EnhancerDB
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  3. vista5748[chr1:236323296-236323699]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5748[chr1:236323296-236323699]
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Tissue distribution of vista5748
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Transcription factor that possibly regulate vista5748[chr1:236323296-236323699]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236323021 236323347 EBF1 UCSC Txn Factor no Conserved 107886867
chr1 236323153 236323822 NFIC UCSC Txn Factor no Conserved 107886875
chr1 236323155 236323811 RUNX3 UCSC Txn Factor no Conserved 107886877
chr1 236323209 236324002 IKZF1 UCSC Txn Factor no Conserved 107886885
chr1 236323311 236323936 RELA UCSC Txn Factor no Conserved 107886893
chr1 236323310 236323322 CREB1 JASPAR yes 36407712
chr1 236323310 236323322 CREB1 JASPAR yes 118490934
chr1 236323317 236323323 MZF1 JASPAR yes 36407713
chr1 236323317 236323323 MZF1 JASPAR yes 118490935
chr1 236323322 236323343 REST JASPAR yes 36407714
chr1 236323322 236323343 REST JASPAR yes 118490936
chr1 236323323 236323342 REST JASPAR yes 36407715
chr1 236323323 236323342 REST JASPAR yes 118490937
chr1 236323324 236323339 MEF2C JASPAR yes 36407716
chr1 236323324 236323339 MEF2C JASPAR yes 118490938
chr1 236323333 236323347 NR2F1 JASPAR yes 36407717
chr1 236323333 236323347 NR2F1 JASPAR yes 118490939
chr1 236323348 236323356 TBX15 JASPAR yes 36407718
chr1 236323348 236323356 TBX15 JASPAR yes 118490940
chr1 236323349 236323354 SP1 TRANSFAC yes 36407719
chr1 236323349 236323354 SP1 TRANSFAC yes 118490941
chr1 236323360 236323374 SPI1 JASPAR yes 36407720
chr1 236323360 236323374 SPI1 JASPAR yes 118490942
chr1 236323377 236323398 IRF1 JASPAR yes 36407721
chr1 236323377 236323398 IRF1 JASPAR yes 118490943
chr1 236323379 236323394 IRF9 JASPAR yes 36407722
chr1 236323379 236323394 IRF9 JASPAR yes 118490944
chr1 236323380 236323394 IRF8 JASPAR yes 36407723
chr1 236323380 236323394 IRF8 JASPAR yes 118490945
chr1 236323381 236323395 SPIC JASPAR yes 36407724
chr1 236323381 236323395 SPIC JASPAR yes 118490946
chr1 236323381 236323399 IRF2 JASPAR yes 36407725
chr1 236323381 236323399 IRF2 JASPAR yes 118490947
chr1 236323382 236323394 IRF1 JASPAR yes 36407726
chr1 236323382 236323394 IRF1 JASPAR yes 118490948
chr1 236323390 236323395 ETS2 TRANSFAC yes 36407727
chr1 236323390 236323395 ETS2 TRANSFAC yes 118490949
chr1 236323390 236323400 TEAD1 JASPAR yes 36407728
chr1 236323390 236323400 TEAD4 JASPAR yes 36407729
chr1 236323390 236323400 TEAD1 JASPAR yes 118490950
chr1 236323390 236323400 TEAD4 JASPAR yes 118490951
chr1 236323401 236323405 YY1 TRANSFAC yes 36407730
chr1 236323401 236323405 YY1 TRANSFAC yes 118490952
chr1 236323409 236323415 HiNF-A TRANSFAC yes 36407731
chr1 236323409 236323415 HiNF-A TRANSFAC yes 118490953
chr1 236323419 236323423 YY1 TRANSFAC yes 36407732
