EnhancerDB
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  3. vista572[chr1:17887951-17888293]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista572[chr1:17887951-17888293]
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Tissue distribution of vista572
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Transcription factor that possibly regulate vista572[chr1:17887951-17888293]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 17887958 17887962 H1TF2 TRANSFAC yes 27101968
chr1 17887958 17887962 NFE TRANSFAC yes 27101969
chr1 17887958 17887962 SRF TRANSFAC yes 27101970
chr1 17887958 17887962 H1TF2 TRANSFAC yes 118241342
chr1 17887958 17887962 NFE TRANSFAC yes 118241343
chr1 17887958 17887962 SRF TRANSFAC yes 118241344
chr1 17887963 17887982 REST JASPAR yes 27101971
chr1 17887963 17887982 REST JASPAR yes 118241345
chr1 17887985 17887993 EHF JASPAR yes 27101972
chr1 17887985 17887993 EHF JASPAR yes 118241346
chr1 17887987 17887994 SPIB JASPAR yes 27101973
chr1 17887987 17887994 SPIB JASPAR yes 118241347
chr1 17887995 17887999 NFE TRANSFAC yes 27101974
chr1 17887995 17887999 NFE TRANSFAC yes 118241348
chr1 17888000 17888015 ZIC3 JASPAR yes 27101975
chr1 17888000 17888015 ZIC3 JASPAR yes 118241349
chr1 17888066 17888086 ESR1 JASPAR yes 27101976
chr1 17888066 17888086 ESR1 JASPAR yes 118241350
chr1 17888069 17888087 ESR2 JASPAR yes 27101977
chr1 17888069 17888087 ESR2 JASPAR yes 118241351
chr1 17888071 17888086 ESR2 JASPAR yes 27101978
chr1 17888071 17888086 ESR2 JASPAR yes 118241352
chr1 17888071 17888091 ESR1 JASPAR yes 27101979
chr1 17888071 17888091 ESR1 JASPAR yes 118241353
chr1 17888085 17888100 TFAP2A JASPAR yes 27101980
chr1 17888085 17888100 TFAP2C JASPAR yes 27101981
chr1 17888085 17888100 TFAP2A JASPAR yes 118241354
chr1 17888085 17888100 TFAP2C JASPAR yes 118241355
chr1 17888087 17888102 TFAP2C JASPAR yes 27101982
chr1 17888087 17888102 TFAP2C JASPAR yes 118241356
chr1 17888088 17888099 TFAP2A JASPAR yes 27101983
chr1 17888088 17888099 TFAP2B JASPAR yes 27101984
chr1 17888088 17888099 TFAP2C JASPAR yes 27101985
chr1 17888088 17888099 TFAP2A JASPAR yes 118241357
chr1 17888088 17888099 TFAP2B JASPAR yes 118241358
chr1 17888088 17888099 TFAP2C JASPAR yes 118241359
chr1 17888138 17888142 H4TF2 TRANSFAC yes 27101986
chr1 17888138 17888142 H4TF2 TRANSFAC yes 118241360
chr1 17888139 17888154 TFAP2A JASPAR yes 27101987
chr1 17888139 17888154 TFAP2C JASPAR yes 27101988
chr1 17888139 17888154 TFAP2A JASPAR yes 118241361
chr1 17888139 17888154 TFAP2C JASPAR yes 118241362
chr1 17888140 17888151 EBF1 JASPAR yes 27101989
chr1 17888140 17888151 TFAP2A JASPAR yes 27101990
chr1 17888140 17888151 TFAP2B JASPAR yes 27101991
chr1 17888140 17888151 TFAP2C JASPAR yes 27101992
chr1 17888140 17888151 EBF1 JASPAR yes 118241363
chr1 17888140 17888151 TFAP2A JASPAR yes 118241364
chr1 17888140 17888151 TFAP2B JASPAR yes 118241365
