EnhancerDB
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  3. vista5747[chr1:236319808-236320415]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5747[chr1:236319808-236320415]
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Tissue distribution of vista5747
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Transcription factor that possibly regulate vista5747[chr1:236319808-236320415]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236318999 236320607 POLR2A UCSC Txn Factor no Conserved 107886811
chr1 236319935 236320410 RUNX3 UCSC Txn Factor no Conserved 107886826
chr1 236319936 236320245 POU2F2 UCSC Txn Factor no Conserved 107886828
chr1 236319952 236320230 SPI1 UCSC Txn Factor no Conserved 107886834
chr1 236319976 236320203 EBF1 UCSC Txn Factor no Conserved 107886836
chr1 236319994 236320364 EP300 UCSC Txn Factor no Conserved 107886840
chr1 236320108 236320307 SRF UCSC Txn Factor no Conserved 107886854
chr1 236319802 236319812 TFAP4 JASPAR yes 36407250
chr1 236319802 236319812 TFAP4 JASPAR yes 118490832
chr1 236319808 236319813 ATF1 TRANSFAC yes 36407251
chr1 236319808 236319813 ATF1 TRANSFAC yes 118490833
chr1 236319833 236319836 MYB TRANSFAC yes 36407252
chr1 236319833 236319836 MYB TRANSFAC yes 118490834
chr1 236319850 236319856 SP1 TRANSFAC yes 36407253
chr1 236319850 236319856 SP1 TRANSFAC yes 118490835
chr1 236319852 236319857 SP1 TRANSFAC yes 36407254
chr1 236319852 236319857 SP1 TRANSFAC yes 118490836
chr1 236319867 236319871 NFE TRANSFAC yes 36407255
chr1 236319867 236319871 NFE TRANSFAC yes 118490837
chr1 236319898 236319904 SP1 TRANSFAC yes 36407256
chr1 236319898 236319904 SP1 TRANSFAC yes 118490838
chr1 236319898 236319908 SP1 JASPAR yes 36407257
chr1 236319898 236319908 SP1 JASPAR yes 118490839
chr1 236319900 236319911 E2F4 JASPAR yes 36407258
chr1 236319900 236319911 E2F4 JASPAR yes 118490840
chr1 236319903 236319909 SP1 TRANSFAC yes 36407259
chr1 236319903 236319909 SP1 TRANSFAC yes 118490841
chr1 236319926 236319939 ELF3 JASPAR yes 36407260
chr1 236319926 236319939 ELF3 JASPAR yes 118490842
chr1 236319927 236319937 GABPA JASPAR yes 36407261
chr1 236319927 236319937 GABPA JASPAR yes 118490843
chr1 236319927 236319939 ELF1 JASPAR yes 36407262
chr1 236319927 236319939 ELF1 JASPAR yes 118490844
chr1 236319927 236319942 STAT1 JASPAR yes 36407263
chr1 236319927 236319942 STAT1 JASPAR yes 118490845
chr1 236319929 236319935 ETS1 JASPAR yes 36407264
chr1 236319929 236319935 SPI1 JASPAR yes 36407265
chr1 236319929 236319935 ETS1 JASPAR yes 118490846
chr1 236319929 236319935 SPI1 JASPAR yes 118490847
chr1 236319929 236319940 STAT1 JASPAR yes 36407266
chr1 236319929 236319940 STAT3 JASPAR yes 36407267
chr1 236319929 236319940 STAT1 JASPAR yes 118490848
chr1 236319929 236319940 STAT3 JASPAR yes 118490849
chr1 236319945 236319959 SPI1 JASPAR yes 36407268
chr1 236319945 236319959 SPI1 JASPAR yes 118490850
chr1 236319968 236319973 H4TF1 TRANSFAC yes 36407269
chr1 236319968 236319973 H4TF1 TRANSFAC yes 118490851
chr1 236319983 236319987 NFE TRANSFAC yes 36407270
chr1 236319983 236319987 NFE TRANSFAC yes 118490852
