EnhancerDB
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  3. vista5741[chr1:236182192-236182674]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5741[chr1:236182192-236182674]
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Tissue distribution of vista5741
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Transcription factor that possibly regulate vista5741[chr1:236182192-236182674]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236182204 236182214 SMAD3 JASPAR yes 36397366
chr1 236182204 236182214 SMAD3 JASPAR yes 118490569
chr1 236182213 236182231 SRF JASPAR yes 36397367
chr1 236182213 236182231 SRF JASPAR yes 118490570
chr1 236182216 236182226 HOXA13 JASPAR yes 36397368
chr1 236182216 236182226 HOXA13 JASPAR yes 118490571
chr1 236182217 236182228 CDX2 JASPAR yes 36397369
chr1 236182217 236182228 CDX2 JASPAR yes 118490572
chr1 236182229 236182239 NEUROG2 JASPAR yes 36397370
chr1 236182229 236182239 NEUROG2 JASPAR yes 118490573
chr1 236182232 236182250 RARA JASPAR yes 36397371
chr1 236182232 236182250 RARA JASPAR yes 118490574
chr1 236182243 236182259 NFYA JASPAR yes 36397372
chr1 236182243 236182259 NFYA JASPAR yes 118490575
chr1 236182246 236182261 NFYB JASPAR yes 36397373
chr1 236182246 236182261 NFYB JASPAR yes 118490576
chr1 236182252 236182256 ESR1 TRANSFAC yes 36397374
chr1 236182252 236182256 ESR1 TRANSFAC yes 118490577
chr1 236182259 236182269 CEBPB JASPAR yes 36397375
chr1 236182259 236182269 CEBPD JASPAR yes 36397376
chr1 236182259 236182269 CEBPE JASPAR yes 36397377
chr1 236182259 236182269 CEBPG JASPAR yes 36397378
chr1 236182259 236182269 CEBPB JASPAR yes 118490578
chr1 236182259 236182269 CEBPD JASPAR yes 118490579
chr1 236182259 236182269 CEBPE JASPAR yes 118490580
chr1 236182259 236182269 CEBPG JASPAR yes 118490581
chr1 236182259 236182270 CEBPA JASPAR yes 36397379
chr1 236182259 236182270 CEBPA JASPAR yes 118490582
chr1 236182272 236182284 TEAD1 JASPAR yes 36397380
chr1 236182272 236182284 TEAD1 JASPAR yes 118490583
chr1 236182279 236182292 DUXA JASPAR yes 36397381
chr1 236182279 236182292 DUXA JASPAR yes 118490584
chr1 236182282 236182292 SREBF2 JASPAR yes 36397382
chr1 236182282 236182292 SREBF2 JASPAR yes 118490585
chr1 236182319 236182331 IRF1 JASPAR yes 36397383
chr1 236182319 236182331 IRF1 JASPAR yes 118490586
chr1 236182376 236182390 XBP1 JASPAR yes 36397384
chr1 236182376 236182390 XBP1 JASPAR yes 118490587
chr1 236182378 236182383 ATF1 TRANSFAC yes 36397385
chr1 236182378 236182383 ATF1 TRANSFAC yes 118490588
chr1 236182419 236182434 HSF1 JASPAR yes 36397386
chr1 236182419 236182434 HSF1 JASPAR yes 118490589
chr1 236182420 236182433 HSF1 JASPAR yes 36397387
chr1 236182420 236182433 HSF2 JASPAR yes 36397388
chr1 236182420 236182433 HSF4 JASPAR yes 36397389
chr1 236182420 236182433 HSF1 JASPAR yes 118490590
chr1 236182420 236182433 HSF2 JASPAR yes 118490591
chr1 236182420 236182433 HSF4 JASPAR yes 118490592
chr1 236182424 236182439 HSF1 JASPAR yes 36397390
chr1 236182424 236182439 HSF1 JASPAR yes 118490593
chr1 236182425 236182438 HSF1 JASPAR yes 36397391
chr1 236182425 236182438 HSF2 JASPAR yes 36397392
chr1 236182425 236182438 HSF4 JASPAR yes 36397393
chr1 236182425 236182438 HSF1 JASPAR yes 118490594
chr1 236182425 236182438 HSF2 JASPAR yes 118490595
chr1 236182425 236182438 HSF4 JASPAR yes 118490596
chr1 236182437 236182443 SOX10 JASPAR yes 36397394
chr1 236182437 236182443 SOX10 JASPAR yes 118490597
chr1 236182443 236182449 SP1 TRANSFAC yes 36397395