chr1 17888140 17888151 TFAP2C JASPAR yes 118241366
chr1 17888141 17888150 TFAP2A JASPAR yes 27101993
chr1 17888141 17888150 TFAP2A JASPAR yes 118241367
chr1 17888145 17888159 PLAG1 JASPAR yes 27101994
chr1 17888145 17888159 PLAG1 JASPAR yes 118241368
chr1 17888149 17888153 NFE TRANSFAC yes 27101995
chr1 17888149 17888153 NFE TRANSFAC yes 118241369
chr1 17888157 17888177 ESR1 JASPAR yes 27101996
chr1 17888157 17888177 ESR1 JASPAR yes 118241370
chr1 17888176 17888191 TFAP2A JASPAR yes 27101997
chr1 17888176 17888191 TFAP2C JASPAR yes 27101998
chr1 17888176 17888191 TFAP2A JASPAR yes 118241371
chr1 17888176 17888191 TFAP2C JASPAR yes 118241372
chr1 17888195 17888200 ETS2 TRANSFAC yes 27101999
chr1 17888195 17888200 ETS2 TRANSFAC yes 118241373
chr1 17888197 17888212 HSF1 JASPAR yes 27102000
chr1 17888197 17888212 HSF1 JASPAR yes 118241374
chr1 17888208 17888212 LFA1 TRANSFAC yes 27102001
chr1 17888208 17888212 LFA1 TRANSFAC yes 118241375
chr1 17888208 17888219 USF2 JASPAR yes 27102002
chr1 17888208 17888219 USF2 JASPAR yes 118241376
chr1 17888209 17888219 TFEB JASPAR yes 27102003
chr1 17888209 17888219 TFEC JASPAR yes 27102004
chr1 17888209 17888219 TFEB JASPAR yes 118241377
chr1 17888209 17888219 TFEC JASPAR yes 118241378
chr1 17888209 17888220 USF1 JASPAR yes 27102005
chr1 17888209 17888220 USF1 JASPAR yes 118241379
chr1 17888209 17888223 JUN JASPAR yes 27102006
chr1 17888209 17888223 JUN JASPAR yes 118241380
chr1 17888212 17888223 FOSL2 JASPAR yes 27102007
chr1 17888212 17888223 JUNB JASPAR yes 27102008
chr1 17888212 17888223 FOSL2 JASPAR yes 118241381
chr1 17888212 17888223 JUNB JASPAR yes 118241382
chr1 17888213 17888224 FOS JASPAR yes 27102009
chr1 17888213 17888224 FOSL1 JASPAR yes 27102010
chr1 17888213 17888224 JUND JASPAR yes 27102011
chr1 17888213 17888224 NFE2 JASPAR yes 27102012
chr1 17888213 17888224 FOS JASPAR yes 118241383
chr1 17888213 17888224 FOSL1 JASPAR yes 118241384
chr1 17888213 17888224 JUND JASPAR yes 118241385
chr1 17888213 17888224 NFE2 JASPAR yes 118241386
chr1 17888214 17888223 JDP2 JASPAR yes 27102013
chr1 17888214 17888223 JDP2 JASPAR yes 118241387
chr1 17888214 17888225 FOSL2 JASPAR yes 27102014
chr1 17888214 17888225 JUNB JASPAR yes 27102015
chr1 17888214 17888225 FOSL2 JASPAR yes 118241388
chr1 17888214 17888225 JUNB JASPAR yes 118241389
chr1 17888214 17888228 JUN JASPAR yes 27102016
chr1 17888214 17888228 JUN JASPAR yes 118241390
chr1 17888228 17888249 IRF1 JASPAR yes 27102017
chr1 17888228 17888249 IRF1 JASPAR yes 118241391
chr1 17888231 17888245 SPI1 JASPAR yes 27102018
chr1 17888231 17888245 SPI1 JASPAR yes 118241392
chr1 17888234 17888255 IRF1 JASPAR yes 27102019
chr1 17888234 17888255 IRF1 JASPAR yes 118241393
chr1 17888236 17888251 STAT2 JASPAR yes 27102020
chr1 17888236 17888251 STAT2 JASPAR yes 118241394
chr1 17888239 17888253 IRF7 JASPAR yes 27102021
chr1 17888239 17888253 IRF7 JASPAR yes 118241395
