EnhancerDB
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  3. vista5735[chr1:236118323-236118637]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5735[chr1:236118323-236118637]
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Tissue distribution of vista5735
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Transcription factor that possibly regulate vista5735[chr1:236118323-236118637]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236117958 236118347 EBF1 UCSC Txn Factor no Conserved 107886519
chr1 236117988 236118356 RUNX3 UCSC Txn Factor no Conserved 107886523
chr1 236118055 236118379 PAX5 UCSC Txn Factor no Conserved 107886530
chr1 236118058 236118340 SPI1 UCSC Txn Factor no Conserved 107886532
chr1 236118149 236118392 TCF12 UCSC Txn Factor no Conserved 107886545
chr1 236118308 236118323 TFAP2C JASPAR yes 36392683
chr1 236118308 236118323 TFAP2C JASPAR yes 118490214
chr1 236118323 236118338 SCRT1 JASPAR yes 36392688
chr1 236118323 236118338 SCRT1 JASPAR yes 118490215
chr1 236118325 236118338 ZBTB18 JASPAR yes 36392689
chr1 236118325 236118338 ZBTB18 JASPAR yes 118490216
chr1 236118327 236118336 SNAI2 JASPAR yes 36392690
chr1 236118327 236118336 SNAI2 JASPAR yes 118490217
chr1 236118327 236118337 FIGLA JASPAR yes 36392691
chr1 236118327 236118337 ID4 JASPAR yes 36392692
chr1 236118327 236118337 TCF3 JASPAR yes 36392693
chr1 236118327 236118337 TCF4 JASPAR yes 36392694
chr1 236118327 236118337 FIGLA JASPAR yes 118490218
chr1 236118327 236118337 ID4 JASPAR yes 118490219
chr1 236118327 236118337 TCF3 JASPAR yes 118490220
chr1 236118327 236118337 TCF4 JASPAR yes 118490221
chr1 236118329 236118338 ZEB1 JASPAR yes 36392695
chr1 236118329 236118338 ZEB1 JASPAR yes 118490222
chr1 236118330 236118338 TBX5 JASPAR yes 36392696
chr1 236118330 236118338 TBX5 JASPAR yes 118490223
chr1 236118356 236118366 MAX JASPAR yes 36392697
chr1 236118356 236118366 MAX JASPAR yes 118490224
chr1 236118371 236118382 FLI1 JASPAR yes 36392698
chr1 236118371 236118382 FLI1 JASPAR yes 118490225
chr1 236118371 236118384 ELF3 JASPAR yes 36392699
chr1 236118371 236118384 ELF3 JASPAR yes 118490226
chr1 236118372 236118382 ETV6 JASPAR yes 36392700
chr1 236118372 236118382 ETV6 JASPAR yes 118490227
chr1 236118372 236118383 ELF5 JASPAR yes 36392701
chr1 236118372 236118383 ELF5 JASPAR yes 118490228
chr1 236118372 236118385 ELF1 JASPAR yes 36392702
chr1 236118372 236118385 ELF1 JASPAR yes 118490229
chr1 236118372 236118386 SPI1 JASPAR yes 36392703
chr1 236118372 236118386 SPI1 JASPAR yes 118490230
chr1 236118373 236118380 SPI1 JASPAR yes 36392704
chr1 236118373 236118380 SPI1 JASPAR yes 118490231
chr1 236118373 236118381 EHF JASPAR yes 36392705
chr1 236118373 236118381 EHF JASPAR yes 118490232
chr1 236118374 236118395 ZNF263 JASPAR yes 36392706
chr1 236118374 236118395 ZNF263 JASPAR yes 118490233
chr1 236118406 236118417 STAT1 JASPAR yes 36392707
chr1 236118406 236118417 STAT3 JASPAR yes 36392708
chr1 236118406 236118417 STAT1 JASPAR yes 118490234
chr1 236118406 236118417 STAT3 JASPAR yes 118490235
chr1 236118439 236118456 PAX1 JASPAR yes 36392709
chr1 236118439 236118456 PAX9 JASPAR yes 36392710
chr1 236118439 236118456 PAX1 JASPAR yes 118490236
chr1 236118439 236118456 PAX9 JASPAR yes 118490237
chr1 236118460 236118474 SPI1 JASPAR yes 36392711
chr1 236118460 236118474 SPIC JASPAR yes 36392712
chr1 236118460 236118474 SPI1 JASPAR yes 118490238
chr1 236118460 236118474 SPIC JASPAR yes 118490239
chr1 236118467 236118471 YY1 TRANSFAC yes 36392713
chr1 236118467 236118471 YY1 TRANSFAC yes 118490240
chr1 236118484 236118494 NFIA JASPAR yes 36392714
chr1 236118484 236118494 NFIA JASPAR yes 118490241
chr1 236118485 236118501 ZNF143 JASPAR yes 36392715
chr1 236118485 236118501 ZNF143 JASPAR yes 118490242
chr1 236118486 236118492 NFIC JASPAR yes 36392716
chr1 236118486 236118492 NFIC JASPAR yes 118490243
chr1 236118508 236118522 PLAG1 JASPAR yes 36392717
chr1 236118508 236118522 PLAG1 JASPAR yes 118490244
chr1 236118511 236118515 YY1 TRANSFAC yes 36392718
chr1 236118511 236118515 YY1 TRANSFAC yes 118490245
chr1 236118550 236118553 MYB TRANSFAC yes 36392719
chr1 236118550 236118553 MYB TRANSFAC yes 118490246
chr1 236118559 236118568 TFAP2A TRANSFAC yes 36392720
chr1 236118559 236118568 TFAP2A TRANSFAC yes 118490247
chr1 236118566 236118576 MAX JASPAR yes 36392721
chr1 236118566 236118576 MAX JASPAR yes 118490248
chr1 236118566 236118577 USF2 JASPAR yes 36392722
chr1 236118566 236118577 USF2 JASPAR yes 118490249
chr1 236118569 236118580 USF1 JASPAR yes 36392723
chr1 236118569 236118580 USF2 JASPAR yes 36392724
chr1 236118569 236118580 USF1 JASPAR yes 118490250
chr1 236118569 236118580 USF2 JASPAR yes 118490251
chr1 236118570 236118580 MAX JASPAR yes 36392725
chr1 236118570 236118580 MAX JASPAR yes 118490252
chr1 236118597 236118611 TLX1 JASPAR yes 36392726
chr1 236118597 236118611 TLX1 JASPAR yes 118490253
chr1 236118621 236118636 MEF2A JASPAR yes 36392727
chr1 236118621 236118636 MEF2A JASPAR yes 118490254
chr1 236118633 236118637 TEAD2 TRANSFAC yes 36392728
chr1 236118633 236118637 TEAD2 TRANSFAC yes 118490255
SNP sites on vista5735[chr1:236118323-236118637]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236118351 rs17616115 A G
PAX5 RUNX3 TCF12
1053762
chr1 236118486 rs61312076 AT A
NFIA NFIC ZNF143
1053763
chr1 236118486 rs796089566 AT A
NFIA NFIC ZNF143
1053764
chr1 236118551 rs55975429 T C
MYB
1053765
chr1 236118582 rs147187126 A G no 1053766
chr1 236118594 rs58854309 G A no 1053767
chr1 236118597 rs141200328 G A
TLX1
1053768
chr1 236118615 rs79411034 G A no 1053769
Genes possibly regulated by vista5735[chr1:236118323-236118637]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 235824341 236046940 - LYST ENSG00000143669.9 236046940 0.86 1.0 1972 28617
Expression level of Genes
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miRNAs possibly regulated by vista5735[chr1:236118323-236118637]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results