EnhancerDB
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  3. vista5729[chr1:236101998-236102489]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5729[chr1:236101998-236102489]
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Tissue distribution of vista5729
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Transcription factor that possibly regulate vista5729[chr1:236101998-236102489]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236102002 236102005 MYB TRANSFAC yes 36390438
chr1 236102002 236102005 MYB TRANSFAC yes 118489933
chr1 236102008 236102013 SP1 TRANSFAC yes 36390439
chr1 236102008 236102013 SP1 TRANSFAC yes 118489934
chr1 236102014 236102025 FLI1 JASPAR yes 36390440
chr1 236102014 236102025 FLI1 JASPAR yes 118489935
chr1 236102033 236102037 YY1 TRANSFAC yes 36390441
chr1 236102033 236102037 YY1 TRANSFAC yes 118489936
chr1 236102037 236102050 POU3F3 JASPAR yes 36390442
chr1 236102037 236102050 POU3F3 JASPAR yes 118489937
chr1 236102038 236102050 FOXI1 JASPAR yes 36390443
chr1 236102038 236102050 POU3F1 JASPAR yes 36390444
chr1 236102038 236102050 FOXI1 JASPAR yes 118489938
chr1 236102038 236102050 POU3F1 JASPAR yes 118489939
chr1 236102039 236102047 FOXL1 JASPAR yes 36390445
chr1 236102039 236102047 FOXL1 JASPAR yes 118489940
chr1 236102039 236102053 FOXF2 JASPAR yes 36390446
chr1 236102039 236102053 FOXF2 JASPAR yes 118489941
chr1 236102040 236102048 FOXG1 JASPAR yes 36390447
chr1 236102040 236102048 FOXG1 JASPAR yes 118489942
chr1 236102075 236102079 YY1 TRANSFAC yes 36390448
chr1 236102075 236102079 YY1 TRANSFAC yes 118489943
chr1 236102095 236102110 PRDM1 JASPAR yes 36390449
chr1 236102095 236102110 PRDM1 JASPAR yes 118489944
chr1 236102104 236102122 MAFF JASPAR yes 36390450
chr1 236102104 236102122 MAFF JASPAR yes 118489945
chr1 236102106 236102117 NRL JASPAR yes 36390451
chr1 236102106 236102117 NRL JASPAR yes 118489946
chr1 236102106 236102121 MAFK JASPAR yes 36390452
chr1 236102106 236102121 MAFK JASPAR yes 118489947
chr1 236102109 236102120 STAT3 JASPAR yes 36390453
chr1 236102109 236102120 STAT3 JASPAR yes 118489948
chr1 236102133 236102144 FLI1 JASPAR yes 36390454
chr1 236102133 236102144 FLI1 JASPAR yes 118489949
chr1 236102134 236102139 ETS2 TRANSFAC yes 36390455
chr1 236102134 236102139 ETS2 TRANSFAC yes 118489950
chr1 236102134 236102142 FEV JASPAR yes 36390456
chr1 236102134 236102142 FEV JASPAR yes 118489951
chr1 236102135 236102142 SPI1 JASPAR yes 36390457
chr1 236102135 236102142 SPI1 JASPAR yes 118489952
chr1 236102139 236102150 CEBPB JASPAR yes 36390458
chr1 236102139 236102150 CEBPB JASPAR yes 118489953
chr1 236102140 236102150 CEBPG JASPAR yes 36390459
chr1 236102140 236102150 CEBPG JASPAR yes 118489954
chr1 236102140 236102151 CEBPA JASPAR yes 36390460
chr1 236102140 236102151 CEBPA JASPAR yes 118489955
chr1 236102150 236102159 NKX3-2 JASPAR yes 36390461
chr1 236102150 236102159 NKX3-2 JASPAR yes 118489956
chr1 236102156 236102168 IRF1 JASPAR yes 36390462
chr1 236102156 236102168 IRF1 JASPAR yes 118489957
chr1 236102171 236102183 IRF1 JASPAR yes 36390463
chr1 236102171 236102183 IRF1 JASPAR yes 118489958
chr1 236102184 236102192 FEV JASPAR yes 36390464
chr1 236102184 236102192 FEV JASPAR yes 118489959
chr1 236102199 236102202 MYB TRANSFAC yes 36390465
chr1 236102199 236102202 MYB TRANSFAC yes 118489960
chr1 236102209 236102221 MEF2A JASPAR yes 36390466
chr1 236102209 236102221 MEF2B JASPAR yes 36390467
chr1 236102209 236102221 MEF2D JASPAR yes 36390468
chr1 236102209 236102221 MEF2A JASPAR yes 118489961
chr1 236102209 236102221 MEF2B JASPAR yes 118489962
