EnhancerDB
  1. Home
  2. Enhancers
  3. vista5738[chr1:236150188-236150690]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5738[chr1:236150188-236150690]
Back to top
Tissue distribution of vista5738
Back to top
Transcription factor that possibly regulate vista5738[chr1:236150188-236150690]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236150198 236150202 YY1 TRANSFAC yes 118490352
chr1 236150199 236150207 FEV JASPAR yes 118490353
chr1 236150201 236150206 ETS2 TRANSFAC yes 118490354
chr1 236150205 236150216 FOXA1 JASPAR yes 118490355
chr1 236150205 236150220 FOXA1 JASPAR yes 118490356
chr1 236150249 236150254 ETS2 TRANSFAC yes 118490357
chr1 236150252 236150263 FOXA1 JASPAR yes 118490358
chr1 236150253 236150264 FOXC1 JASPAR yes 118490359
chr1 236150253 236150265 FOXC2 JASPAR yes 118490360
chr1 236150261 236150265 YY1 TRANSFAC yes 118490361
chr1 236150262 236150270 FEV JASPAR yes 118490362
chr1 236150264 236150269 ETS2 TRANSFAC yes 118490363
chr1 236150268 236150279 FOXA1 JASPAR yes 118490364
chr1 236150278 236150283 SP1 TRANSFAC yes 118490365
chr1 236150291 236150298 NFATC2 JASPAR yes 118490366
chr1 236150300 236150304 YY1 TRANSFAC yes 118490367
chr1 236150308 236150329 IRF1 JASPAR yes 118490368
chr1 236150312 236150330 IRF2 JASPAR yes 118490369
chr1 236150314 236150335 IRF1 JASPAR yes 118490370
chr1 236150335 236150342 SPIB JASPAR yes 118490371
chr1 236150335 236150346 FLI1 JASPAR yes 118490372
chr1 236150349 236150355 JUN TRANSFAC yes 118490373
chr1 236150353 236150356 MYB TRANSFAC yes 118490374
chr1 236150356 236150360 YY1 TRANSFAC yes 118490375
chr1 236150362 236150372 MAX JASPAR yes 118490376
chr1 236150378 236150391 POU2F2 JASPAR yes 118490377
chr1 236150390 236150410 RREB1 JASPAR yes 118490378
chr1 236150396 236150405 SOX9 JASPAR yes 118490379
chr1 236150397 236150409 FOXI1 JASPAR yes 118490380
chr1 236150433 236150439 JUN TRANSFAC yes 118490381
chr1 236150460 236150474 ONECUT1 JASPAR yes 118490382
chr1 236150460 236150474 ONECUT2 JASPAR yes 118490383
chr1 236150460 236150474 ONECUT3 JASPAR yes 118490384
chr1 236150462 236150473 PHOX2A JASPAR yes 118490385
chr1 236150463 236150473 PAX3 JASPAR yes 118490386
chr1 236150463 236150473 PAX7 JASPAR yes 118490387
chr1 236150465 236150475 EN2 JASPAR yes 118490388
chr1 236150465 236150475 ESX1 JASPAR yes 118490389
chr1 236150471 236150488 BCL6B JASPAR yes 118490390
chr1 236150474 236150483 THAP1 JASPAR yes 118490391
chr1 236150479 236150494 HNF1A JASPAR yes 118490392
chr1 236150480 236150493 HNF1B JASPAR yes 118490393
chr1 236150481 236150484 MYB TRANSFAC yes 118490394
chr1 236150482 236150492 POU6F2 JASPAR yes 118490395
chr1 236150483 236150493 GSX1 JASPAR yes 118490396
chr1 236150483 236150493 GSX2 JASPAR yes 118490397
chr1 236150483 236150493 HOXB3 JASPAR yes 118490398
chr1 236150483 236150493 POU6F1 JASPAR yes 118490399
chr1 236150484 236150492 NKX6-1 JASPAR yes 118490400
chr1 236150484 236150492 NKX6-2 JASPAR yes 118490401
chr1 236150486 236150490 YY1 TRANSFAC yes 118490402
chr1 236150487 236150497 GSX1 JASPAR yes 118490403
chr1 236150487 236150497 GSX2 JASPAR yes 118490404
chr1 236150487 236150497 HOXB3 JASPAR yes 118490405
chr1 236150487 236150497 POU6F1 JASPAR yes 118490406
chr1 236150488 236150496 NKX6-1 JASPAR yes 118490407
chr1 236150488 236150496 NKX6-2 JASPAR yes 118490408
chr1 236150488 236150498 POU6F2 JASPAR yes 118490409
chr1 236150496 236150500 YY1 TRANSFAC yes 118490410
chr1 236150496 236150506 HOXA13 JASPAR yes 118490411
chr1 236150496 236150506 HOXB13 JASPAR yes 118490412
chr1 236150496 236150506 HOXD13 JASPAR yes 118490413
chr1 236150507 236150517 POU6F2 JASPAR yes 118490414
chr1 236150511 236150515 YY1 TRANSFAC yes 118490415
chr1 236150524 236150533 SOX9 JASPAR yes 118490416
chr1 236150531 236150542 DMRT3 JASPAR yes 118490417
chr1 236150561 236150576 AR JASPAR yes 118490418
chr1 236150577 236150594 BCL6B JASPAR yes 118490419
chr1 236150578 236150581 MYB TRANSFAC yes 118490420
chr1 236150582 236150601 RFX2 JASPAR yes 118490421
chr1 236150590 236150602 ZBTB7A JASPAR yes 118490422
chr1 236150591 236150603 ZBTB7B JASPAR yes 118490423
chr1 236150591 236150603 ZBTB7C JASPAR yes 118490424
chr1 236150593 236150613 RREB1 JASPAR yes 118490425
chr1 236150609 236150615 YY1 JASPAR yes 118490426
chr1 236150614 236150623 THAP1 JASPAR yes 118490427
chr1 236150614 236150630 NFYA JASPAR yes 118490428
chr1 236150628 236150638 NFIA JASPAR yes 118490429
chr1 236150630 236150636 NFIC JASPAR yes 118490430
chr1 236150651 236150664 POU3F3 JASPAR yes 118490431
chr1 236150651 236150665 POU1F1 JASPAR yes 118490432
chr1 236150652 236150664 POU3F1 JASPAR yes 118490433
chr1 236150657 236150671 POU1F1 JASPAR yes 118490434
chr1 236150658 236150670 POU3F1 JASPAR yes 118490435
chr1 236150658 236150670 POU3F2 JASPAR yes 118490436
chr1 236150658 236150671 POU3F3 JASPAR yes 118490437
chr1 236150659 236150671 POU2F1 JASPAR yes 118490438
chr1 236150667 236150671 YY1 TRANSFAC yes 118490439
SNP sites on vista5738[chr1:236150188-236150690]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236150280 rs12566223 C T
SP1
1053969
chr1 236150283 rs540666424 C A
SP1
1053970
chr1 236150289 rs565135135 T C no 1053971
chr1 236150350 rs117511411 T C
JUN
1053972
chr1 236150459 rs4659618 A G no 1053973
chr1 236150576 rs12759840 G A
AR
1053974
chr1 236150651 rs78261107 T C
POU1F1 POU3F3
1053975
Genes possibly regulated by vista5738[chr1:236150188-236150690]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 236139130 236228462 - NID1 ENSG00000116962.10 236228462 0.7 0.91 1973 22228
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5738[chr1:236150188-236150690]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results