EnhancerDB
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  3. vista5743[chr1:236230188-236230739]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5743[chr1:236230188-236230739]
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Tissue distribution of vista5743
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Transcription factor that possibly regulate vista5743[chr1:236230188-236230739]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236229667 236230694 POLR2A UCSC Txn Factor no Conserved 107886715
chr1 236230068 236230504 MAX UCSC Txn Factor no Conserved 107886721
chr1 236230095 236230536 RELA UCSC Txn Factor no Conserved 107886726
chr1 236230137 236230401 USF1 UCSC Txn Factor no Conserved 107886735
chr1 236230144 236230454 BHLHE40 UCSC Txn Factor no Conserved 107886738
chr1 236230150 236230480 RUNX3 UCSC Txn Factor no Conserved 107886741
chr1 236230155 236230431 USF2 UCSC Txn Factor no Conserved 107886743
chr1 236230190 236230205 MEF2A JASPAR yes 118490658
chr1 236230191 236230206 MEF2C JASPAR yes 118490659
chr1 236230194 236230198 YY1 TRANSFAC yes 118490660
chr1 236230265 236230269 NFE TRANSFAC yes 118490661
chr1 236230265 236230270 GATA1 TRANSFAC yes 118490662
chr1 236230265 236230271 GATA3 JASPAR yes 118490663
chr1 236230272 236230282 GCM2 JASPAR yes 118490664
chr1 236230275 236230287 HES7 JASPAR yes 118490665
chr1 236230276 236230286 BHLHE40 JASPAR yes 118490666
chr1 236230276 236230286 BHLHE41 JASPAR yes 118490667
chr1 236230276 236230286 HEY1 JASPAR yes 118490668
chr1 236230276 236230286 HEY2 JASPAR yes 118490669
chr1 236230276 236230286 MLXIPL JASPAR yes 118490670
chr1 236230276 236230286 MNT JASPAR yes 118490671
chr1 236230276 236230286 TFE3 JASPAR yes 118490672
chr1 236230276 236230286 TFEB JASPAR yes 118490673
chr1 236230276 236230286 TFEC JASPAR yes 118490674
chr1 236230276 236230287 USF1 JASPAR yes 118490675
chr1 236230276 236230287 USF2 JASPAR yes 118490676
chr1 236230277 236230287 MAX JASPAR yes 118490677
chr1 236230278 236230283 MYC TRANSFAC yes 118490678
chr1 236230278 236230283 USF1 TRANSFAC yes 118490679
chr1 236230278 236230283 USF2 TRANSFAC yes 118490680
chr1 236230282 236230294 HES7 JASPAR yes 118490681
chr1 236230296 236230313 RXRA JASPAR yes 118490682
chr1 236230297 236230311 SPIC JASPAR yes 118490683
chr1 236230301 236230307 MZF1 JASPAR yes 118490684
chr1 236230313 236230333 PPARG JASPAR yes 118490685
chr1 236230320 236230331 NFKB1 JASPAR yes 118490686
chr1 236230321 236230331 NFKB1 JASPAR yes 118490687
chr1 236230321 236230331 RELA JASPAR yes 118490688
chr1 236230321 236230332 NFKB1 JASPAR yes 118490689
chr1 236230322 236230332 RELA JASPAR yes 118490690
chr1 236230322 236230332 REL JASPAR yes 118490691
chr1 236230340 236230358 SRF JASPAR yes 118490692
chr1 236230343 236230355 SRF JASPAR yes 118490693
chr1 236230357 236230378 ZNF263 JASPAR yes 118490694
chr1 236230383 236230393 SP1 JASPAR yes 118490695
chr1 236230397 236230410 EOMES JASPAR yes 118490696
chr1 236230398 236230402 NFE TRANSFAC yes 118490697
chr1 236230399 236230409 TBR1 JASPAR yes 118490698
chr1 236230411 236230430 REST JASPAR yes 118490699
chr1 236230414 236230418 NFE TRANSFAC yes 118490700
chr1 236230435 236230446 STAT3 JASPAR yes 118490701
chr1 236230437 236230449 TEAD1 JASPAR yes 118490702
chr1 236230439 236230449 TEAD4 JASPAR yes 118490703