chr1 236102209 236102221 MEF2D JASPAR yes 118489963
chr1 236102210 236102220 MEF2A JASPAR yes 36390469
chr1 236102210 236102220 MEF2A JASPAR yes 118489964
chr1 236102211 236102215 TEAD2 TRANSFAC yes 36390470
chr1 236102211 236102215 TEAD2 TRANSFAC yes 118489965
chr1 236102211 236102221 GSX1 JASPAR yes 36390471
chr1 236102211 236102221 GSX2 JASPAR yes 36390472
chr1 236102211 236102221 LHX2 JASPAR yes 36390473
chr1 236102211 236102221 MEOX1 JASPAR yes 36390474
chr1 236102211 236102221 MEOX2 JASPAR yes 36390475
chr1 236102211 236102221 MNX1 JASPAR yes 36390476
chr1 236102211 236102221 GSX1 JASPAR yes 118489966
chr1 236102211 236102221 GSX2 JASPAR yes 118489967
chr1 236102211 236102221 LHX2 JASPAR yes 118489968
chr1 236102211 236102221 MEOX1 JASPAR yes 118489969
chr1 236102211 236102221 MEOX2 JASPAR yes 118489970
chr1 236102211 236102221 MNX1 JASPAR yes 118489971
chr1 236102212 236102220 LBX1 JASPAR yes 36390477
chr1 236102212 236102220 PDX1 JASPAR yes 36390478
chr1 236102212 236102220 VAX1 JASPAR yes 36390479
chr1 236102212 236102220 VAX2 JASPAR yes 36390480
chr1 236102212 236102220 VSX1 JASPAR yes 36390481
chr1 236102212 236102220 VSX2 JASPAR yes 36390482
chr1 236102212 236102220 LBX1 JASPAR yes 118489972
chr1 236102212 236102220 PDX1 JASPAR yes 118489973
chr1 236102212 236102220 VAX1 JASPAR yes 118489974
chr1 236102212 236102220 VAX2 JASPAR yes 118489975
chr1 236102212 236102220 VSX1 JASPAR yes 118489976
chr1 236102212 236102220 VSX2 JASPAR yes 118489977
chr1 236102214 236102222 HOXA5 JASPAR yes 36390483
chr1 236102214 236102222 HOXA5 JASPAR yes 118489978
chr1 236102268 236102279 FOXB1 JASPAR yes 36390484
chr1 236102268 236102279 FOXB1 JASPAR yes 118489979
chr1 236102271 236102279 FOXL1 JASPAR yes 36390485
chr1 236102271 236102279 FOXL1 JASPAR yes 118489980
chr1 236102308 236102312 ESR1 TRANSFAC yes 36390486
chr1 236102308 236102312 ESR1 TRANSFAC yes 118489981
chr1 236102314 236102320 LEF1 TRANSFAC yes 36390487
chr1 236102314 236102320 SOX10 JASPAR yes 36390488
chr1 236102314 236102320 LEF1 TRANSFAC yes 118489982
chr1 236102314 236102320 SOX10 JASPAR yes 118489983
chr1 236102320 236102325 GATA2 JASPAR yes 36390489
chr1 236102320 236102325 GATA2 JASPAR yes 118489984
chr1 236102327 236102330 MYB TRANSFAC yes 36390490
chr1 236102327 236102330 MYB TRANSFAC yes 118489985
chr1 236102328 236102344 SOX4 JASPAR yes 36390491
chr1 236102328 236102344 SOX4 JASPAR yes 118489986
chr1 236102331 236102344 ZBTB18 JASPAR yes 36390492
chr1 236102331 236102344 ZBTB18 JASPAR yes 118489987
chr1 236102333 236102342 SNAI2 JASPAR yes 36390493
chr1 236102333 236102342 SNAI2 JASPAR yes 118489988
chr1 236102333 236102343 FIGLA JASPAR yes 36390494
chr1 236102333 236102343 ID4 JASPAR yes 36390495
chr1 236102333 236102343 TCF3 JASPAR yes 36390496
chr1 236102333 236102343 TCF4 JASPAR yes 36390497
chr1 236102333 236102343 FIGLA JASPAR yes 118489989
chr1 236102333 236102343 ID4 JASPAR yes 118489990
chr1 236102333 236102343 TCF3 JASPAR yes 118489991
chr1 236102333 236102343 TCF4 JASPAR yes 118489992
chr1 236102352 236102357 ETS2 TRANSFAC yes 36390498
chr1 236102352 236102357 ETS2 TRANSFAC yes 118489993
chr1 236102356 236102370 ZIC1 JASPAR yes 36390499
chr1 236102356 236102370 ZIC1 JASPAR yes 118489994
chr1 236102369 236102380 NFKB1 JASPAR yes 36390500
chr1 236102369 236102380 NFKB1 JASPAR yes 118489995
chr1 236102399 236102410 FOXH1 JASPAR yes 36390501
chr1 236102399 236102410 FOXH1 JASPAR yes 118489996
chr1 236102399 236102420 ZNF263 JASPAR yes 36390502
chr1 236102399 236102420 ZNF263 JASPAR yes 118489997
chr1 236102400 236102406 ZNF354C JASPAR yes 36390503
chr1 236102400 236102406 ZNF354C JASPAR yes 118489998
