EnhancerDB
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  3. vista5716[chr1:236022682-236022818]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5716[chr1:236022682-236022818]
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Tissue distribution of vista5716
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Transcription factor that possibly regulate vista5716[chr1:236022682-236022818]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236022680 236022690 ETV6 JASPAR yes 36381707
chr1 236022680 236022690 ETV6 JASPAR yes 118489176
chr1 236022681 236022688 SPI1 JASPAR yes 36381708
chr1 236022681 236022688 SPI1 JASPAR yes 118489177
chr1 236022681 236022689 EHF JASPAR yes 36381709
chr1 236022681 236022689 EHF JASPAR yes 118489178
chr1 236022703 236022706 MYB TRANSFAC yes 36381710
chr1 236022703 236022706 MYB TRANSFAC yes 118489179
chr1 236022714 236022718 YY1 TRANSFAC yes 36381711
chr1 236022714 236022718 YY1 TRANSFAC yes 118489180
chr1 236022726 236022730 YY1 TRANSFAC yes 36381712
chr1 236022726 236022730 YY1 TRANSFAC yes 118489181
chr1 236022736 236022751 FOXA1 JASPAR yes 36381713
chr1 236022736 236022751 FOXA1 JASPAR yes 118489182
chr1 236022738 236022750 FOXC2 JASPAR yes 36381714
chr1 236022738 236022750 FOXC2 JASPAR yes 118489183
chr1 236022739 236022750 FOXB1 JASPAR yes 36381715
chr1 236022739 236022750 FOXC1 JASPAR yes 36381716
chr1 236022739 236022750 FOXB1 JASPAR yes 118489184
chr1 236022739 236022750 FOXC1 JASPAR yes 118489185
chr1 236022740 236022744 YY1 TRANSFAC yes 36381717
chr1 236022740 236022744 YY1 TRANSFAC yes 118489186
chr1 236022750 236022766 SOX8 JASPAR yes 36381718
chr1 236022750 236022766 SOX8 JASPAR yes 118489187
chr1 236022752 236022765 POU2F2 JASPAR yes 36381719
chr1 236022752 236022765 POU2F2 JASPAR yes 118489188
chr1 236022760 236022769 SRY JASPAR yes 36381720
chr1 236022760 236022769 SRY JASPAR yes 118489189
chr1 236022763 236022773 HOXA13 JASPAR yes 36381721
chr1 236022763 236022773 HOXB13 JASPAR yes 36381722
chr1 236022763 236022773 HOXD13 JASPAR yes 36381723
chr1 236022763 236022773 HOXA13 JASPAR yes 118489190
chr1 236022763 236022773 HOXB13 JASPAR yes 118489191
chr1 236022763 236022773 HOXD13 JASPAR yes 118489192
chr1 236022763 236022774 HOXA10 JASPAR yes 36381724
chr1 236022763 236022774 HOXA10 JASPAR yes 118489193
chr1 236022764 236022773 CDX1 JASPAR yes 36381725
chr1 236022764 236022773 CDX1 JASPAR yes 118489194
chr1 236022800 236022815 FOXP1 JASPAR yes 36381726
chr1 236022800 236022815 FOXP1 JASPAR yes 118489195
chr1 236022801 236022816 FOXP1 JASPAR yes 36381727
chr1 236022801 236022816 FOXP1 JASPAR yes 118489196
chr1 236022802 236022817 FOXP1 JASPAR yes 36381728
chr1 236022802 236022817 FOXP1 JASPAR yes 118489197
chr1 236022803 236022818 FOXP1 JASPAR yes 36381729
chr1 236022803 236022818 FOXP1 JASPAR yes 118489198
chr1 236022816 236022827 DMRT3 JASPAR yes 36381730
chr1 236022816 236022827 DMRT3 JASPAR yes 118489199
SNP sites on vista5716[chr1:236022682-236022818]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236022773 rs149305367 G T
CDX1 HOXA10 HOXA13 HOXB13 HOXD13
1052577
chr1 236022802 rs34646468 C CT
FOXP1
1052578
chr1 236022802 rs386370050 C CT
FOXP1
1052579
chr1 236022802 rs577611523 C CT
FOXP1
1052580
chr1 236022815 rs59011777 T TA,TT
FOXP1
1052581
Genes possibly regulated by vista5716[chr1:236022682-236022818]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235824341 236046940 - LYST ENSG00000143669.9 236046940 0.86 1.0 1972 75878
Expression level of Genes
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miRNAs possibly regulated by vista5716[chr1:236022682-236022818]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results