chr1 236230440 236230448 TEAD3 JASPAR yes 118490704
chr1 236230465 236230480 PRDM1 JASPAR yes 118490705
chr1 236230469 236230487 SRF JASPAR yes 118490706
chr1 236230498 236230516 NFYA JASPAR yes 118490707
chr1 236230501 236230517 NFYA JASPAR yes 118490708
chr1 236230504 236230519 NFYB JASPAR yes 118490709
chr1 236230510 236230514 H4TF2 TRANSFAC yes 118490710
chr1 236230521 236230530 NF-kappaB TRANSFAC yes 118490711
chr1 236230521 236230531 NFKB1 JASPAR yes 118490712
chr1 236230521 236230531 RELA JASPAR yes 118490713
chr1 236230521 236230531 REL JASPAR yes 118490714
chr1 236230521 236230532 NFKB1 JASPAR yes 118490715
chr1 236230525 236230544 RFX2 JASPAR yes 118490716
chr1 236230526 236230541 MAFK JASPAR yes 118490717
chr1 236230527 236230542 RFX5 JASPAR yes 118490718
chr1 236230561 236230582 MAFG JASPAR yes 118490719
chr1 236230562 236230568 TCF4 TRANSFAC yes 118490720
chr1 236230597 236230610 NR2F1 JASPAR yes 118490721
chr1 236230598 236230606 CREB1 JASPAR yes 118490722
chr1 236230601 236230605 ESR1 TRANSFAC yes 118490723
chr1 236230614 236230618 YY1 TRANSFAC yes 118490724
chr1 236230627 236230631 TEAD2 TRANSFAC yes 118490725
chr1 236230627 236230645 TP53 JASPAR yes 118490726
chr1 236230628 236230648 TP53 JASPAR yes 118490727
chr1 236230636 236230640 LFA1 TRANSFAC yes 118490728
chr1 236230657 236230662 GATA2 JASPAR yes 118490729
chr1 236230666 236230683 ZNF410 JASPAR yes 118490730
chr1 236230709 236230719 GSC2 JASPAR yes 118490731
chr1 236230709 236230719 GSC JASPAR yes 118490732
chr1 236230710 236230718 OTX2 JASPAR yes 118490733
chr1 236230716 236230724 GATA3 JASPAR yes 118490734
chr1 236230716 236230724 GATA5 JASPAR yes 118490735
chr1 236230718 236230732 JUN JASPAR yes 118490736
chr1 236230721 236230732 FOSL2 JASPAR yes 118490737
chr1 236230721 236230732 JUNB JASPAR yes 118490738
chr1 236230722 236230733 FOS JASPAR yes 118490739
chr1 236230722 236230733 JUND JASPAR yes 118490740
chr1 236230722 236230733 NFE2 JASPAR yes 118490741
chr1 236230724 236230735 BATF JASPAR yes 118490742
chr1 236230726 236230736 GSX2 JASPAR yes 118490743
chr1 236230729 236230733 YY1 TRANSFAC yes 118490744
SNP sites on vista5743[chr1:236230188-236230739]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236230221 rs11811048 C T
BHLHE40 MAX POLR2A RELA RUNX3 USF1 USF2
1054595
chr1 236230277 rs187747680 C T
BHLHE40 BHLHE41 GCM2 HES7 HEY1 HEY2 MAX MLXIPL MNT POLR2A RELA RUNX3 TFE3 TFEB TFEC USF1 USF2
1054596
chr1 236230297 rs116486662 C T
BHLHE40 MAX POLR2A RELA RUNX3 RXRA SPIC USF1 USF2
1054597
chr1 236230317 rs76183323 G A
BHLHE40 MAX POLR2A PPARG RELA RUNX3 USF1 USF2
1054598
chr1 236230534 rs139372805 A G
MAFK POLR2A RELA RFX2 RFX5
1054599
chr1 236230543 rs114590316 A G
POLR2A RFX2
1054600
chr1 236230636 rs72765476 C T
LFA1 POLR2A TP53
1054601
chr1 236230674 rs147519678 A G
POLR2A ZNF410
1054602
chr1 236230693 rs72765477 A C
POLR2A
1054603
Genes possibly regulated by vista5743[chr1:236230188-236230739]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 236139130 236228462 - NID1 ENSG00000116962.10 236228462 0.7 0.91 1973 98274
chr1 236305832 236385165 + GPR137B ENSG00000077585.9 236305832 0.82 1.0 1974 24907
Expression level of Genes
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miRNAs possibly regulated by vista5743[chr1:236230188-236230739]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results