EnhancerDB
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  3. vista5724[chr1:236041479-236041632]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5724[chr1:236041479-236041632]
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Tissue distribution of vista5724
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Transcription factor that possibly regulate vista5724[chr1:236041479-236041632]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236041465 236041483 MAFF JASPAR yes 36383984
chr1 236041465 236041483 MAFF JASPAR yes 118489643
chr1 236041466 236041481 MAFK JASPAR yes 36383985
chr1 236041466 236041481 MAFK JASPAR yes 118489644
chr1 236041475 236041490 TFAP2A JASPAR yes 36383986
chr1 236041475 236041490 TFAP2A JASPAR yes 118489645
chr1 236041478 236041490 TFAP2A JASPAR yes 36383987
chr1 236041478 236041490 TFAP2B JASPAR yes 36383988
chr1 236041478 236041490 TFAP2C JASPAR yes 36383989
chr1 236041478 236041490 TFAP2A JASPAR yes 118489646
chr1 236041478 236041490 TFAP2B JASPAR yes 118489647
chr1 236041478 236041490 TFAP2C JASPAR yes 118489648
chr1 236041478 236041493 TFAP2A JASPAR yes 36383990
chr1 236041478 236041493 TFAP2A JASPAR yes 118489649
chr1 236041478 236041497 RFX2 JASPAR yes 36383991
chr1 236041478 236041497 RFX2 JASPAR yes 118489650
chr1 236041492 236041507 TFAP2C JASPAR yes 36383992
chr1 236041492 236041507 TFAP2C JASPAR yes 118489651
chr1 236041493 236041504 EBF1 JASPAR yes 36383993
chr1 236041493 236041504 EBF1 JASPAR yes 118489652
chr1 236041502 236041511 ZEB1 JASPAR yes 36383994
chr1 236041502 236041511 ZEB1 JASPAR yes 118489653
chr1 236041503 236041518 ESR2 JASPAR yes 36383995
chr1 236041503 236041518 ESR2 JASPAR yes 118489654
chr1 236041524 236041534 MZF1 JASPAR yes 36383996
chr1 236041524 236041534 MZF1 JASPAR yes 118489655
chr1 236041527 236041538 NFKB1 JASPAR yes 36383997
chr1 236041527 236041538 NFKB1 JASPAR yes 118489656
chr1 236041551 236041561 NFIA JASPAR yes 36383998
chr1 236041551 236041561 NFIA JASPAR yes 118489657
chr1 236041552 236041561 NFIX JASPAR yes 36383999
chr1 236041552 236041561 NFIX JASPAR yes 118489658
chr1 236041553 236041559 NFIC JASPAR yes 36384000
chr1 236041553 236041559 NFIC JASPAR yes 118489659
chr1 236041615 236041626 GCM1 JASPAR yes 36384001
chr1 236041615 236041626 GCM1 JASPAR yes 118489660
chr1 236041622 236041637 HNF4A JASPAR yes 36384002
chr1 236041622 236041637 HNF4A JASPAR yes 118489661
SNP sites on vista5724[chr1:236041479-236041632]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236041586 rs145124875 G A,T no 1052766
Genes possibly regulated by vista5724[chr1:236041479-236041632]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235824341 236046940 - LYST ENSG00000143669.9 236046940 0.86 1.0 1972 94692
Expression level of Genes
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miRNAs possibly regulated by vista5724[chr1:236041479-236041632]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results