EnhancerDB
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  3. vista575[chr1:17962245-17962730]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista575[chr1:17962245-17962730]
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Tissue distribution of vista575
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Transcription factor that possibly regulate vista575[chr1:17962245-17962730]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 17962246 17962250 NFE TRANSFAC yes 118241663
chr1 17962259 17962275 ZNF143 JASPAR yes 118241664
chr1 17962267 17962272 SP1 TRANSFAC yes 118241665
chr1 17962267 17962276 HIC2 JASPAR yes 118241666
chr1 17962270 17962274 LFA1 TRANSFAC yes 118241667
chr1 17962273 17962277 YY1 TRANSFAC yes 118241668
chr1 17962285 17962290 ETS2 TRANSFAC yes 118241669
chr1 17962322 17962327 ETS2 TRANSFAC yes 118241670
chr1 17962334 17962345 TFAP2A JASPAR yes 118241671
chr1 17962334 17962345 TFAP2B JASPAR yes 118241672
chr1 17962334 17962345 TFAP2C JASPAR yes 118241673
chr1 17962335 17962344 TFAP2A JASPAR yes 118241674
chr1 17962366 17962384 IRF2 JASPAR yes 118241675
chr1 17962367 17962388 IRF1 JASPAR yes 118241676
chr1 17962369 17962384 STAT2 JASPAR yes 118241677
chr1 17962370 17962384 STAT1 JASPAR yes 118241678
chr1 17962371 17962383 IRF1 JASPAR yes 118241679
chr1 17962376 17962386 ETV6 JASPAR yes 118241680
chr1 17962379 17962389 MZF1 JASPAR yes 118241681
chr1 17962387 17962391 NFE TRANSFAC yes 118241682
chr1 17962388 17962405 RXRA JASPAR yes 118241683
chr1 17962394 17962398 NFE TRANSFAC yes 118241684
chr1 17962428 17962441 HSF2 JASPAR yes 118241685
chr1 17962432 17962443 STAT3 JASPAR yes 118241686
chr1 17962454 17962465 CEBPB JASPAR yes 118241687
chr1 17962455 17962466 CEBPA JASPAR yes 118241688
chr1 17962478 17962497 PAX5 JASPAR yes 118241689
chr1 17962481 17962498 PAX1 JASPAR yes 118241690
chr1 17962481 17962498 PAX9 JASPAR yes 118241691
chr1 17962487 17962491 H4TF2 TRANSFAC yes 118241692
chr1 17962492 17962500 MEIS2 JASPAR yes 118241693
chr1 17962492 17962500 MEIS3 JASPAR yes 118241694
chr1 17962492 17962505 ZBTB18 JASPAR yes 118241695
chr1 17962493 17962505 PKNOX1 JASPAR yes 118241696
chr1 17962493 17962505 PKNOX2 JASPAR yes 118241697
chr1 17962493 17962505 TGIF1 JASPAR yes 118241698
chr1 17962493 17962505 TGIF2 JASPAR yes 118241699
chr1 17962494 17962504 MSC JASPAR yes 118241700
chr1 17962494 17962504 MYF6 JASPAR yes 118241701
chr1 17962494 17962504 NHLH1 JASPAR yes 118241702
chr1 17962494 17962504 TFAP4 JASPAR yes 118241703
chr1 17962501 17962510 HIC2 JASPAR yes 118241704
chr1 17962508 17962521 ZBTB18 JASPAR yes 118241705
chr1 17962518 17962522 NFE TRANSFAC yes 118241706
chr1 17962553 17962574 ZNF263 JASPAR yes 118241707
chr1 17962557 17962563 NFE2 TRANSFAC yes 118241708
chr1 17962560 17962572 HES5 JASPAR yes 118241709
chr1 17962560 17962572 HES7 JASPAR yes 118241710
chr1 17962561 17962571 BHLHE40 JASPAR yes 118241711
chr1 17962561 17962571 HEY1 JASPAR yes 118241712
chr1 17962561 17962571 HEY2 JASPAR yes 118241713
chr1 17962561 17962571 MAX JASPAR yes 118241714
chr1 17962561 17962571 MNT JASPAR yes 118241715
chr1 17962561 17962571 TFE3 JASPAR yes 118241716
chr1 17962561 17962571 TFEB JASPAR yes 118241717
chr1 17962562 17962569 USF1 JASPAR yes 118241718
chr1 17962562 17962572 MAX JASPAR yes 118241719
chr1 17962563 17962568 MYC TRANSFAC yes 118241720
chr1 17962563 17962568 USF1 TRANSFAC yes 118241721
chr1 17962563 17962568 USF2 TRANSFAC yes 118241722
chr1 17962569 17962577 EHF JASPAR yes 118241723
chr1 17962605 17962616 E2F6 JASPAR yes 118241724
chr1 17962609 17962624 ZIC3 JASPAR yes 118241725
chr1 17962610 17962621 E2F4 JASPAR yes 118241726
chr1 17962613 17962619 SP1 TRANSFAC yes 118241727
chr1 17962616 17962630 GLIS2 JASPAR yes 118241728
chr1 17962619 17962630 TFAP2A JASPAR yes 118241729
chr1 17962625 17962629 LFA1 TRANSFAC yes 118241730
chr1 17962635 17962640 ETS2 TRANSFAC yes 118241731
chr1 17962647 17962651 ESR1 TRANSFAC yes 118241732
chr1 17962689 17962702 NFKB1 JASPAR yes 118241733
SNP sites on vista575[chr1:17962245-17962730]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 17962267 rs371779610 C T
HIC2 SP1 ZNF143
120566
chr1 17962390 rs189105403 G A
NFE RXRA
120567
chr1 17962490 rs558542462 T C
H4TF2 PAX1 PAX5 PAX9
120568
chr1 17962567 rs139062372 G A,C
BHLHE40 HES5 HES7 HEY1 HEY2 MAX MNT MYC TFE3 TFEB USF1 USF2 ZNF263
120569
chr1 17962582 rs149874779 G A no 120570
chr1 17962635 rs574614094 G C
ETS2
120571
chr1 17962694 rs72648442 G A
NFKB1
120572
Genes possibly regulated by vista575[chr1:17962245-17962730]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 17866330 18024369 + ARHGEF10L ENSG00000074964.12 17866330 0.8 1.0 247 4085
Expression level of Genes
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miRNAs possibly regulated by vista575[chr1:17962245-17962730]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results