chr1 236319983 236320003 ESR1 JASPAR yes 36407271
chr1 236319983 236320003 ESR1 JASPAR yes 118490853
chr1 236319998 236320013 MAFK JASPAR yes 36407272
chr1 236319998 236320013 MAFK JASPAR yes 118490854
chr1 236320027 236320042 AR JASPAR yes 36407273
chr1 236320027 236320042 AR JASPAR yes 118490855
chr1 236320027 236320045 NR3C1 JASPAR yes 36407274
chr1 236320027 236320045 NR3C1 JASPAR yes 118490856
chr1 236320037 236320055 MAFF JASPAR yes 36407275
chr1 236320037 236320055 MAFF JASPAR yes 118490857
chr1 236320039 236320051 NHLH1 JASPAR yes 36407276
chr1 236320039 236320051 NHLH1 JASPAR yes 118490858
chr1 236320040 236320050 NHLH1 JASPAR yes 36407277
chr1 236320040 236320050 NHLH1 JASPAR yes 118490859
chr1 236320040 236320054 JUN JASPAR yes 36407278
chr1 236320040 236320054 JUN JASPAR yes 118490860
chr1 236320044 236320055 JUND JASPAR yes 36407279
chr1 236320044 236320055 JUND JASPAR yes 118490861
chr1 236320048 236320058 EMX1 JASPAR yes 36407280
chr1 236320048 236320058 HOXB3 JASPAR yes 36407281
chr1 236320048 236320058 EMX1 JASPAR yes 118490862
chr1 236320048 236320058 HOXB3 JASPAR yes 118490863
chr1 236320053 236320072 RFX2 JASPAR yes 36407282
chr1 236320053 236320072 RFX2 JASPAR yes 118490864
chr1 236320064 236320069 TFAP2A TRANSFAC yes 36407283
chr1 236320064 236320069 TFAP2A TRANSFAC yes 118490865
chr1 236320064 236320070 MZF1 JASPAR yes 36407284
chr1 236320064 236320070 MZF1 JASPAR yes 118490866
chr1 236320077 236320086 TFAP2A JASPAR yes 36407285
chr1 236320077 236320086 TFAP2A JASPAR yes 118490867
chr1 236320084 236320096 POU2F1 JASPAR yes 36407286
chr1 236320084 236320096 POU2F1 JASPAR yes 118490868
chr1 236320085 236320094 POU3F4 JASPAR yes 36407287
chr1 236320085 236320094 POU5F1B JASPAR yes 36407288
chr1 236320085 236320094 POU3F4 JASPAR yes 118490869
chr1 236320085 236320094 POU5F1B JASPAR yes 118490870
chr1 236320097 236320103 MZF1 JASPAR yes 36407289
chr1 236320097 236320103 MZF1 JASPAR yes 118490871
chr1 236320100 236320104 H1TF2 TRANSFAC yes 36407290
chr1 236320100 236320104 NFE TRANSFAC yes 36407291
chr1 236320100 236320104 SRF TRANSFAC yes 36407292
chr1 236320100 236320104 H1TF2 TRANSFAC yes 118490872
chr1 236320100 236320104 NFE TRANSFAC yes 118490873
chr1 236320100 236320104 SRF TRANSFAC yes 118490874
chr1 236320104 236320118 SPI1 JASPAR yes 36407293
chr1 236320104 236320118 SPIC JASPAR yes 36407294
chr1 236320104 236320118 SPI1 JASPAR yes 118490875
chr1 236320104 236320118 SPIC JASPAR yes 118490876
chr1 236320105 236320118 ELF1 JASPAR yes 36407295
chr1 236320105 236320118 ELF1 JASPAR yes 118490877
chr1 236320106 236320118 EHF JASPAR yes 36407296
chr1 236320106 236320118 ELF1 JASPAR yes 36407297
chr1 236320106 236320118 ELF4 JASPAR yes 36407298
chr1 236320106 236320118 EHF JASPAR yes 118490878
chr1 236320106 236320118 ELF1 JASPAR yes 118490879
chr1 236320106 236320118 ELF4 JASPAR yes 118490880
chr1 236320106 236320119 ELF3 JASPAR yes 36407299
chr1 236320106 236320119 ELF3 JASPAR yes 118490881
chr1 236320107 236320118 ELF5 JASPAR yes 36407300
chr1 236320107 236320118 ELF5 JASPAR yes 118490882
