EnhancerDB
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  3. vista5742[chr1:236189775-236189998]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5742[chr1:236189775-236189998]
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Tissue distribution of vista5742
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Transcription factor that possibly regulate vista5742[chr1:236189775-236189998]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236189820 236189841 MAFG JASPAR yes 118490626
chr1 236189821 236189835 JUN JASPAR yes 118490627
chr1 236189823 236189834 BATF JASPAR yes 118490628
chr1 236189824 236189835 JUNB JASPAR yes 118490629
chr1 236189824 236189837 ATF4 JASPAR yes 118490630
chr1 236189825 236189836 FOS JASPAR yes 118490631
chr1 236189825 236189836 FOSL1 JASPAR yes 118490632
chr1 236189825 236189836 NFE2 JASPAR yes 118490633
chr1 236189826 236189835 JDP2 JASPAR yes 118490634
chr1 236189826 236189837 FOSL2 JASPAR yes 118490635
chr1 236189827 236189838 BATF JASPAR yes 118490636
chr1 236189838 236189859 IRF1 JASPAR yes 118490637
chr1 236189840 236189855 STAT2 JASPAR yes 118490638
chr1 236189841 236189855 STAT1 JASPAR yes 118490639
chr1 236189842 236189856 IRF8 JASPAR yes 118490640
chr1 236189858 236189872 RORA JASPAR yes 118490641
chr1 236189861 236189871 RORA JASPAR yes 118490642
chr1 236189866 236189870 ESR1 TRANSFAC yes 118490643
chr1 236189872 236189877 SP1 TRANSFAC yes 118490644
chr1 236189874 236189879 TFAP2A TRANSFAC yes 118490645
chr1 236189874 236189880 MZF1 JASPAR yes 118490646
chr1 236189879 236189889 SREBF2 JASPAR yes 118490647
chr1 236189900 236189913 HSF1 JASPAR yes 118490648
chr1 236189900 236189913 HSF2 JASPAR yes 118490649
chr1 236189923 236189934 PROP1 JASPAR yes 118490650
chr1 236189937 236189945 GATA3 JASPAR yes 118490651
chr1 236189948 236189952 YY1 TRANSFAC yes 118490652
chr1 236189959 236189963 YY1 TRANSFAC yes 118490653
chr1 236189967 236189971 NFE TRANSFAC yes 118490654
chr1 236189981 236189984 MYB TRANSFAC yes 118490655
chr1 236189986 236189998 MEF2B JASPAR yes 118490656
chr1 236189987 236189997 MEF2A JASPAR yes 118490657
SNP sites on vista5742[chr1:236189775-236189998]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236189817 rs147042364 C T no 1054411
chr1 236189874 rs78349755 G A
MZF1 SP1 TFAP2A
1054412
chr1 236189937 rs75230991 A C
GATA3
1054413
chr1 236189961 rs10803234 A G
YY1
1054414
Genes possibly regulated by vista5742[chr1:236189775-236189998]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 236139130 236228462 - NID1 ENSG00000116962.10 236228462 0.7 0.91 1973 61536
Expression level of Genes
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miRNAs possibly regulated by vista5742[chr1:236189775-236189998]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results