EnhancerDB
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  3. vista5720[chr1:236027883-236028291]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5720[chr1:236027883-236028291]
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Tissue distribution of vista5720
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Transcription factor that possibly regulate vista5720[chr1:236027883-236028291]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236027881 236027891 MZF1 JASPAR yes 36382531
chr1 236027881 236027891 MZF1 JASPAR yes 118489362
chr1 236027892 236027898 SOX10 JASPAR yes 36382532
chr1 236027892 236027898 SOX10 JASPAR yes 118489363
chr1 236027927 236027931 YY1 TRANSFAC yes 36382533
chr1 236027927 236027931 YY1 TRANSFAC yes 118489364
chr1 236027941 236027956 TFAP2A JASPAR yes 36382534
chr1 236027941 236027956 TFAP2C JASPAR yes 36382535
chr1 236027941 236027956 TFAP2A JASPAR yes 118489365
chr1 236027941 236027956 TFAP2C JASPAR yes 118489366
chr1 236027942 236027953 TFAP2A JASPAR yes 36382536
chr1 236027942 236027953 TFAP2B JASPAR yes 36382537
chr1 236027942 236027953 TFAP2C JASPAR yes 36382538
chr1 236027942 236027953 TFAP2A JASPAR yes 118489367
chr1 236027942 236027953 TFAP2B JASPAR yes 118489368
chr1 236027942 236027953 TFAP2C JASPAR yes 118489369
chr1 236027942 236027954 INSM1 JASPAR yes 36382539
chr1 236027942 236027954 INSM1 JASPAR yes 118489370
chr1 236027943 236027952 TFAP2A JASPAR yes 36382540
chr1 236027943 236027952 TFAP2A JASPAR yes 118489371
chr1 236027947 236027952 SP1 TRANSFAC yes 36382541
chr1 236027947 236027952 SP1 TRANSFAC yes 118489372
chr1 236028000 236028006 ZNF354C JASPAR yes 36382542
chr1 236028000 236028006 ZNF354C JASPAR yes 118489373
chr1 236028040 236028044 LFA1 TRANSFAC yes 36382543
chr1 236028040 236028044 LFA1 TRANSFAC yes 118489374
chr1 236028043 236028052 SOX9 JASPAR yes 36382544
chr1 236028043 236028052 SOX9 JASPAR yes 118489375
chr1 236028046 236028057 YY2 JASPAR yes 36382545
chr1 236028046 236028057 YY2 JASPAR yes 118489376
chr1 236028047 236028059 HLF JASPAR yes 36382546
chr1 236028047 236028059 HLF JASPAR yes 118489377
chr1 236028071 236028090 PAX5 JASPAR yes 36382547
chr1 236028071 236028090 PAX5 JASPAR yes 118489378
chr1 236028079 236028095 ZNF143 JASPAR yes 36382548
chr1 236028079 236028095 ZNF143 JASPAR yes 118489379
chr1 236028083 236028103 RREB1 JASPAR yes 36382549
chr1 236028083 236028103 RREB1 JASPAR yes 118489380
chr1 236028087 236028092 SP1 TRANSFAC yes 36382550
chr1 236028087 236028092 SP1 TRANSFAC yes 118489381
chr1 236028110 236028120 EN2 JASPAR yes 36382551
chr1 236028110 236028120 GBX1 JASPAR yes 36382552
chr1 236028110 236028120 GSX1 JASPAR yes 36382553
chr1 236028110 236028120 EN2 JASPAR yes 118489382
chr1 236028110 236028120 GBX1 JASPAR yes 118489383
chr1 236028110 236028120 GSX1 JASPAR yes 118489384
chr1 236028111 236028115 H1TF2 TRANSFAC yes 36382554
chr1 236028111 236028115 NFE TRANSFAC yes 36382555
chr1 236028111 236028115 SRF TRANSFAC yes 36382556
chr1 236028111 236028115 H1TF2 TRANSFAC yes 118489385
chr1 236028111 236028115 NFE TRANSFAC yes 118489386
chr1 236028111 236028115 SRF TRANSFAC yes 118489387
chr1 236028111 236028119 BSX JASPAR yes 36382557
chr1 236028111 236028119 DLX6 JASPAR yes 36382558
chr1 236028111 236028119 MSX1 JASPAR yes 36382559
chr1 236028111 236028119 MSX2 JASPAR yes 36382560
chr1 236028111 236028119 BSX JASPAR yes 118489388
chr1 236028111 236028119 DLX6 JASPAR yes 118489389
chr1 236028111 236028119 MSX1 JASPAR yes 118489390