chr1 236320108 236320118 ETV6 JASPAR yes 36407301
chr1 236320108 236320118 ETV6 JASPAR yes 118490883
chr1 236320108 236320119 ELK4 JASPAR yes 36407302
chr1 236320108 236320119 FLI1 JASPAR yes 36407303
chr1 236320108 236320119 ELK4 JASPAR yes 118490884
chr1 236320108 236320119 FLI1 JASPAR yes 118490885
chr1 236320109 236320117 EHF JASPAR yes 36407304
chr1 236320109 236320117 FEV JASPAR yes 36407305
chr1 236320109 236320117 EHF JASPAR yes 118490886
chr1 236320109 236320117 FEV JASPAR yes 118490887
chr1 236320110 236320117 SPI1 JASPAR yes 36407306
chr1 236320110 236320117 SPI1 JASPAR yes 118490888
chr1 236320137 236320148 FOXA1 JASPAR yes 36407307
chr1 236320137 236320148 FOXA1 JASPAR yes 118490889
chr1 236320137 236320152 FOXA1 JASPAR yes 36407308
chr1 236320137 236320152 FOXA1 JASPAR yes 118490890
chr1 236320153 236320159 ATF1 TRANSFAC yes 36407309
chr1 236320153 236320159 ATF1 TRANSFAC yes 118490891
chr1 236320168 236320171 MYB TRANSFAC yes 36407310
chr1 236320168 236320171 MYB TRANSFAC yes 118490892
chr1 236320182 236320188 TCF4 TRANSFAC yes 36407311
chr1 236320182 236320188 TCF4 TRANSFAC yes 118490893
chr1 236320186 236320200 SPI1 JASPAR yes 36407312
chr1 236320186 236320200 SPI1 JASPAR yes 118490894
chr1 236320188 236320204 SRF JASPAR yes 36407313
chr1 236320188 236320204 SRF JASPAR yes 118490895
chr1 236320188 236320206 SRF JASPAR yes 36407314
chr1 236320188 236320206 SRF JASPAR yes 118490896
chr1 236320189 236320194 ETS2 TRANSFAC yes 36407315
chr1 236320189 236320194 ETS2 TRANSFAC yes 118490897
chr1 236320191 236320200 SRF TRANSFAC yes 36407316
chr1 236320191 236320200 SRF TRANSFAC yes 118490898
chr1 236320191 236320203 SRF JASPAR yes 36407317
chr1 236320191 236320203 SRF JASPAR yes 118490899
chr1 236320193 236320202 CDX1 JASPAR yes 36407318
chr1 236320193 236320202 CDX1 JASPAR yes 118490900
chr1 236320193 236320204 CDX2 JASPAR yes 36407319
chr1 236320193 236320204 RUNX1 JASPAR yes 36407320
chr1 236320193 236320204 CDX2 JASPAR yes 118490901
chr1 236320193 236320204 RUNX1 JASPAR yes 118490902
chr1 236320204 236320209 GATA2 JASPAR yes 36407321
chr1 236320204 236320209 GATA2 JASPAR yes 118490903
chr1 236320211 236320222 RUNX1 JASPAR yes 36407322
chr1 236320211 236320222 RUNX1 JASPAR yes 118490904
chr1 236320217 236320221 ESR1 TRANSFAC yes 36407323
chr1 236320217 236320221 ESR1 TRANSFAC yes 118490905
chr1 236320272 236320284 MEF2A JASPAR yes 36407324
chr1 236320272 236320284 MEF2B JASPAR yes 36407325
chr1 236320272 236320284 MEF2D JASPAR yes 36407326
chr1 236320272 236320284 MEF2A JASPAR yes 118490906
chr1 236320272 236320284 MEF2B JASPAR yes 118490907
chr1 236320272 236320284 MEF2D JASPAR yes 118490908
chr1 236320282 236320301 CTCF JASPAR yes 36407327
chr1 236320282 236320301 CTCF JASPAR yes 118490909
chr1 236320283 236320298 ZIC3 JASPAR yes 36407328
chr1 236320283 236320298 ZIC4 JASPAR yes 36407329
chr1 236320283 236320298 ZIC3 JASPAR yes 118490910
chr1 236320283 236320298 ZIC4 JASPAR yes 118490911
chr1 236320284 236320298 ZIC1 JASPAR yes 36407330
chr1 236320284 236320298 ZIC1 JASPAR yes 118490912
chr1 236320291 236320309 ESR1 JASPAR yes 36407331