chr1 236182443 236182449 SP1 TRANSFAC yes 118490598
chr1 236182443 236182453 SP1 JASPAR yes 36397396
chr1 236182443 236182453 SP1 JASPAR yes 118490599
chr1 236182460 236182471 CEBPA JASPAR yes 36397397
chr1 236182460 236182471 CEBPA JASPAR yes 118490600
chr1 236182460 236182472 HLF JASPAR yes 36397398
chr1 236182460 236182472 HLF JASPAR yes 118490601
chr1 236182461 236182472 CEBPB JASPAR yes 36397399
chr1 236182461 236182472 CEBPB JASPAR yes 118490602
chr1 236182464 236182484 TP63 JASPAR yes 36397400
chr1 236182464 236182484 TP63 JASPAR yes 118490603
chr1 236182473 236182494 ZNF263 JASPAR yes 36397401
chr1 236182473 236182494 ZNF263 JASPAR yes 118490604
chr1 236182478 236182483 TFAP2A TRANSFAC yes 36397402
chr1 236182478 236182483 TFAP2A TRANSFAC yes 118490605
chr1 236182478 236182484 MZF1 JASPAR yes 36397403
chr1 236182478 236182484 MZF1 JASPAR yes 118490606
chr1 236182478 236182499 ZNF263 JASPAR yes 36397404
chr1 236182478 236182499 ZNF263 JASPAR yes 118490607
chr1 236182481 236182502 ZNF263 JASPAR yes 36397405
chr1 236182481 236182502 ZNF263 JASPAR yes 118490608
chr1 236182482 236182496 PLAG1 JASPAR yes 36397406
chr1 236182482 236182496 PLAG1 JASPAR yes 118490609
chr1 236182488 236182498 ZNF740 JASPAR yes 36397407
chr1 236182488 236182498 ZNF740 JASPAR yes 118490610
chr1 236182490 236182500 SP1 JASPAR yes 36397408
chr1 236182490 236182500 SP1 JASPAR yes 118490611
chr1 236182498 236182512 MTF1 JASPAR yes 36397409
chr1 236182498 236182512 MTF1 JASPAR yes 118490612
chr1 236182535 236182545 TFAP4 JASPAR yes 36397410
chr1 236182535 236182545 TFAP4 JASPAR yes 118490613
chr1 236182544 236182560 ZNF143 JASPAR yes 36397411
chr1 236182544 236182560 ZNF143 JASPAR yes 118490614
chr1 236182566 236182576 NFKB1 JASPAR yes 36397412
chr1 236182566 236182576 NFKB1 JASPAR yes 118490615
chr1 236182567 236182578 ELK4 JASPAR yes 36397413
chr1 236182567 236182578 FLI1 JASPAR yes 36397414
chr1 236182567 236182578 ELK4 JASPAR yes 118490616
chr1 236182567 236182578 FLI1 JASPAR yes 118490617
chr1 236182568 236182578 GABPA JASPAR yes 36397415
chr1 236182568 236182578 GABPA JASPAR yes 118490618
chr1 236182568 236182581 ELF1 JASPAR yes 36397416
chr1 236182568 236182581 ELF1 JASPAR yes 118490619
chr1 236182630 236182638 FOXO3 JASPAR yes 36397417
chr1 236182630 236182638 FOXO3 JASPAR yes 118490620
chr1 236182646 236182666 ESR1 JASPAR yes 36397418
chr1 236182646 236182666 ESR1 JASPAR yes 118490621
chr1 236182650 236182668 ESR1 JASPAR yes 36397419
chr1 236182650 236182668 ESR2 JASPAR yes 36397420
chr1 236182650 236182668 ESR1 JASPAR yes 118490622
chr1 236182650 236182668 ESR2 JASPAR yes 118490623
chr1 236182651 236182666 ESR2 JASPAR yes 36397421
chr1 236182651 236182666 ESR2 JASPAR yes 118490624
chr1 236182651 236182671 ESR1 JASPAR yes 36397422
chr1 236182651 236182671 ESR1 JASPAR yes 118490625
SNP sites on vista5741[chr1:236182192-236182674]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236182282 rs151108677 G A
DUXA SREBF2 TEAD1
1054334
chr1 236182324 rs141442915 C G,T
IRF1
1054335
chr1 236182450 rs145100691 C T
SP1
1054336
chr1 236182521 rs77894207 T C,G no 1054337
Genes possibly regulated by vista5741[chr1:236182192-236182674]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 236139130 236228462 - NID1 ENSG00000116962.10 236228462 0.7 0.91 1973 54212
Expression level of Genes
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miRNAs possibly regulated by vista5741[chr1:236182192-236182674]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results