EnhancerDB
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  3. vista5732[chr1:236109486-236110063]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5732[chr1:236109486-236110063]
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Tissue distribution of vista5732
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Transcription factor that possibly regulate vista5732[chr1:236109486-236110063]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236109347 236109572 FOXA2 UCSC Txn Factor no Conserved 107886457
chr1 236109815 236110221 CTCF UCSC Txn Factor no Conserved 107886472
chr1 236109867 236110137 RAD21 UCSC Txn Factor no Conserved 107886477
chr1 236109493 236109497 LFA1 TRANSFAC yes 36391455
chr1 236109493 236109497 LFA1 TRANSFAC yes 118490070
chr1 236109497 236109509 YY1 JASPAR yes 36391456
chr1 236109497 236109509 YY1 JASPAR yes 118490071
chr1 236109500 236109506 YY1 JASPAR yes 36391457
chr1 236109500 236109506 YY1 JASPAR yes 118490072
chr1 236109507 236109527 TP63 JASPAR yes 36391458
chr1 236109507 236109527 TP63 JASPAR yes 118490073
chr1 236109508 236109526 TP53 JASPAR yes 36391459
chr1 236109508 236109526 TP63 JASPAR yes 36391460
chr1 236109508 236109526 TP73 JASPAR yes 36391461
chr1 236109508 236109526 TP53 JASPAR yes 118490074
chr1 236109508 236109526 TP63 JASPAR yes 118490075
chr1 236109508 236109526 TP73 JASPAR yes 118490076
chr1 236109509 236109524 TP53 JASPAR yes 36391462
chr1 236109509 236109524 TP53 JASPAR yes 118490077
chr1 236109509 236109529 TP53 JASPAR yes 36391463
chr1 236109509 236109529 TP53 JASPAR yes 118490078
chr1 236109510 236109525 TP53 JASPAR yes 36391464
chr1 236109510 236109525 TP53 JASPAR yes 118490079
chr1 236109546 236109551 MYC TRANSFAC yes 36391465
chr1 236109546 236109551 MYC TRANSFAC yes 118490080
chr1 236109564 236109574 SP1 JASPAR yes 36391466
chr1 236109564 236109574 SP1 JASPAR yes 118490081
chr1 236109565 236109574 SP1 TRANSFAC yes 36391467
chr1 236109565 236109574 SP1 TRANSFAC yes 118490082
chr1 236109566 236109571 SP1 TRANSFAC yes 36391468
chr1 236109566 236109571 SP1 TRANSFAC yes 118490083
chr1 236109567 236109572 SP1 TRANSFAC yes 36391469
chr1 236109567 236109572 SP1 TRANSFAC yes 118490084
chr1 236109567 236109573 SP1 TRANSFAC yes 36391470
chr1 236109567 236109573 SP1 TRANSFAC yes 118490085
chr1 236109571 236109586 MEF2A JASPAR yes 36391471
chr1 236109571 236109586 MEF2A JASPAR yes 118490086
chr1 236109596 236109610 EBF1 JASPAR yes 36391472
chr1 236109596 236109610 EBF1 JASPAR yes 118490087
chr1 236109645 236109663 IRF2 JASPAR yes 36391473
chr1 236109645 236109663 IRF2 JASPAR yes 118490088
chr1 236109646 236109667 IRF1 JASPAR yes 36391474
chr1 236109646 236109667 IRF1 JASPAR yes 118490089
chr1 236109648 236109663 STAT2 JASPAR yes 36391475
chr1 236109648 236109663 STAT2 JASPAR yes 118490090
chr1 236109649 236109663 STAT1 JASPAR yes 36391476
chr1 236109649 236109663 STAT1 JASPAR yes 118490091
