EnhancerDB
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  3. vista5727[chr1:236082498-236082788]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5727[chr1:236082498-236082788]
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Tissue distribution of vista5727
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Transcription factor that possibly regulate vista5727[chr1:236082498-236082788]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236082487 236082502 HNF4G JASPAR yes 36387959
chr1 236082487 236082502 HNF4G JASPAR yes 118489827
chr1 236082488 236082503 HNF4A JASPAR yes 36387960
chr1 236082488 236082503 HNF4A JASPAR yes 118489828
chr1 236082516 236082528 PBX1 JASPAR yes 36387961
chr1 236082516 236082528 PBX1 JASPAR yes 118489829
chr1 236082524 236082539 HSF1 JASPAR yes 36387962
chr1 236082524 236082539 HSF1 JASPAR yes 118489830
chr1 236082530 236082541 TFAP2A JASPAR yes 36387963
chr1 236082530 236082541 TFAP2B JASPAR yes 36387964
chr1 236082530 236082541 TFAP2A JASPAR yes 118489831
chr1 236082530 236082541 TFAP2B JASPAR yes 118489832
chr1 236082530 236082543 TFAP2B JASPAR yes 36387965
chr1 236082530 236082543 TFAP2B JASPAR yes 118489833
chr1 236082536 236082549 NFKB1 JASPAR yes 36387966
chr1 236082536 236082549 NFKB2 JASPAR yes 36387967
chr1 236082536 236082549 NFKB1 JASPAR yes 118489834
chr1 236082536 236082549 NFKB2 JASPAR yes 118489835
chr1 236082537 236082542 SP1 TRANSFAC yes 36387968
chr1 236082537 236082542 SP1 TRANSFAC yes 118489836
chr1 236082537 236082548 NFKB1 JASPAR yes 36387969
chr1 236082537 236082548 NFKB1 JASPAR yes 118489837
chr1 236082563 236082567 TEAD2 TRANSFAC yes 36387970
chr1 236082563 236082567 TEAD2 TRANSFAC yes 118489838
chr1 236082566 236082577 GCM1 JASPAR yes 36387971
chr1 236082566 236082577 GCM1 JASPAR yes 118489839
chr1 236082588 236082602 IRF8 JASPAR yes 36387972
chr1 236082588 236082602 IRF8 JASPAR yes 118489840
chr1 236082588 236082603 IRF9 JASPAR yes 36387973
chr1 236082588 236082603 IRF9 JASPAR yes 118489841
chr1 236082590 236082599 RUNX2 JASPAR yes 36387974
chr1 236082590 236082599 RUNX2 JASPAR yes 118489842
chr1 236082619 236082624 ETS2 TRANSFAC yes 36387975
chr1 236082619 236082624 ETS2 TRANSFAC yes 118489843
chr1 236082642 236082656 GLIS3 JASPAR yes 36387976
chr1 236082642 236082656 GLIS3 JASPAR yes 118489844
chr1 236082647 236082657 RORA JASPAR yes 36387977
chr1 236082647 236082657 RORA JASPAR yes 118489845
chr1 236082650 236082664 RXRG JASPAR yes 36387978
chr1 236082650 236082664 RXRG JASPAR yes 118489846
chr1 236082652 236082656 ESR1 TRANSFAC yes 36387979
chr1 236082652 236082656 ESR1 TRANSFAC yes 118489847
chr1 236082659 236082663 ESR1 TRANSFAC yes 36387980
chr1 236082659 236082663 ESR1 TRANSFAC yes 118489848
chr1 236082689 236082693 YY1 TRANSFAC yes 36387981
chr1 236082689 236082693 YY1 TRANSFAC yes 118489849
chr1 236082694 236082705 JUNB JASPAR yes 36387982
chr1 236082694 236082705 JUNB JASPAR yes 118489850
chr1 236082696 236082703 JUN TRANSFAC yes 36387983
chr1 236082696 236082703 JUN TRANSFAC yes 118489851
chr1 236082705 236082720 ESR2 JASPAR yes 36387984
chr1 236082705 236082720 ESR2 JASPAR yes 118489852
chr1 236082706 236082710 ESR1 TRANSFAC yes 36387985
