EnhancerDB
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  3. vista5722[chr1:236031049-236031919]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5722[chr1:236031049-236031919]
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Tissue distribution of vista5722
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Transcription factor that possibly regulate vista5722[chr1:236031049-236031919]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236029366 236031556 POLR2A UCSC Txn Factor no Conserved 107886079
chr1 236029366 236031556 POLR2A UCSC Txn Factor no Conserved 107886080
chr1 236031223 236031471 RUNX3 UCSC Txn Factor no Conserved 107886109
chr1 236031564 236031796 SPI1 UCSC Txn Factor no Conserved 107886116
chr1 236031074 236031092 NR3C1 JASPAR yes 118489430
chr1 236031084 236031100 SOX4 JASPAR yes 118489431
chr1 236031116 236031122 NFIC JASPAR yes 118489432
chr1 236031121 236031137 SOX8 JASPAR yes 118489433
chr1 236031131 236031143 MEF2A JASPAR yes 118489434
chr1 236031131 236031143 MEF2B JASPAR yes 118489435
chr1 236031131 236031143 MEF2D JASPAR yes 118489436
chr1 236031132 236031142 MEF2A JASPAR yes 118489437
chr1 236031134 236031149 MAFK JASPAR yes 118489438
chr1 236031156 236031171 STAT1 JASPAR yes 118489439
chr1 236031158 236031165 MEIS1 JASPAR yes 118489440
chr1 236031158 236031166 MEIS2 JASPAR yes 118489441
chr1 236031158 236031166 MEIS3 JASPAR yes 118489442
chr1 236031174 236031185 FOXH1 JASPAR yes 118489443
chr1 236031183 236031200 ZNF410 JASPAR yes 118489444
chr1 236031208 236031219 CEBPA JASPAR yes 118489445
chr1 236031208 236031220 HLF JASPAR yes 118489446
chr1 236031209 236031220 CEBPB JASPAR yes 118489447
chr1 236031231 236031236 GATA2 JASPAR yes 118489448
chr1 236031269 236031273 H1TF2 TRANSFAC yes 118489449
chr1 236031269 236031273 NFE TRANSFAC yes 118489450
chr1 236031269 236031273 SRF TRANSFAC yes 118489451
chr1 236031290 236031293 MYB TRANSFAC yes 118489452
chr1 236031294 236031298 H1TF2 TRANSFAC yes 118489453
chr1 236031294 236031298 NFE TRANSFAC yes 118489454
chr1 236031294 236031298 SRF TRANSFAC yes 118489455
chr1 236031347 236031367 PPARG JASPAR yes 118489456
chr1 236031349 236031362 HSF1 JASPAR yes 118489457
chr1 236031349 236031369 PPARG JASPAR yes 118489458
chr1 236031350 236031355 TFAP2A TRANSFAC yes 118489459
chr1 236031350 236031356 MZF1 JASPAR yes 118489460
chr1 236031352 236031363 NFKB1 JASPAR yes 118489461
chr1 236031353 236031364 NFKB1 JASPAR yes 118489462
chr1 236031354 236031364 NFKB1 JASPAR yes 118489463
chr1 236031354 236031364 REL JASPAR yes 118489464
chr1 236031360 236031366 MZF1 JASPAR yes 118489465
chr1 236031370 236031380 OLIG3 JASPAR yes 118489466
chr1 236031385 236031390 ATF1 TRANSFAC yes 118489467
chr1 236031385 236031393 CREB1 JASPAR yes 118489468
chr1 236031391 236031403 HNF1B JASPAR yes 118489469
chr1 236031397 236031410 HNF1B JASPAR yes 118489470
chr1 236031399 236031402 MYB TRANSFAC yes 118489471
chr1 236031400 236031409 VENTX JASPAR yes 118489472
chr1 236031403 236031407 YY1 TRANSFAC yes 118489473
chr1 236031436 236031447 ELK4 JASPAR yes 118489474
chr1 236031436 236031447 FLI1 JASPAR yes 118489475
chr1 236031437 236031447 ETV6 JASPAR yes 118489476
chr1 236031437 236031447 GABPA JASPAR yes 118489477
chr1 236031437 236031450 ELF1 JASPAR yes 118489478
chr1 236031438 236031445 SPI1 JASPAR yes 118489479
chr1 236031438 236031446 EHF JASPAR yes 118489480
chr1 236031440 236031447 SPIB JASPAR yes 118489481
chr1 236031452 236031473 IRF1 JASPAR yes 118489482
chr1 236031456 236031468 IRF1 JASPAR yes 118489483
chr1 236031457 236031472 MEF2A JASPAR yes 118489484
chr1 236031458 236031473 FOXP1 JASPAR yes 118489485
chr1 236031458 236031473 MEF2C JASPAR yes 118489486
chr1 236031458 236031479 IRF1 JASPAR yes 118489487
chr1 236031459 236031471 FOXC2 JASPAR yes 118489488
chr1 236031459 236031471 MEF2A JASPAR yes 118489489
chr1 236031459 236031471 MEF2B JASPAR yes 118489490
chr1 236031459 236031471 MEF2D JASPAR yes 118489491
chr1 236031460 236031470 MEF2A JASPAR yes 118489492
chr1 236031461 236031465 YY1 TRANSFAC yes 118489493
chr1 236031462 236031474 IRF1 JASPAR yes 118489494
chr1 236031466 236031481 LEF1 JASPAR yes 118489495
chr1 236031467 236031471 YY1 TRANSFAC yes 118489496
chr1 236031467 236031481 GATA2 JASPAR yes 118489497