chr1 236028111 236028119 MSX2 JASPAR yes 118489391
chr1 236028127 236028137 SREBF1 JASPAR yes 36382561
chr1 236028127 236028137 SREBF1 JASPAR yes 118489392
chr1 236028136 236028154 ESR2 JASPAR yes 36382562
chr1 236028136 236028154 ESR2 JASPAR yes 118489393
chr1 236028139 236028150 USF1 JASPAR yes 36382563
chr1 236028139 236028150 USF2 JASPAR yes 36382564
chr1 236028139 236028150 USF1 JASPAR yes 118489394
chr1 236028139 236028150 USF2 JASPAR yes 118489395
chr1 236028140 236028150 SREBF2 JASPAR yes 36382565
chr1 236028140 236028150 SREBF2 JASPAR yes 118489396
chr1 236028142 236028147 USF2 TRANSFAC yes 36382566
chr1 236028142 236028147 USF2 TRANSFAC yes 118489397
chr1 236028153 236028158 ETS2 TRANSFAC yes 36382567
chr1 236028153 236028158 ETS2 TRANSFAC yes 118489398
chr1 236028208 236028214 SOX10 JASPAR yes 36382568
chr1 236028208 236028214 SOX10 JASPAR yes 118489399
chr1 236028220 236028231 FOSL1 JASPAR yes 36382569
chr1 236028220 236028231 FOSL1 JASPAR yes 118489400
chr1 236028222 236028233 BATF JASPAR yes 36382570
chr1 236028222 236028233 BATF JASPAR yes 118489401
chr1 236028223 236028244 IRF1 JASPAR yes 36382571
chr1 236028223 236028244 IRF1 JASPAR yes 118489402
chr1 236028226 236028240 IRF7 JASPAR yes 36382572
chr1 236028226 236028240 IRF7 JASPAR yes 118489403
chr1 236028229 236028244 MEF2C JASPAR yes 36382573
chr1 236028229 236028244 MEF2C JASPAR yes 118489404
chr1 236028229 236028250 IRF1 JASPAR yes 36382574
chr1 236028229 236028250 IRF1 JASPAR yes 118489405
chr1 236028230 236028245 MEF2A JASPAR yes 36382575
chr1 236028230 236028245 MEF2A JASPAR yes 118489406
chr1 236028231 236028243 MEF2A JASPAR yes 36382576
chr1 236028231 236028243 MEF2B JASPAR yes 36382577
chr1 236028231 236028243 MEF2D JASPAR yes 36382578
chr1 236028231 236028243 MEF2A JASPAR yes 118489407
chr1 236028231 236028243 MEF2B JASPAR yes 118489408
chr1 236028231 236028243 MEF2D JASPAR yes 118489409
chr1 236028232 236028242 MEF2A JASPAR yes 36382579
chr1 236028232 236028242 MEF2A JASPAR yes 118489410
chr1 236028233 236028248 PRDM1 JASPAR yes 36382580
chr1 236028233 236028248 PRDM1 JASPAR yes 118489411
chr1 236028233 236028251 IRF2 JASPAR yes 36382581
chr1 236028233 236028251 IRF2 JASPAR yes 118489412
chr1 236028234 236028246 IRF1 JASPAR yes 36382582
chr1 236028234 236028246 IRF1 JASPAR yes 118489413
chr1 236028234 236028249 LEF1 JASPAR yes 36382583
chr1 236028234 236028249 LEF1 JASPAR yes 118489414
chr1 236028265 236028278 NFKB1 JASPAR yes 36382584
chr1 236028265 236028278 NFKB1 JASPAR yes 118489415
chr1 236028285 236028300 STAT2 JASPAR yes 36382585
chr1 236028285 236028300 STAT2 JASPAR yes 118489416
SNP sites on vista5720[chr1:236027883-236028291]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236027909 rs112843904 A G no 1052626
chr1 236027956 rs12760043 G A
TFAP2A TFAP2C
1052627
chr1 236028011 rs367575741 C T no 1052628
chr1 236028050 rs145363852 T C
HLF SOX9 YY2
1052629
chr1 236028169 rs143706899 C T no 1052630
chr1 236028184 rs6700301 A G no 1052631
chr1 236028226 rs111450686 C G
BATF FOSL1 IRF1 IRF7
1052632
chr1 236028227 rs551931074 TCAAAA T
BATF FOSL1 IRF1 IRF7
1052633
Genes possibly regulated by vista5720[chr1:236027883-236028291]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235824341 236046940 - LYST ENSG00000143669.9 236046940 0.86 1.0 1972 81351
Expression level of Genes
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miRNAs possibly regulated by vista5720[chr1:236027883-236028291]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results