chr1 236109650 236109664 IRF7 JASPAR yes 36391477
chr1 236109650 236109664 IRF8 JASPAR yes 36391478
chr1 236109650 236109664 IRF7 JASPAR yes 118490092
chr1 236109650 236109664 IRF8 JASPAR yes 118490093
chr1 236109655 236109659 YY1 TRANSFAC yes 36391479
chr1 236109655 236109659 YY1 TRANSFAC yes 118490094
chr1 236109656 236109666 NFATC3 JASPAR yes 36391480
chr1 236109656 236109666 NFATC3 JASPAR yes 118490095
chr1 236109658 236109664 ETS1 JASPAR yes 36391481
chr1 236109658 236109664 ETS1 JASPAR yes 118490096
chr1 236109686 236109690 YY1 TRANSFAC yes 36391482
chr1 236109686 236109690 YY1 TRANSFAC yes 118490097
chr1 236109693 236109701 E2F1 JASPAR yes 36391483
chr1 236109693 236109701 E2F1 JASPAR yes 118490098
chr1 236109693 236109705 E2F8 JASPAR yes 36391484
chr1 236109693 236109705 E2F8 JASPAR yes 118490099
chr1 236109696 236109706 GABPA JASPAR yes 36391485
chr1 236109696 236109706 GABPA JASPAR yes 118490100
chr1 236109698 236109704 ETS1 JASPAR yes 36391486
chr1 236109698 236109704 SPI1 JASPAR yes 36391487
chr1 236109698 236109704 ETS1 JASPAR yes 118490101
chr1 236109698 236109704 SPI1 JASPAR yes 118490102
chr1 236109703 236109716 POU2F2 JASPAR yes 36391488
chr1 236109703 236109716 POU2F2 JASPAR yes 118490103
chr1 236109704 236109716 POU3F1 JASPAR yes 36391489
chr1 236109704 236109716 POU3F2 JASPAR yes 36391490
chr1 236109704 236109716 POU3F1 JASPAR yes 118490104
chr1 236109704 236109716 POU3F2 JASPAR yes 118490105
chr1 236109704 236109717 POU3F3 JASPAR yes 36391491
chr1 236109704 236109717 POU3F3 JASPAR yes 118490106
chr1 236109705 236109717 POU2F1 JASPAR yes 36391492
chr1 236109705 236109717 POU2F1 JASPAR yes 118490107
chr1 236109706 236109715 POU3F4 JASPAR yes 36391493
chr1 236109706 236109715 POU5F1B JASPAR yes 36391494
chr1 236109706 236109715 POU3F4 JASPAR yes 118490108
chr1 236109706 236109715 POU5F1B JASPAR yes 118490109
chr1 236109716 236109720 YY1 TRANSFAC yes 36391495
chr1 236109716 236109720 YY1 TRANSFAC yes 118490110
chr1 236109720 236109735 AR JASPAR yes 36391496
chr1 236109720 236109735 AR JASPAR yes 118490111
chr1 236109730 236109735 ETS2 TRANSFAC yes 36391497
chr1 236109730 236109735 ETS2 TRANSFAC yes 118490112
chr1 236109733 236109744 CEBPA JASPAR yes 36391498
chr1 236109733 236109744 CEBPA JASPAR yes 118490113
chr1 236109737 236109755 IRF2 JASPAR yes 36391499
chr1 236109737 236109755 IRF2 JASPAR yes 118490114
chr1 236109740 236109755 STAT2 JASPAR yes 36391500
chr1 236109740 236109755 STAT2 JASPAR yes 118490115
chr1 236109742 236109754 IRF1 JASPAR yes 36391501
chr1 236109742 236109754 IRF1 JASPAR yes 118490116
chr1 236109747 236109751 YY1 TRANSFAC yes 36391502
chr1 236109747 236109751 YY1 TRANSFAC yes 118490117
chr1 236109767 236109778 NFKB1 JASPAR yes 36391503
chr1 236109767 236109778 NFKB1 JASPAR yes 118490118
chr1 236109768 236109778 NFKB1 JASPAR yes 36391504
chr1 236109768 236109778 NFKB1 JASPAR yes 118490119
chr1 236109774 236109780 SP1 TRANSFAC yes 36391505
