EnhancerDB
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  3. vista5755[chr1:236559628-236560010]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5755[chr1:236559628-236560010]
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Tissue distribution of vista5755
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Transcription factor that possibly regulate vista5755[chr1:236559628-236560010]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236559647 236559651 NFE TRANSFAC yes 118491101
chr1 236559653 236559657 TEAD2 TRANSFAC yes 118491102
chr1 236559655 236559658 MYB TRANSFAC yes 118491103
chr1 236559697 236559709 PBX1 JASPAR yes 118491104
chr1 236559707 236559711 NFE TRANSFAC yes 118491105
chr1 236559708 236559713 GATA2 JASPAR yes 118491106
chr1 236559726 236559736 NFKB1 JASPAR yes 118491107
chr1 236559740 236559746 TCF4 TRANSFAC yes 36414468
chr1 236559740 236559746 TCF4 TRANSFAC yes 118491108
chr1 236559752 236559760 FOXO3 JASPAR yes 36414469
chr1 236559752 236559760 FOXO3 JASPAR yes 118491109
chr1 236559756 236559772 SOX8 JASPAR yes 36414470
chr1 236559756 236559772 SOX8 JASPAR yes 118491110
chr1 236559785 236559789 TEAD2 TRANSFAC yes 36414471
chr1 236559785 236559789 TEAD2 TRANSFAC yes 118491111
chr1 236559787 236559790 MYB TRANSFAC yes 36414472
chr1 236559787 236559790 MYB TRANSFAC yes 118491112
chr1 236559789 236559799 BARHL2 JASPAR yes 36414473
chr1 236559789 236559799 BARHL2 JASPAR yes 118491113
chr1 236559796 236559804 GATA3 JASPAR yes 36414474
chr1 236559796 236559804 GATA3 JASPAR yes 118491114
chr1 236559812 236559816 YY1 TRANSFAC yes 36414475
chr1 236559812 236559816 YY1 TRANSFAC yes 118491115
chr1 236559817 236559821 YY1 TRANSFAC yes 36414476
chr1 236559817 236559821 YY1 TRANSFAC yes 118491116
chr1 236559830 236559841 NRF1 JASPAR yes 36414477
chr1 236559830 236559841 NRF1 JASPAR yes 118491117
chr1 236559831 236559835 LFA1 TRANSFAC yes 36414478
chr1 236559831 236559835 LFA1 TRANSFAC yes 118491118
chr1 236559831 236559843 INSM1 JASPAR yes 36414479
chr1 236559831 236559843 INSM1 JASPAR yes 118491119
chr1 236559836 236559841 SP1 TRANSFAC yes 36414480
chr1 236559836 236559841 SP1 TRANSFAC yes 118491120
chr1 236559897 236559912 ZIC4 JASPAR yes 36414481
chr1 236559897 236559912 ZIC4 JASPAR yes 118491121
chr1 236559898 236559912 ZIC1 JASPAR yes 36414482
chr1 236559898 236559912 ZIC1 JASPAR yes 118491122
chr1 236559901 236559910 SNAI2 JASPAR yes 36414483
chr1 236559901 236559910 SNAI2 JASPAR yes 118491123
chr1 236559901 236559911 FIGLA JASPAR yes 36414484
chr1 236559901 236559911 TCF3 JASPAR yes 36414485
chr1 236559901 236559911 FIGLA JASPAR yes 118491124
chr1 236559901 236559911 TCF3 JASPAR yes 118491125
chr1 236559908 236559912 ESR1 TRANSFAC yes 36414486
chr1 236559908 236559912 ESR1 TRANSFAC yes 118491126
chr1 236559934 236559943 HIC2 JASPAR yes 36414487
chr1 236559934 236559943 HIC2 JASPAR yes 118491127
chr1 236559934 236559944 NFIA JASPAR yes 36414488
chr1 236559934 236559944 NFIA JASPAR yes 118491128
chr1 236559936 236559942 NFIC JASPAR yes 36414489
chr1 236559936 236559942 NFIC JASPAR yes 118491129
chr1 236559943 236559963 RREB1 JASPAR yes 36414490
chr1 236559943 236559963 RREB1 JASPAR yes 118491130
chr1 236559946 236559952 YY1 JASPAR yes 36414491
chr1 236559946 236559952 YY1 JASPAR yes 118491131
chr1 236559948 236559968 RREB1 JASPAR yes 36414492
chr1 236559948 236559968 RREB1 JASPAR yes 118491132
chr1 236559954 236559966 INSM1 JASPAR yes 36414493
chr1 236559954 236559966 INSM1 JASPAR yes 118491133
chr1 236559964 236559979 STAT1 JASPAR yes 36414494
chr1 236559964 236559979 STAT1 JASPAR yes 118491134
chr1 236559966 236559977 STAT1 JASPAR yes 36414495
chr1 236559966 236559977 STAT3 JASPAR yes 36414496
chr1 236559966 236559977 STAT1 JASPAR yes 118491135
chr1 236559966 236559977 STAT3 JASPAR yes 118491136
chr1 236559974 236559988 TCF7L2 JASPAR yes 36414497
chr1 236559974 236559988 TCF7L2 JASPAR yes 118491137
chr1 236559974 236559989 LEF1 JASPAR yes 36414498
chr1 236559974 236559989 LEF1 JASPAR yes 118491138
chr1 236559978 236559984 TCF1 TRANSFAC yes 36414499
chr1 236559978 236559984 TCF1 TRANSFAC yes 118491139
chr1 236559995 236560010 FOXP1 JASPAR yes 36414500
chr1 236559995 236560010 FOXP1 JASPAR yes 118491140
SNP sites on vista5755[chr1:236559628-236560010]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236559791 rs551260023 C T
BARHL2
1056663
chr1 236559804 rs562699008 C T
GATA3
1056664
chr1 236559860 rs139707427 C T no 1056665
chr1 236559861 rs72753323 C T no 1056666
Genes possibly regulated by vista5755[chr1:236559628-236560010]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 236511562 236648214 + EDARADD ENSG00000186197.8 236511562 0.84 0.97 1976 51934
Expression level of Genes
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miRNAs possibly regulated by vista5755[chr1:236559628-236560010]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results