASPAR yes 118487971
chr1 235390934 235390945 HOXC12 JASPAR yes 118487972
chr1 235390934 235390945 HOXC13 JASPAR yes 118487973
chr1 235390934 235390945 HOXD12 JASPAR yes 118487974
chr1 235390955 235390964 VENTX JASPAR yes 118487975
chr1 235390958 235390962 YY1 TRANSFAC yes 118487976
chr1 235390958 235390973 HNF1A JASPAR yes 118487977
chr1 235391031 235391041 OLIG2 JASPAR yes 118487978
chr1 235391031 235391041 OLIG3 JASPAR yes 118487979
chr1 235391035 235391039 YY1 TRANSFAC yes 118487980
chr1 235391036 235391046 HOXA13 JASPAR yes 118487981
chr1 235391036 235391046 HOXB13 JASPAR yes 118487982
chr1 235391036 235391046 HOXD13 JASPAR yes 118487983
chr1 235391036 235391047 HOXA10 JASPAR yes 118487984
chr1 235391037 235391046 CDX1 JASPAR yes 118487985
chr1 235391037 235391048 CDX2 JASPAR yes 118487986
chr1 235391047 235391051 YY1 TRANSFAC yes 118487987
chr1 235391047 235391057 HOXC10 JASPAR yes 118487988
chr1 235391047 235391057 HOXD11 JASPAR yes 118487989
chr1 235391047 235391058 HOXC11 JASPAR yes 118487990
chr1 235391047 235391058 HOXC12 JASPAR yes 118487991
chr1 235391047 235391058 HOXD12 JASPAR yes 118487992
chr1 235391048 235391063 JUND JASPAR yes 118487993
chr1 235391049 235391062 JUN JASPAR yes 118487994
chr1 235391052 235391065 DUXA JASPAR yes 118487995
chr1 235391053 235391064 DUX4 JASPAR yes 118487996
chr1 235391053 235391064 PHOX2A JASPAR yes 118487997
chr1 235391053 235391071 NFYA JASPAR yes 118487998
chr1 235391067 235391071 NFE TRANSFAC yes 118487999
chr1 235391067 235391072 GATA1 TRANSFAC yes 118488000
chr1 235391067 235391073 GATA3 JASPAR yes 118488001
chr1 235391076 235391080 YY1 TRANSFAC yes 118488002
chr1 235391086 235391094 GATA3 JASPAR yes 118488003
chr1 235391109 235391115 JUN TRANSFAC yes 118488004
SNP sites on vista5698[chr1:235390754-235391125]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 235390903 rs75536695 T C
MEF2A MEF2C SRF
1050021
Genes possibly regulated by vista5698[chr1:235390754-235391125]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235272651 235292251 - TOMM20 ENSG00000173726.6 235292251 0.64 1.0 1965 1497
chr1 235294498 235324772 - RBM34 ENSG00000188739.10 235324772 0.86 0.79 1966 34018
chr1 235490665 235507847 + GGPS1 ENSG00000152904.7 235490665 0.68 0.99 1968 460
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5698[chr1:235390754-235391125]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 235353355 235353376 - hsa-miR-4753-3p MIMAT0019891 235491482 0.0033931119826751694 0.883879 0.0 133
Expression level of miRNAs
Back to top