chr1 236109774 236109780 SP1 TRANSFAC yes 118490120
chr1 236109774 236109784 SP1 JASPAR yes 36391506
chr1 236109774 236109784 SP1 JASPAR yes 118490121
chr1 236109788 236109798 FIGLA JASPAR yes 36391507
chr1 236109788 236109798 FIGLA JASPAR yes 118490122
chr1 236109790 236109799 ZEB1 JASPAR yes 36391508
chr1 236109790 236109799 ZEB1 JASPAR yes 118490123
chr1 236109805 236109826 ZNF263 JASPAR yes 36391509
chr1 236109805 236109826 ZNF263 JASPAR yes 118490124
chr1 236109853 236109866 ATF4 JASPAR yes 36391510
chr1 236109853 236109866 ATF4 JASPAR yes 118490125
chr1 236109862 236109875 HSF4 JASPAR yes 36391511
chr1 236109862 236109875 HSF4 JASPAR yes 118490126
chr1 236109890 236109902 GLI2 JASPAR yes 36391512
chr1 236109890 236109902 GLI2 JASPAR yes 118490127
chr1 236109909 236109924 MEF2A JASPAR yes 36391513
chr1 236109909 236109924 MEF2A JASPAR yes 118490128
chr1 236109910 236109925 MEF2C JASPAR yes 36391514
chr1 236109910 236109925 MEF2C JASPAR yes 118490129
chr1 236109913 236109917 YY1 TRANSFAC yes 36391515
chr1 236109913 236109917 YY1 TRANSFAC yes 118490130
chr1 236109925 236109940 AR JASPAR yes 36391516
chr1 236109925 236109940 AR JASPAR yes 118490131
chr1 236109963 236109978 MEF2C JASPAR yes 36391517
chr1 236109963 236109978 MEF2C JASPAR yes 118490132
chr1 236109976 236109980 NFE TRANSFAC yes 36391518
chr1 236109976 236109980 NFE TRANSFAC yes 118490133
chr1 236110030 236110044 ONECUT1 JASPAR yes 36391519
chr1 236110030 236110044 ONECUT2 JASPAR yes 36391520
chr1 236110030 236110044 ONECUT3 JASPAR yes 36391521
chr1 236110030 236110044 ONECUT1 JASPAR yes 118490134
chr1 236110030 236110044 ONECUT2 JASPAR yes 118490135
chr1 236110030 236110044 ONECUT3 JASPAR yes 118490136
chr1 236110031 236110041 CUX1 JASPAR yes 36391522
chr1 236110031 236110041 CUX2 JASPAR yes 36391523
chr1 236110031 236110041 CUX1 JASPAR yes 118490137
chr1 236110031 236110041 CUX2 JASPAR yes 118490138
chr1 236110052 236110057 ETS2 TRANSFAC yes 36391524
chr1 236110052 236110057 ETS2 TRANSFAC yes 118490139
SNP sites on vista5732[chr1:236109486-236110063]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236109530 rs370077944 G T
FOXA2
1053605
chr1 236109633 rs190374230 C T no 1053606
chr1 236109699 rs141209526 C T
E2F1 E2F8 ETS1 GABPA SPI1
1053607
chr1 236109765 rs530941262 G T no 1053608
chr1 236109831 rs542611841 C T
CTCF
1053609
chr1 236109911 rs190098732 T C
CTCF MEF2A MEF2C RAD21
1053610
chr1 236109928 rs9803700 C T
AR CTCF RAD21
1053611
chr1 236109933 rs569609863 G A
AR CTCF RAD21
1053612
Genes possibly regulated by vista5732[chr1:236109486-236110063]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235824341 236046940 - LYST ENSG00000143669.9 236046940 0.86 1.0 1972 37454
Expression level of Genes
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miRNAs possibly regulated by vista5732[chr1:236109486-236110063]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results