chr1 236323419 236323423 YY1 TRANSFAC yes 118490954
chr1 236323433 236323449 SOX8 JASPAR yes 36407733
chr1 236323433 236323449 SOX8 JASPAR yes 118490955
chr1 236323465 236323486 ZNF263 JASPAR yes 36407734
chr1 236323465 236323486 ZNF263 JASPAR yes 118490956
chr1 236323472 236323487 PRDM1 JASPAR yes 36407735
chr1 236323472 236323487 PRDM1 JASPAR yes 118490957
chr1 236323477 236323492 TFAP2C JASPAR yes 36407736
chr1 236323477 236323492 TFAP2C JASPAR yes 118490958
chr1 236323497 236323518 ZNF263 JASPAR yes 36407737
chr1 236323497 236323518 ZNF263 JASPAR yes 118490959
chr1 236323501 236323507 SP1 TRANSFAC yes 36407738
chr1 236323501 236323507 SP1 TRANSFAC yes 118490960
chr1 236323501 236323511 SP1 JASPAR yes 36407739
chr1 236323501 236323511 SP1 JASPAR yes 118490961
chr1 236323505 236323526 ZNF263 JASPAR yes 36407740
chr1 236323505 236323526 ZNF263 JASPAR yes 118490962
chr1 236323509 236323513 NFE TRANSFAC yes 36407741
chr1 236323509 236323513 NFE TRANSFAC yes 118490963
chr1 236323536 236323549 NFKB2 JASPAR yes 36407742
chr1 236323536 236323549 NFKB2 JASPAR yes 118490964
chr1 236323537 236323548 NFKB1 JASPAR yes 36407743
chr1 236323537 236323548 NFKB1 JASPAR yes 118490965
chr1 236323538 236323543 ETS2 TRANSFAC yes 36407744
chr1 236323538 236323543 ETS2 TRANSFAC yes 118490966
chr1 236323547 236323558 NFKB1 JASPAR yes 36407745
chr1 236323547 236323558 NFKB1 JASPAR yes 118490967
chr1 236323548 236323558 REL JASPAR yes 36407746
chr1 236323548 236323558 REL JASPAR yes 118490968
chr1 236323557 236323572 FOXP1 JASPAR yes 36407747
chr1 236323557 236323572 FOXP1 JASPAR yes 118490969
chr1 236323558 236323569 FOXP2 JASPAR yes 36407748
chr1 236323558 236323569 FOXP2 JASPAR yes 118490970
chr1 236323560 236323568 FOXO3 JASPAR yes 36407749
chr1 236323560 236323568 FOXO3 JASPAR yes 118490971
chr1 236323560 236323571 FOXA1 JASPAR yes 36407750
chr1 236323560 236323571 FOXA1 JASPAR yes 118490972
chr1 236323575 236323596 ZNF263 JASPAR yes 36407751
chr1 236323575 236323596 ZNF263 JASPAR yes 118490973
chr1 236323578 236323599 ZNF263 JASPAR yes 36407752
chr1 236323578 236323599 ZNF263 JASPAR yes 118490974
chr1 236323584 236323605 ZNF263 JASPAR yes 36407753
chr1 236323584 236323605 ZNF263 JASPAR yes 118490975
chr1 236323585 236323590 ETS2 TRANSFAC yes 36407754
chr1 236323585 236323590 ETS2 TRANSFAC yes 118490976
chr1 236323585 236323593 EHF JASPAR yes 36407755
chr1 236323585 236323593 EHF JASPAR yes 118490977
chr1 236323585 236323606 ZNF263 JASPAR yes 36407756
chr1 236323585 236323606 ZNF263 JASPAR yes 118490978
chr1 236323587 236323608 ZNF263 JASPAR yes 36407757
chr1 236323587 236323608 ZNF263 JASPAR yes 118490979
chr1 236323590 236323611 ZNF263 JASPAR yes 36407758
chr1 236323590 236323611 ZNF263 JASPAR yes 118490980
chr1 236323591 236323606 PRDM1 JASPAR yes 36407759
chr1 236323591 236323606 PRDM1 JASPAR yes 118490981
chr1 236323592 236323598 MAZ TRANSFAC yes 36407760
chr1 236323592 236323598 MAZ TRANSFAC yes 118490982
