EnhancerDB
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  3. vista5703[chr1:235486836-235487237]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5703[chr1:235486836-235487237]
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Tissue distribution of vista5703
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Transcription factor that possibly regulate vista5703[chr1:235486836-235487237]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 235486842 235486863 LUN1 TRANSFAC yes 118488269
chr1 235486859 235486873 PLAG1 JASPAR yes 118488270
chr1 235486866 235486871 SP1 TRANSFAC yes 118488271
chr1 235486867 235486872 SP1 TRANSFAC yes 118488272
chr1 235486867 235486876 THAP1 JASPAR yes 118488273
chr1 235486870 235486874 LFA1 TRANSFAC yes 118488274
chr1 235486875 235486886 USF1 JASPAR yes 118488275
chr1 235486875 235486886 USF2 JASPAR yes 118488276
chr1 235486876 235486886 SREBF2 JASPAR yes 118488277
chr1 235486878 235486883 USF2 TRANSFAC yes 118488278
chr1 235486881 235486894 NR2F1 JASPAR yes 118488279
chr1 235486882 235486890 CREB1 JASPAR yes 118488280
chr1 235486883 235486901 RARA JASPAR yes 118488281
chr1 235486885 235486889 ESR1 TRANSFAC yes 118488282
chr1 235486893 235486913 ESR1 JASPAR yes 118488283
chr1 235486897 235486915 NR3C1 JASPAR yes 118488284
chr1 235486910 235486914 H1TF2 TRANSFAC yes 118488285
chr1 235486910 235486914 NFE TRANSFAC yes 118488286
chr1 235486910 235486914 SRF TRANSFAC yes 118488287
chr1 235486955 235486975 TP63 JASPAR yes 118488288
chr1 235486956 235486974 TP53 JASPAR yes 118488289
chr1 235486956 235486974 TP63 JASPAR yes 118488290
chr1 235486956 235486974 TP73 JASPAR yes 118488291
chr1 235486958 235486973 TP53 JASPAR yes 118488292
chr1 235486974 235486978 TEAD2 TRANSFAC yes 118488293
chr1 235486984 235486996 HNF1B JASPAR yes 118488294
chr1 235487031 235487048 ESR1 JASPAR yes 118488295
chr1 235487073 235487077 LFA1 TRANSFAC yes 118488296
chr1 235487095 235487116 IRF1 JASPAR yes 118488297
chr1 235487096 235487111 FOXP1 JASPAR yes 118488298
chr1 235487098 235487104 TBP TRANSFAC yes 118488299
chr1 235487099 235487114 PRDM1 JASPAR yes 118488300
chr1 235487099 235487114 STAT2 JASPAR yes 118488301
chr1 235487101 235487122 IRF1 JASPAR yes 118488302
chr1 235487104 235487118 IRF7 JASPAR yes 118488303
chr1 235487105 235487120 PRDM1 JASPAR yes 118488304
chr1 235487106 235487118 IRF1 JASPAR yes 118488305
chr1 235487109 235487129 ESR1 JASPAR yes 118488306
chr1 235487113 235487131 ESR2 JASPAR yes 118488307
chr1 235487121 235487133 HLF JASPAR yes 118488308
chr1 235487126 235487137 HOXA10 JASPAR yes 118488309
chr1 235487127 235487136 CDX1 JASPAR yes 118488310
chr1 235487127 235487137 HOXA13 JASPAR yes 118488311
chr1 235487127 235487137 HOXB13 JASPAR yes 118488312
chr1 235487127 235487137 HOXD13 JASPAR yes 118488313
chr1 235487127 235487142 MEF2C JASPAR yes 118488314
chr1 235487128 235487143 MEF2A JASPAR yes 118488315
chr1 235487129 235487141 MEF2A JASPAR yes 118488316
chr1 235487130 235487140 MEF2A JASPAR yes 118488317
chr1 235487148 235487160 FOXC2 JASPAR yes 118488318
chr1 235487149 235487160 FOXB1 JASPAR yes 118488319
chr1 235487149 235487160 FOXC1 JASPAR yes 118488320
chr1 235487150 235487154 YY1 TRANSFAC yes 118488321
chr1 235487179 235487191 SRF JASPAR yes 118488322
chr1 235487182 235487186 TEAD2 TRANSFAC yes 118488323
chr1 235487189 235487207 MAFF JASPAR yes 118488324
chr1 235487191 235487202 NRL JASPAR yes 118488325
chr1 235487191 235487206 MAFK JASPAR yes 118488326
chr1 235487200 235487214 IRF7 JASPAR yes 118488327
chr1 235487205 235487209 YY1 TRANSFAC yes 118488328
chr1 235487210 235487214 YY1 TRANSFAC yes 118488329
chr1 235487212 235487224 FOXI1 JASPAR yes 118488330
chr1 235487212 235487227 FOXP1 JASPAR yes 118488331
chr1 235487215 235487219 YY1 TRANSFAC yes 118488332
chr1 235487216 235487237 IRF1 JASPAR yes 118488333
chr1 235487218 235487233 STAT2 JASPAR yes 118488334
chr1 235487221 235487236 FOXP1 JASPAR yes 118488335
chr1 235487222 235487237 FOXP1 JASPAR yes 118488336
SNP sites on vista5703[chr1:235486836-235487237]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 235486856 rs137895070 T C,G
LUN1
1050875
chr1 235487036 rs545446120 T C
ESR1
1050876
chr1 235487080 rs542763006 C T no 1050877
chr1 235487083 rs111902062 G C no 1050878
chr1 235487094 rs12753233 C T no 1050879
chr1 235487235 rs201664541 TGA T
FOXP1 IRF1
1050880
chr1 235487235 rs369857721 TGA T
FOXP1 IRF1
1050881
Genes possibly regulated by vista5703[chr1:235486836-235487237]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235294949 235491534 - ARID4B ENSG00000054267.16 235491534 0.68 0.99 1967 95703
chr1 235490665 235507847 + GGPS1 ENSG00000152904.7 235490665 0.68 0.99 1968 96572
chr1 235530675 235612283 + TBCE ENSG00000116957.8 235530675 0.67 0.99 1969 56562
Expression level of Genes
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miRNAs possibly regulated by vista5703[chr1:235486836-235487237]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 235353355 235353376 - hsa-miR-4753-3p MIMAT0019891 235491482 0.08280565026790063 0.883879 0.0 133
Expression level of miRNAs
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