chr1 236320291 236320309 ESR1 JASPAR yes 118490913
chr1 236320303 236320313 MAX JASPAR yes 36407332
chr1 236320303 236320313 MAX JASPAR yes 118490914
chr1 236320304 236320314 MAX JASPAR yes 36407333
chr1 236320304 236320314 MNT JASPAR yes 36407334
chr1 236320304 236320314 MAX JASPAR yes 118490915
chr1 236320304 236320314 MNT JASPAR yes 118490916
chr1 236320305 236320312 USF1 JASPAR yes 36407335
chr1 236320305 236320312 USF1 JASPAR yes 118490917
chr1 236320305 236320315 MAX JASPAR yes 36407336
chr1 236320305 236320315 MAX JASPAR yes 118490918
chr1 236320306 236320311 MYC TRANSFAC yes 36407337
chr1 236320306 236320311 USF1 TRANSFAC yes 36407338
chr1 236320306 236320311 USF2 TRANSFAC yes 36407339
chr1 236320306 236320311 MYC TRANSFAC yes 118490919
chr1 236320306 236320311 USF1 TRANSFAC yes 118490920
chr1 236320306 236320311 USF2 TRANSFAC yes 118490921
chr1 236320306 236320313 USF1 JASPAR yes 36407340
chr1 236320306 236320313 USF1 JASPAR yes 118490922
chr1 236320312 236320319 NKX3-1 JASPAR yes 36407341
chr1 236320312 236320319 NKX3-1 JASPAR yes 118490923
chr1 236320320 236320331 E2F1 JASPAR yes 36407342
chr1 236320320 236320331 E2F1 JASPAR yes 118490924
chr1 236320321 236320326 SP1 TRANSFAC yes 36407343
chr1 236320321 236320326 SP1 TRANSFAC yes 118490925
chr1 236320331 236320335 YY1 TRANSFAC yes 36407344
chr1 236320331 236320335 YY1 TRANSFAC yes 118490926
chr1 236320337 236320347 FIGLA JASPAR yes 36407345
chr1 236320337 236320347 ID4 JASPAR yes 36407346
chr1 236320337 236320347 TCF3 JASPAR yes 36407347
chr1 236320337 236320347 TCF4 JASPAR yes 36407348
chr1 236320337 236320347 FIGLA JASPAR yes 118490927
chr1 236320337 236320347 ID4 JASPAR yes 118490928
chr1 236320337 236320347 TCF3 JASPAR yes 118490929
chr1 236320337 236320347 TCF4 JASPAR yes 118490930
chr1 236320400 236320415 STAT2 JASPAR yes 36407349
chr1 236320400 236320415 STAT2 JASPAR yes 118490931
chr1 236320407 236320411 YY1 TRANSFAC yes 36407350
chr1 236320407 236320411 YY1 TRANSFAC yes 118490932
chr1 236320414 236320423 ZEB1 JASPAR yes 36407351
chr1 236320414 236320423 ZEB1 JASPAR yes 118490933
SNP sites on vista5747[chr1:236319808-236320415]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236319833 rs550173740 C T
MYB POLR2A
1055650
chr1 236319837 rs73121076 C T
POLR2A
1055651
chr1 236319855 rs75230118 G A
POLR2A SP1
1055652
chr1 236319974 rs115891014 C T
POLR2A POU2F2 RUNX3 SPI1
1055653
chr1 236319981 rs139221814 C T
EBF1 POLR2A POU2F2 RUNX3 SPI1
1055654
chr1 236320124 rs149930193 C T
EBF1 EP300 POLR2A POU2F2 RUNX3 SPI1 SRF
1055655
chr1 236320240 rs79542199 G A
EP300 POLR2A POU2F2 RUNX3 SRF
1055656
Genes possibly regulated by vista5747[chr1:236319808-236320415]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 236139130 236228462 - NID1 ENSG00000116962.10 236228462 0.7 0.91 1973 8654
chr1 236305832 236385165 + GPR137B ENSG00000077585.9 236305832 0.82 1.0 1974 86024
Expression level of Genes
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miRNAs possibly regulated by vista5747[chr1:236319808-236320415]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results