chr1 236082706 236082710 ESR1 TRANSFAC yes 118489853
chr1 236082711 236082715 YY1 TRANSFAC yes 36387986
chr1 236082711 236082715 YY1 TRANSFAC yes 118489854
chr1 236082714 236082719 GATA2 JASPAR yes 36387987
chr1 236082714 236082719 GATA2 JASPAR yes 118489855
chr1 236082717 236082732 MEF2C JASPAR yes 36387988
chr1 236082717 236082732 MEF2C JASPAR yes 118489856
chr1 236082718 236082733 MEF2A JASPAR yes 36387989
chr1 236082718 236082733 MEF2A JASPAR yes 118489857
chr1 236082719 236082731 MEF2A JASPAR yes 36387990
chr1 236082719 236082731 MEF2B JASPAR yes 36387991
chr1 236082719 236082731 MEF2D JASPAR yes 36387992
chr1 236082719 236082731 MEF2A JASPAR yes 118489858
chr1 236082719 236082731 MEF2B JASPAR yes 118489859
chr1 236082719 236082731 MEF2D JASPAR yes 118489860
chr1 236082720 236082730 MEF2A JASPAR yes 36387993
chr1 236082720 236082730 MEF2A JASPAR yes 118489861
chr1 236082721 236082736 FOXP1 JASPAR yes 36387994
chr1 236082721 236082736 FOXP1 JASPAR yes 118489862
chr1 236082727 236082733 TBP TRANSFAC yes 36387995
chr1 236082727 236082733 TBP TRANSFAC yes 118489863
chr1 236082749 236082759 MEF2A JASPAR yes 36387996
chr1 236082749 236082759 MEF2A JASPAR yes 118489864
chr1 236082761 236082782 ZNF263 JASPAR yes 36387997
chr1 236082761 236082782 ZNF263 JASPAR yes 118489865
chr1 236082764 236082785 ZNF263 JASPAR yes 36387998
chr1 236082764 236082785 ZNF263 JASPAR yes 118489866
chr1 236082766 236082787 IRF1 JASPAR yes 36387999
chr1 236082766 236082787 IRF1 JASPAR yes 118489867
chr1 236082767 236082788 ZNF263 JASPAR yes 36388000
chr1 236082767 236082788 ZNF263 JASPAR yes 118489868
chr1 236082768 236082789 IRF1 JASPAR yes 36388001
chr1 236082768 236082789 ZNF263 JASPAR yes 36388002
chr1 236082768 236082789 IRF1 JASPAR yes 118489869
chr1 236082768 236082789 ZNF263 JASPAR yes 118489870
chr1 236082773 236082794 ZNF263 JASPAR yes 36388003
chr1 236082773 236082794 ZNF263 JASPAR yes 118489871
chr1 236082776 236082797 ZNF263 JASPAR yes 36388004
chr1 236082776 236082797 ZNF263 JASPAR yes 118489872
chr1 236082777 236082781 YY1 TRANSFAC yes 36388005
chr1 236082777 236082781 YY1 TRANSFAC yes 118489873
chr1 236082780 236082801 ZNF263 JASPAR yes 36388006
chr1 236082780 236082801 ZNF263 JASPAR yes 118489874
chr1 236082782 236082789 SPIB JASPAR yes 36388007
chr1 236082782 236082789 SPIB JASPAR yes 118489875
chr1 236082788 236082799 E2F6 JASPAR yes 36388008
chr1 236082788 236082799 E2F6 JASPAR yes 118489876
SNP sites on vista5727[chr1:236082498-236082788]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236082534 rs34908288 C T
HSF1 TFAP2A TFAP2B
1053195
chr1 236082549 rs76776345 C A,G
NFKB1 NFKB2
1053196
chr1 236082553 rs11805496 C T no 1053197
chr1 236082595 rs76690114 G A
IRF8 IRF9 RUNX2
1053198
chr1 236082664 rs150232024 A G
RXRG
1053199
chr1 236082763 rs10803148 T C
ZNF263
1053200
Genes possibly regulated by vista5727[chr1:236082498-236082788]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235824341 236046940 - LYST ENSG00000143669.9 236046940 0.86 1.0 1972 64442
Expression level of Genes
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miRNAs possibly regulated by vista5727[chr1:236082498-236082788]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results