EnhancerDB
  1. Home
  2. Enhancers
  3. vista5734[chr1:236116403-236116669]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5734[chr1:236116403-236116669]
Back to top
Tissue distribution of vista5734
Back to top
Transcription factor that possibly regulate vista5734[chr1:236116403-236116669]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236116255 236116664 RELA UCSC Txn Factor no Conserved 107886493
chr1 236116326 236116660 RUNX3 UCSC Txn Factor no Conserved 107886498
chr1 236116399 236116415 ZNF143 JASPAR yes 36392425
chr1 236116399 236116415 ZNF143 JASPAR yes 118490174
chr1 236116400 236116411 DMRT3 JASPAR yes 36392426
chr1 236116400 236116411 DMRT3 JASPAR yes 118490175
chr1 236116408 236116422 TLX1 JASPAR yes 36392427
chr1 236116408 236116422 TLX1 JASPAR yes 118490176
chr1 236116409 236116423 TLX1 JASPAR yes 36392428
chr1 236116409 236116423 TLX1 JASPAR yes 118490177
chr1 236116418 236116424 YY1 JASPAR yes 36392429
chr1 236116418 236116424 YY1 JASPAR yes 118490178
chr1 236116440 236116445 GATA2 JASPAR yes 36392430
chr1 236116440 236116445 GATA2 JASPAR yes 118490179
chr1 236116442 236116457 PRDM1 JASPAR yes 36392431
chr1 236116442 236116457 PRDM1 JASPAR yes 118490180
chr1 236116443 236116457 STAT1 JASPAR yes 36392432
chr1 236116443 236116457 STAT1 JASPAR yes 118490181
chr1 236116456 236116469 NFKB1 JASPAR yes 36392433
chr1 236116456 236116469 NFKB1 JASPAR yes 118490182
chr1 236116457 236116468 NFKB1 JASPAR yes 36392434
chr1 236116457 236116468 NFKB1 JASPAR yes 118490183
chr1 236116458 236116468 NFKB1 JASPAR yes 36392435
chr1 236116458 236116468 NFKB1 JASPAR yes 118490184
chr1 236116484 236116505 ZNF263 JASPAR yes 36392436
chr1 236116484 236116505 ZNF263 JASPAR yes 118490185
chr1 236116489 236116495 MZF1 JASPAR yes 36392437
chr1 236116489 236116495 MZF1 JASPAR yes 118490186
chr1 236116490 236116510 RREB1 JASPAR yes 36392438
chr1 236116490 236116510 RREB1 JASPAR yes 118490187
chr1 236116495 236116515 RREB1 JASPAR yes 36392439
chr1 236116495 236116515 RREB1 JASPAR yes 118490188
chr1 236116509 236116524 RUNX2 JASPAR yes 36392440
chr1 236116509 236116524 RUNX2 JASPAR yes 118490189
chr1 236116510 236116519 RUNX2 JASPAR yes 36392441
chr1 236116510 236116519 RUNX2 JASPAR yes 118490190
chr1 236116510 236116520 RUNX3 JASPAR yes 36392442
chr1 236116510 236116520 RUNX3 JASPAR yes 118490191
chr1 236116510 236116521 RUNX1 JASPAR yes 36392443
chr1 236116510 236116521 RUNX1 JASPAR yes 118490192
chr1 236116528 236116531 MYB TRANSFAC yes 36392444
chr1 236116528 236116531 MYB TRANSFAC yes 118490193
chr1 236116529 236116545 SOX8 JASPAR yes 36392445
chr1 236116529 236116545 SOX8 JASPAR yes 118490194
chr1 236116531 236116535 NFE TRANSFAC yes 36392446
chr1 236116531 236116535 NFE TRANSFAC yes 118490195
chr1 236116537 236116546 SOX9 JASPAR yes 36392447
chr1 236116537 236116546 SOX9 JASPAR yes 118490196
chr1 236116539 236116548 SRY JASPAR yes 36392448
chr1 236116539 236116548 SRY JASPAR yes 118490197
chr1 236116550 236116557 NFATC2 JASPAR yes 36392449
chr1 236116550 236116557 NFATC2 JASPAR yes 118490198
chr1 236116570 236116581 NFIL3 JASPAR yes 36392450
chr1 236116570 236116581 NFIL3 JASPAR yes 118490199
chr1 236116571 236116582 CEBPB JASPAR yes 36392451
chr1 236116571 236116582 CEBPB JASPAR yes 118490200
chr1 236116571 236116583 DBP JASPAR yes 36392452
chr1 236116571 236116583 HLF JASPAR yes 36392453
chr1 236116571 236116583 TEF JASPAR yes 36392454
chr1 236116571 236116583 DBP JASPAR yes 118490201
chr1 236116571 236116583 HLF JASPAR yes 118490202
chr1 236116571 236116583 TEF JASPAR yes 118490203
chr1 236116572 236116583 CEBPA JASPAR yes 36392455
chr1 236116572 236116583 CEBPA JASPAR yes 118490204
chr1 236116573 236116584 NFIL3 JASPAR yes 36392456
chr1 236116573 236116584 NFIL3 JASPAR yes 118490205
chr1 236116595 236116600 NFY TRANSFAC yes 36392457
chr1 236116595 236116600 NFY TRANSFAC yes 118490206
chr1 236116597 236116615 ESR1 JASPAR yes 36392458
chr1 236116597 236116615 ESR1 JASPAR yes 118490207
chr1 236116601 236116616 PRDM1 JASPAR yes 36392459
chr1 236116601 236116616 PRDM1 JASPAR yes 118490208
chr1 236116614 236116627 POU2F2 JASPAR yes 36392460
chr1 236116614 236116627 POU2F2 JASPAR yes 118490209
chr1 236116615 236116627 POU3F1 JASPAR yes 36392461
chr1 236116615 236116627 POU3F1 JASPAR yes 118490210
chr1 236116615 236116628 POU3F3 JASPAR yes 36392462
chr1 236116615 236116628 POU3F3 JASPAR yes 118490211
chr1 236116649 236116667 RARA JASPAR yes 36392463
chr1 236116649 236116667 RARA JASPAR yes 118490212
chr1 236116662 236116666 YY1 TRANSFAC yes 36392464
chr1 236116662 236116666 YY1 TRANSFAC yes 118490213
SNP sites on vista5734[chr1:236116403-236116669]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236116415 rs150441687 T G
RELA RUNX3 TLX1 ZNF143
1053727
chr1 236116533 rs76218670 T G
NFE RELA RUNX3 SOX8
1053728
chr1 236116560 rs72763499 G T
RELA RUNX3
1053729
chr1 236116561 rs72763500 T C
RELA RUNX3
1053730
chr1 236116590 rs35085657 C CT
RELA RUNX3
1053731
chr1 236116590 rs397803625 C CT
RELA RUNX3
1053732
Genes possibly regulated by vista5734[chr1:236116403-236116669]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235824341 236046940 - LYST ENSG00000143669.9 236046940 0.86 1.0 1972 30537
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5734[chr1:236116403-236116669]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results