chr1 236102403 236102424 ZNF263 JASPAR yes 36390504
chr1 236102403 236102424 ZNF263 JASPAR yes 118489999
chr1 236102404 236102409 MYB TRANSFAC yes 36390505
chr1 236102404 236102409 MYB TRANSFAC yes 118490000
chr1 236102406 236102427 ZNF263 JASPAR yes 36390506
chr1 236102406 236102427 ZNF263 JASPAR yes 118490001
chr1 236102408 236102429 ZNF263 JASPAR yes 36390507
chr1 236102408 236102429 ZNF263 JASPAR yes 118490002
chr1 236102409 236102430 ZNF263 JASPAR yes 36390508
chr1 236102409 236102430 ZNF263 JASPAR yes 118490003
chr1 236102410 236102415 ETS2 TRANSFAC yes 36390509
chr1 236102410 236102415 ETS2 TRANSFAC yes 118490004
chr1 236102412 236102433 ZNF263 JASPAR yes 36390510
chr1 236102412 236102433 ZNF263 JASPAR yes 118490005
chr1 236102415 236102425 SP1 JASPAR yes 36390511
chr1 236102415 236102425 SP1 JASPAR yes 118490006
chr1 236102415 236102436 ZNF263 JASPAR yes 36390512
chr1 236102415 236102436 ZNF263 JASPAR yes 118490007
chr1 236102418 236102428 SP1 JASPAR yes 36390513
chr1 236102418 236102428 SP1 JASPAR yes 118490008
chr1 236102418 236102439 ZNF263 JASPAR yes 36390514
chr1 236102418 236102439 ZNF263 JASPAR yes 118490009
chr1 236102421 236102431 SP1 JASPAR yes 36390515
chr1 236102421 236102431 SP1 JASPAR yes 118490010
chr1 236102421 236102442 ZNF263 JASPAR yes 36390516
chr1 236102421 236102442 ZNF263 JASPAR yes 118490011
chr1 236102424 236102434 SP1 JASPAR yes 36390517
chr1 236102424 236102434 SP1 JASPAR yes 118490012
chr1 236102424 236102445 ZNF263 JASPAR yes 36390518
chr1 236102424 236102445 ZNF263 JASPAR yes 118490013
chr1 236102427 236102448 ZNF263 JASPAR yes 36390519
chr1 236102427 236102448 ZNF263 JASPAR yes 118490014
chr1 236102429 236102450 ZNF263 JASPAR yes 36390520
chr1 236102429 236102450 ZNF263 JASPAR yes 118490015
chr1 236102430 236102451 ZNF263 JASPAR yes 36390521
chr1 236102430 236102451 ZNF263 JASPAR yes 118490016
chr1 236102433 236102443 SP1 JASPAR yes 36390522
chr1 236102433 236102443 SP1 JASPAR yes 118490017
chr1 236102433 236102454 ZNF263 JASPAR yes 36390523
chr1 236102433 236102454 ZNF263 JASPAR yes 118490018
chr1 236102436 236102446 MZF1 JASPAR yes 36390524
chr1 236102436 236102446 MZF1 JASPAR yes 118490019
chr1 236102440 236102450 SP1 JASPAR yes 36390525
chr1 236102440 236102450 SP1 JASPAR yes 118490020
chr1 236102440 236102461 ZNF263 JASPAR yes 36390526
chr1 236102440 236102461 ZNF263 JASPAR yes 118490021
chr1 236102458 236102469 STAT3 JASPAR yes 36390527
chr1 236102458 236102469 STAT3 JASPAR yes 118490022
chr1 236102464 236102474 MSC JASPAR yes 36390528
chr1 236102464 236102474 MSC JASPAR yes 118490023
chr1 236102471 236102477 ETS1 JASPAR yes 36390529
chr1 236102471 236102477 ETS1 JASPAR yes 118490024
SNP sites on vista5729[chr1:236101998-236102489]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236102034 rs140430315 C G
YY1
1053484
chr1 236102207 rs555507949 T G no 1053485
chr1 236102226 rs10803159 G A no 1053486
chr1 236102249 rs560192317 C T no 1053487
chr1 236102320 rs12143070 T C
GATA2 LEF1 SOX10
1053488
chr1 236102441 rs12567233 G C
MZF1 SP1 ZNF263
1053489
chr1 236102461 rs550014289 T C
STAT3 ZNF263
1053490
chr1 236102477 rs79343888 G A,T
ETS1
1053491
chr1 236102481 rs74148934 T C no 1053492
Genes possibly regulated by vista5729[chr1:236101998-236102489]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235824341 236046940 - LYST ENSG00000143669.9 236046940 0.86 1.0 1972 44942
Expression level of Genes
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miRNAs possibly regulated by vista5729[chr1:236101998-236102489]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results