EnhancerDB
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  3. vista5706[chr1:235668656-235669018]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5706[chr1:235668656-235669018]
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Tissue distribution of vista5706
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Transcription factor that possibly regulate vista5706[chr1:235668656-235669018]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 235666911 235668883 POLR2A UCSC Txn Factor no Conserved 107886005
chr1 235667480 235668668 MAX UCSC Txn Factor no Conserved 107886006
chr1 235667929 235668777 PHF8 UCSC Txn Factor no Conserved 107886010
chr1 235668676 235668681 SP1 TRANSFAC yes 118488408
chr1 235668676 235668697 IRF1 JASPAR yes 118488409
chr1 235668678 235668693 STAT2 JASPAR yes 118488410
chr1 235668679 235668693 STAT1 JASPAR yes 118488411
chr1 235668682 235668703 IRF1 JASPAR yes 118488412
chr1 235668683 235668689 TCF4 TRANSFAC yes 118488413
chr1 235668683 235668704 IRF1 JASPAR yes 118488414
chr1 235668688 235668706 IRF2 JASPAR yes 118488415
chr1 235668689 235668710 IRF1 JASPAR yes 118488416
chr1 235668693 235668705 IRF1 JASPAR yes 118488417
chr1 235668693 235668707 IRF7 JASPAR yes 118488418
chr1 235668695 235668701 TCF4 TRANSFAC yes 118488419
chr1 235668721 235668725 NFE TRANSFAC yes 118488420
chr1 235668755 235668772 ESR1 JASPAR yes 118488421
chr1 235668765 235668777 HINFP JASPAR yes 118488422
chr1 235668769 235668777 SP1 TRANSFAC yes 118488423
chr1 235668769 235668779 SP1 JASPAR yes 118488424
chr1 235668860 235668864 YY1 TRANSFAC yes 118488425
chr1 235668880 235668892 HLF JASPAR yes 118488426
chr1 235668882 235668893 YY2 JASPAR yes 118488427
chr1 235668883 235668895 YY1 JASPAR yes 118488428
chr1 235668912 235668925 NR2F1 JASPAR yes 118488429
chr1 235668916 235668924 CREB1 JASPAR yes 118488430
chr1 235668920 235668930 SREBF2 JASPAR yes 118488431
chr1 235668920 235668931 USF1 JASPAR yes 118488432
chr1 235668920 235668931 USF2 JASPAR yes 118488433
chr1 235668930 235668935 SP1 TRANSFAC yes 118488434
chr1 235668933 235668947 PLAG1 JASPAR yes 118488435
chr1 235668941 235668955 GLIS3 JASPAR yes 118488436
chr1 235668969 235668980 FOSL2 JASPAR yes 118488437
chr1 235668987 235669008 IRF1 JASPAR yes 118488438
chr1 235668988 235669009 IRF1 JASPAR yes 118488439
chr1 235668989 235669004 STAT2 JASPAR yes 118488440
chr1 235668990 235669011 IRF1 JASPAR yes 118488441
chr1 235668991 235669012 IRF1 JASPAR yes 118488442
chr1 235668992 235669007 FOXP1 JASPAR yes 118488443
chr1 235668992 235669013 IRF1 JASPAR yes 118488444
chr1 235668993 235669008 FOXP1 JASPAR yes 118488445
chr1 235668993 235669014 IRF1 JASPAR yes 118488446
chr1 235668994 235669009 FOXP1 JASPAR yes 118488447
chr1 235668994 235669015 IRF1 JASPAR yes 118488448
chr1 235668995 235669010 FOXP1 JASPAR yes 118488449
chr1 235668995 235669016 IRF1 JASPAR yes 118488450
chr1 235668996 235669011 FOXP1 JASPAR yes 118488451
chr1 235668997 235669012 FOXP1 JASPAR yes 118488452
chr1 235668998 235669013 FOXP1 JASPAR yes 118488453
chr1 235668999 235669014 FOXP1 JASPAR yes 118488454
chr1 235669000 235669015 FOXP1 JASPAR yes 118488455
chr1 235669001 235669016 FOXP1 JASPAR yes 118488456
chr1 235669002 235669017 FOXP1 JASPAR yes 118488457
chr1 235669003 235669018 FOXP1 JASPAR yes 118488458
SNP sites on vista5706[chr1:235668656-235669018]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 235668718 rs113436277 C T
PHF8 POLR2A
1051396
chr1 235668721 rs143133323 T G
NFE PHF8 POLR2A
1051397
chr1 235668993 rs587671400 GTTT G
FOXP1 IRF1 STAT2
1051398
Genes possibly regulated by vista5706[chr1:235668656-235669018]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235613238 235667781 - B3GALNT2 ENSG00000162885.8 235667781 0.7 1.0 1970 99125
Expression level of Genes
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miRNAs possibly regulated by vista5706[chr1:235668656-235669018]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results