EnhancerDB
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  3. vista5730[chr1:236103652-236103741]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5730[chr1:236103652-236103741]
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Tissue distribution of vista5730
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Transcription factor that possibly regulate vista5730[chr1:236103652-236103741]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236103654 236103664 MSC JASPAR yes 36390675
chr1 236103654 236103664 MSC JASPAR yes 118490025
chr1 236103656 236103670 RORA JASPAR yes 36390676
chr1 236103656 236103670 RORA JASPAR yes 118490026
chr1 236103662 236103668 ESR1 TRANSFAC yes 36390677
chr1 236103662 236103668 ESR1 TRANSFAC yes 118490027
chr1 236103663 236103684 ZNF263 JASPAR yes 36390678
chr1 236103663 236103684 ZNF263 JASPAR yes 118490028
chr1 236103664 236103668 ESR1 TRANSFAC yes 36390679
chr1 236103664 236103668 ESR1 TRANSFAC yes 118490029
chr1 236103673 236103679 ZNF354C JASPAR yes 36390680
chr1 236103673 236103679 ZNF354C JASPAR yes 118490030
chr1 236103696 236103705 THAP1 JASPAR yes 36390681
chr1 236103696 236103705 THAP1 JASPAR yes 118490031
chr1 236103726 236103747 ZNF263 JASPAR yes 36390682
chr1 236103726 236103747 ZNF263 JASPAR yes 118490032
chr1 236103729 236103735 MZF1 JASPAR yes 36390683
chr1 236103729 236103735 MZF1 JASPAR yes 118490033
chr1 236103729 236103750 ZNF263 JASPAR yes 36390684
chr1 236103729 236103750 ZNF263 JASPAR yes 118490034
SNP sites on vista5730[chr1:236103652-236103741]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236103660 rs184583936 C G
MSC RORA
1053515
chr1 236103733 rs12045558 C T
MZF1 ZNF263
1053516
Genes possibly regulated by vista5730[chr1:236103652-236103741]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235824341 236046940 - LYST ENSG00000143669.9 236046940 0.86 1.0 1972 43288
Expression level of Genes
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miRNAs possibly regulated by vista5730[chr1:236103652-236103741]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results