chr1 236323592 236323603 E2F6 JASPAR yes 36407761
chr1 236323592 236323603 E2F6 JASPAR yes 118490983
chr1 236323596 236323609 ELF1 JASPAR yes 36407762
chr1 236323596 236323609 ELF1 JASPAR yes 118490984
chr1 236323599 236323609 GABPA JASPAR yes 36407763
chr1 236323599 236323609 GABPA JASPAR yes 118490985
chr1 236323599 236323610 FLI1 JASPAR yes 36407764
chr1 236323599 236323610 FLI1 JASPAR yes 118490986
chr1 236323600 236323605 ETS2 TRANSFAC yes 36407765
chr1 236323600 236323605 ETS2 TRANSFAC yes 118490987
chr1 236323600 236323608 FEV JASPAR yes 36407766
chr1 236323600 236323608 FEV JASPAR yes 118490988
chr1 236323601 236323608 SPI1 JASPAR yes 36407767
chr1 236323601 236323608 SPI1 JASPAR yes 118490989
chr1 236323606 236323626 PPARG JASPAR yes 36407768
chr1 236323606 236323626 PPARG JASPAR yes 118490990
chr1 236323614 236323618 YY1 TRANSFAC yes 36407769
chr1 236323614 236323618 YY1 TRANSFAC yes 118490991
chr1 236323644 236323650 MZF1 JASPAR yes 36407770
chr1 236323644 236323650 MZF1 JASPAR yes 118490992
chr1 236323652 236323664 NHLH1 JASPAR yes 36407771
chr1 236323652 236323664 NHLH1 JASPAR yes 118490993
chr1 236323653 236323663 NHLH1 JASPAR yes 36407772
chr1 236323653 236323663 NHLH1 JASPAR yes 118490994
chr1 236323660 236323670 NFKB1 JASPAR yes 36407773
chr1 236323660 236323670 NFKB1 JASPAR yes 118490995
chr1 236323680 236323690 ETV6 JASPAR yes 36407774
chr1 236323680 236323690 ETV6 JASPAR yes 118490996
chr1 236323691 236323695 H4TF2 TRANSFAC yes 36407775
chr1 236323691 236323695 H4TF2 TRANSFAC yes 118490997
chr1 236323695 236323703 MEIS2 JASPAR yes 36407776
chr1 236323695 236323703 MEIS3 JASPAR yes 36407777
chr1 236323695 236323703 MEIS2 JASPAR yes 118490998
chr1 236323695 236323703 MEIS3 JASPAR yes 118490999
chr1 236323696 236323700 NFE TRANSFAC yes 36407778
chr1 236323696 236323700 NFE TRANSFAC yes 118491000
SNP sites on vista5748[chr1:236323296-236323699]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236323314 rs76489655 G A
CREB1 EBF1 IKZF1 NFIC RELA RUNX3
1055702
chr1 236323388 rs566273321 C T
IKZF1 IRF1 IRF2 IRF8 IRF9 NFIC RELA RUNX3 SPIC
1055703
chr1 236323558 rs537874136 C T
FOXP1 FOXP2 IKZF1 NFIC NFKB1 REL RELA RUNX3
1055704
chr1 236323560 rs115421939 G A
FOXA1 FOXO3 FOXP1 FOXP2 IKZF1 NFIC RELA RUNX3
1055705
chr1 236323568 rs144900262 A C,G
FOXA1 FOXO3 FOXP1 FOXP2 IKZF1 NFIC RELA RUNX3
1055706
chr1 236323686 rs73121089 C T
ETV6 IKZF1 NFIC RELA RUNX3
1055707
Genes possibly regulated by vista5748[chr1:236323296-236323699]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 236139130 236228462 - NID1 ENSG00000116962.10 236228462 0.7 0.91 1973 5166
chr1 236305832 236385165 + GPR137B ENSG00000077585.9 236305832 0.82 1.0 1974 82536
Expression level of Genes
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miRNAs possibly regulated by vista5748[chr1:236323296-236323699]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results