chr1 236031467 236031482 FOXP1 JASPAR yes 118489498
chr1 236031471 236031479 GATA3 JASPAR yes 118489499
chr1 236031475 236031490 FOXP1 JASPAR yes 118489500
chr1 236031477 236031492 FOXP1 JASPAR yes 118489501
chr1 236031497 236031516 PAX5 JASPAR yes 118489502
chr1 236031505 236031509 NFE TRANSFAC yes 118489503
chr1 236031522 236031526 LFA1 TRANSFAC yes 118489504
chr1 236031533 236031538 GATA2 JASPAR yes 118489505
chr1 236031554 236031557 MYB TRANSFAC yes 118489506
chr1 236031562 236031573 FLI1 JASPAR yes 118489507
chr1 236031563 236031571 FEV JASPAR yes 118489508
chr1 236031590 236031601 BATF JASPAR yes 118489509
chr1 236031595 236031599 YY1 TRANSFAC yes 118489510
chr1 236031608 236031612 TEAD2 TRANSFAC yes 118489511
chr1 236031609 236031619 POU6F2 JASPAR yes 118489512
chr1 236031629 236031637 FOXC1 JASPAR yes 118489513
chr1 236031631 236031638 NKX3-1 JASPAR yes 118489514
chr1 236031658 236031679 IRF1 JASPAR yes 118489515
chr1 236031664 236031685 IRF1 JASPAR yes 118489516
chr1 236031668 236031682 SPI1 JASPAR yes 118489517
chr1 236031668 236031682 SPIC JASPAR yes 118489518
chr1 236031669 236031682 ELF1 JASPAR yes 118489519
chr1 236031672 236031679 SPIB JASPAR yes 118489520
chr1 236031674 236031688 STAT1 JASPAR yes 118489521
chr1 236031675 236031687 IRF1 JASPAR yes 118489522
chr1 236031686 236031698 GRHL1 JASPAR yes 118489523
chr1 236031687 236031690 MYB TRANSFAC yes 118489524
chr1 236031687 236031700 SCRT2 JASPAR yes 118489525
chr1 236031689 236031695 PTF TRANSFAC yes 118489526
chr1 236031692 236031704 HLF JASPAR yes 118489527
chr1 236031692 236031705 ATF4 JASPAR yes 118489528
chr1 236031693 236031706 JUN JASPAR yes 118489529
chr1 236031700 236031704 YY1 TRANSFAC yes 118489530
chr1 236031723 236031738 FOXA1 JASPAR yes 118489531
chr1 236031726 236031737 FOXB1 JASPAR yes 118489532
chr1 236031726 236031737 FOXC1 JASPAR yes 118489533
chr1 236031727 236031731 YY1 TRANSFAC yes 118489534
chr1 236031737 236031751 RXRB JASPAR yes 118489535
chr1 236031737 236031751 RXRG JASPAR yes 118489536
chr1 236031737 236031752 NR2C2 JASPAR yes 118489537
chr1 236031738 236031753 PRDM1 JASPAR yes 118489538
chr1 236031773 236031783 HOXA13 JASPAR yes 118489539
chr1 236031773 236031783 HOXB13 JASPAR yes 118489540
chr1 236031773 236031783 HOXD13 JASPAR yes 118489541
chr1 236031802 236031814 TEF JASPAR yes 118489542
chr1 236031805 236031812 NKX3-1 JASPAR yes 118489543
chr1 236031809 236031812 MYB TRANSFAC yes 118489544
chr1 236031825 236031836 ESRRB JASPAR yes 118489545
chr1 236031827 236031830 MYB TRANSFAC yes 118489546
chr1 236031827 236031835 SF1 TRANSFAC yes 118489547
chr1 236031839 236031855 POU4F2 JASPAR yes 118489548
chr1 236031844 236031854 PAX3 JASPAR yes 118489549
chr1 236031844 236031854 PAX7 JASPAR yes 118489550
chr1 236031854 236031868 BATF3 JASPAR yes 118489551
chr1 236031857 236031868 PHOX2A JASPAR yes 118489552
chr1 236031857 236031868 PROP1 JASPAR yes 118489553
chr1 236031858 236031863 H4TF1 TRANSFAC yes 118489554
chr1 236031863 236031867 YY1 TRANSFAC yes 118489555
chr1 236031870 236031891 IRF1 JASPAR yes 118489556
chr1 236031874 236031888 JUN JASPAR yes 118489557
chr1 236031874 236031888 STAT1 JASPAR yes 118489558
chr1 236031874 236031889 STAT2 JASPAR yes 118489559
chr1 236031879 236031892 SMAD2 JASPAR yes 118489560
chr1 236031904 236031913 SRY JASPAR yes 118489561
SNP sites on vista5722[chr1:236031049-236031919]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236031443 rs577016995 C T
EHF ELF1 ELK4 ETV6 FLI1 GABPA POLR2A RUNX3 SPI1 SPIB
1052670
chr1 236031533 rs4660117 C G
GATA2 POLR2A
1052671
chr1 236031602 rs116493678 A C
SPI1
1052672
chr1 236031641 rs116007355 T G
SPI1
1052673
chr1 236031654 rs10803116 G T
SPI1
1052674
chr1 236031699 rs111627430 G A,T
ATF4 HLF JUN SCRT2 SPI1
1052675
chr1 236031778 rs571804859 TAATG T
HOXA13 HOXB13 HOXD13 SPI1
1052676
chr1 236031836 rs149049312 A G
ESRRB
1052677
chr1 236031904 rs79083223 G C
SRY
1052678
Genes possibly regulated by vista5722[chr1:236031049-236031919]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235824341 236046940 - LYST ENSG00000143669.9 236046940 0.86 1.0 1972 84979
Expression level of Genes
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miRNAs possibly regulated by vista5722[chr1:236031049-236031919]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results