chr1 17888240 17888261 IRF1 JASPAR yes 27102022
chr1 17888240 17888261 IRF1 JASPAR yes 118241396
chr1 17888241 17888247 TCF4 TRANSFAC yes 27102023
chr1 17888241 17888247 TCF4 TRANSFAC yes 118241397
chr1 17888241 17888256 FOXP1 JASPAR yes 27102024
chr1 17888241 17888256 FOXP1 JASPAR yes 118241398
chr1 17888242 17888251 SRY JASPAR yes 27102025
chr1 17888242 17888251 SRY JASPAR yes 118241399
chr1 17888242 17888253 FOXP2 JASPAR yes 27102026
chr1 17888242 17888253 FOXP2 JASPAR yes 118241400
chr1 17888242 17888254 FOXC2 JASPAR yes 27102027
chr1 17888242 17888254 FOXC2 JASPAR yes 118241401
chr1 17888242 17888257 STAT2 JASPAR yes 27102028
chr1 17888242 17888257 STAT2 JASPAR yes 118241402
chr1 17888244 17888252 FOXO3 JASPAR yes 27102029
chr1 17888244 17888252 FOXO3 JASPAR yes 118241403
chr1 17888246 17888267 IRF1 JASPAR yes 27102030
chr1 17888246 17888267 IRF1 JASPAR yes 118241404
chr1 17888248 17888253 ETS2 TRANSFAC yes 27102031
chr1 17888248 17888253 ETS2 TRANSFAC yes 118241405
chr1 17888248 17888263 PRDM1 JASPAR yes 27102032
chr1 17888248 17888263 PRDM1 JASPAR yes 118241406
chr1 17888250 17888271 IRF1 JASPAR yes 27102033
chr1 17888250 17888271 IRF1 JASPAR yes 118241407
chr1 17888252 17888267 PRDM1 JASPAR yes 27102034
chr1 17888252 17888267 STAT2 JASPAR yes 27102035
chr1 17888252 17888267 PRDM1 JASPAR yes 118241408
chr1 17888252 17888267 STAT2 JASPAR yes 118241409
chr1 17888254 17888266 IRF1 JASPAR yes 27102036
chr1 17888254 17888266 IRF1 JASPAR yes 118241410
chr1 17888264 17888280 SRF JASPAR yes 27102037
chr1 17888264 17888280 SRF JASPAR yes 118241411
chr1 17888265 17888277 SRF JASPAR yes 27102038
chr1 17888265 17888277 SRF JASPAR yes 118241412
chr1 17888283 17888298 HNF4A JASPAR yes 27102039
chr1 17888283 17888298 HNF4A JASPAR yes 118241413
chr1 17888284 17888298 NR2F1 JASPAR yes 27102040
chr1 17888284 17888298 NR2F1 JASPAR yes 118241414
chr1 17888284 17888299 HNF4G JASPAR yes 27102041
chr1 17888284 17888299 HNF4G JASPAR yes 118241415
chr1 17888284 17888301 RARA JASPAR yes 27102042
chr1 17888284 17888301 RARA JASPAR yes 118241416
chr1 17888291 17888305 SPI1 JASPAR yes 27102043
chr1 17888291 17888305 SPI1 JASPAR yes 118241417
SNP sites on vista572[chr1:17887951-17888293]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 17887963 rs2256114 T C
REST
120076
chr1 17888002 rs181362634 C T
ZIC3
120077
chr1 17888018 rs80181380 C G no 120078
chr1 17888029 rs143162044 A G no 120079
chr1 17888105 rs552518377 G A no 120080
chr1 17888136 rs535155466 G A no 120081
Genes possibly regulated by vista572[chr1:17887951-17888293]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 17866330 18024369 + ARHGEF10L ENSG00000074964.12 17866330 0.8 1.0 247 78379
Expression level of Genes
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miRNAs possibly regulated by vista572[chr1:17887951-17888293]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results