EnhancerDB
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  3. vista5726[chr1:236081357-236081630]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5726[chr1:236081357-236081630]
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Tissue distribution of vista5726
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Transcription factor that possibly regulate vista5726[chr1:236081357-236081630]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236081367 236081373 NFIC JASPAR yes 36387843
chr1 236081367 236081373 NFIC JASPAR yes 118489797
chr1 236081411 236081416 GATA2 JASPAR yes 36387844
chr1 236081411 236081416 GATA2 JASPAR yes 118489798
chr1 236081416 236081430 PLAG1 JASPAR yes 36387845
chr1 236081416 236081430 PLAG1 JASPAR yes 118489799
chr1 236081425 236081437 ZBTB7A JASPAR yes 36387846
chr1 236081425 236081437 ZBTB7A JASPAR yes 118489800
chr1 236081426 236081438 ZBTB7B JASPAR yes 36387847
chr1 236081426 236081438 ZBTB7C JASPAR yes 36387848
chr1 236081426 236081438 ZBTB7B JASPAR yes 118489801
chr1 236081426 236081438 ZBTB7C JASPAR yes 118489802
chr1 236081430 236081450 RREB1 JASPAR yes 36387849
chr1 236081430 236081450 RREB1 JASPAR yes 118489803
chr1 236081436 236081443 SP1 TRANSFAC yes 36387850
chr1 236081436 236081443 SP1 TRANSFAC yes 118489804
chr1 236081437 236081442 SP1 TRANSFAC yes 36387851
chr1 236081437 236081442 SP1 TRANSFAC yes 118489805
chr1 236081437 236081443 SP1 TRANSFAC yes 36387852
chr1 236081437 236081443 SP1 TRANSFAC yes 118489806
chr1 236081437 236081444 SP1 TRANSFAC yes 36387853
chr1 236081437 236081444 SP1 TRANSFAC yes 118489807
chr1 236081438 236081450 INSM1 JASPAR yes 36387854
chr1 236081438 236081450 INSM1 JASPAR yes 118489808
chr1 236081445 236081454 HIC2 JASPAR yes 36387855
chr1 236081445 236081454 HIC2 JASPAR yes 118489809
chr1 236081475 236081494 CTCF JASPAR yes 36387856
chr1 236081475 236081494 CTCF JASPAR yes 118489810
chr1 236081477 236081496 CTCF JASPAR yes 36387857
chr1 236081477 236081496 CTCF JASPAR yes 118489811
chr1 236081478 236081484 ZNF354C JASPAR yes 36387858
chr1 236081478 236081484 ZNF354C JASPAR yes 118489812
chr1 236081482 236081492 FIGLA JASPAR yes 36387859
chr1 236081482 236081492 FIGLA JASPAR yes 118489813
chr1 236081482 236081493 USF2 JASPAR yes 36387860
chr1 236081482 236081493 USF2 JASPAR yes 118489814
chr1 236081507 236081515 NR4A2 JASPAR yes 36387861
chr1 236081507 236081515 NR4A2 JASPAR yes 118489815
chr1 236081531 236081537 HiNF-A TRANSFAC yes 36387862
chr1 236081531 236081537 HiNF-A TRANSFAC yes 118489816
chr1 236081541 236081546 MYC TRANSFAC yes 36387863
chr1 236081541 236081546 MYC TRANSFAC yes 118489817
chr1 236081566 236081578 TAL1 JASPAR yes 36387864
chr1 236081566 236081578 TAL1 JASPAR yes 118489818
chr1 236081568 236081578 MSC JASPAR yes 36387865
chr1 236081568 236081578 TFAP4 JASPAR yes 36387866
chr1 236081568 236081578 MSC JASPAR yes 118489819
chr1 236081568 236081578 TFAP4 JASPAR yes 118489820
chr1 236081568 236081580 TAL1 JASPAR yes 36387867
chr1 236081568 236081580 TAL1 JASPAR yes 118489821
chr1 236081577 236081597 ESR1 JASPAR yes 36387868
chr1 236081577 236081597 ESR1 JASPAR yes 118489822
chr1 236081580 236081598 ESR2 JASPAR yes 36387869
chr1 236081580 236081598 ESR2 JASPAR yes 118489823
chr1 236081582 236081597 ESR2 JASPAR yes 36387870
chr1 236081582 236081597 ESR2 JASPAR yes 118489824
chr1 236081603 236081613 TFAP4 JASPAR yes 36387871
chr1 236081603 236081613 TFAP4 JASPAR yes 118489825
chr1 236081610 236081616 YY1 JASPAR yes 36387872
chr1 236081610 236081616 YY1 JASPAR yes 118489826
SNP sites on vista5726[chr1:236081357-236081630]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236081376 rs2031488 T G no 1053181
chr1 236081494 rs144880644 G A
CTCF
1053182
chr1 236081515 rs140848263 C T
NR4A2
1053183
chr1 236081559 rs143890154 G A no 1053184
chr1 236081586 rs544312583 TCA T
ESR1 ESR2
1053185
chr1 236081622 rs369642568 C T no 1053186
Genes possibly regulated by vista5726[chr1:236081357-236081630]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235824341 236046940 - LYST ENSG00000143669.9 236046940 0.86 1.0 1972 65583
Expression level of Genes
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miRNAs possibly regulated by vista5726[chr1:236081357-236081630]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results