EnhancerDB
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  3. vista5757[chr1:236580668-236580890]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5757[chr1:236580668-236580890]
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Tissue distribution of vista5757
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Transcription factor that possibly regulate vista5757[chr1:236580668-236580890]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236580675 236580679 TEAD2 TRANSFAC yes 36416028
chr1 236580675 236580679 TEAD2 TRANSFAC yes 118491206
chr1 236580675 236580680 TBP TRANSFAC yes 36416029
chr1 236580675 236580680 TBP TRANSFAC yes 118491207
chr1 236580675 236580690 HNF1A JASPAR yes 36416030
chr1 236580675 236580690 HNF1A JASPAR yes 118491208
chr1 236580685 236580688 MYB TRANSFAC yes 36416031
chr1 236580685 236580688 MYB TRANSFAC yes 118491209
chr1 236580701 236580712 DUX4 JASPAR yes 36416032
chr1 236580701 236580712 DUX4 JASPAR yes 118491210
chr1 236580702 236580707 NFY TRANSFAC yes 36416033
chr1 236580702 236580707 NFY TRANSFAC yes 118491211
chr1 236580707 236580719 POU2F1 JASPAR yes 36416034
chr1 236580707 236580719 POU2F1 JASPAR yes 118491212
chr1 236580712 236580727 RUNX2 JASPAR yes 36416035
chr1 236580712 236580727 RUNX2 JASPAR yes 118491213
chr1 236580715 236580726 RUNX1 JASPAR yes 36416036
chr1 236580715 236580726 RUNX1 JASPAR yes 118491214
chr1 236580716 236580726 RUNX3 JASPAR yes 36416037
chr1 236580716 236580726 RUNX3 JASPAR yes 118491215
chr1 236580730 236580742 NHLH1 JASPAR yes 36416038
chr1 236580730 236580742 NHLH1 JASPAR yes 118491216
chr1 236580731 236580741 NHLH1 JASPAR yes 36416039
chr1 236580731 236580741 TFAP4 JASPAR yes 36416040
chr1 236580731 236580741 NHLH1 JASPAR yes 118491217
chr1 236580731 236580741 TFAP4 JASPAR yes 118491218
chr1 236580752 236580763 PHOX2A JASPAR yes 36416041
chr1 236580752 236580763 PROP1 JASPAR yes 36416042
chr1 236580752 236580763 PHOX2A JASPAR yes 118491219
chr1 236580752 236580763 PROP1 JASPAR yes 118491220
chr1 236580758 236580762 YY1 TRANSFAC yes 36416043
chr1 236580758 236580762 YY1 TRANSFAC yes 118491221
chr1 236580758 236580776 MAFF JASPAR yes 36416044
chr1 236580758 236580776 MAFF JASPAR yes 118491222
chr1 236580759 236580774 MAFK JASPAR yes 36416045
chr1 236580759 236580774 MAFK JASPAR yes 118491223
chr1 236580766 236580776 NEUROG2 JASPAR yes 36416046
chr1 236580766 236580776 NEUROG2 JASPAR yes 118491224
chr1 236580766 236580778 TAL1 JASPAR yes 36416047
chr1 236580766 236580778 TAL1 JASPAR yes 118491225
chr1 236580788 236580800 FOXC2 JASPAR yes 36416048
chr1 236580788 236580800 FOXC2 JASPAR yes 118491226
chr1 236580796 236580800 TEAD2 TRANSFAC yes 36416049
chr1 236580796 236580800 TEAD2 TRANSFAC yes 118491227
chr1 236580796 236580801 TBP TRANSFAC yes 36416050
chr1 236580796 236580801 TBP TRANSFAC yes 118491228
chr1 236580796 236580802 TMF TRANSFAC yes 36416051
chr1 236580796 236580802 TMF TRANSFAC yes 118491229
chr1 236580806 236580821 FOXP1 JASPAR yes 36416052
chr1 236580806 236580821 FOXP1 JASPAR yes 118491230
chr1 236580807 236580818 FOXP2 JASPAR yes 36416053
chr1 236580807 236580818 FOXP2 JASPAR yes 118491231
chr1 236580809 236580820 FOXA1 JASPAR yes 36416054
chr1 236580809 236580820 FOXA1 JASPAR yes 118491232
chr1 236580821 236580825 LFA1 TRANSFAC yes 36416055
chr1 236580821 236580825 LFA1 TRANSFAC yes 118491233
chr1 236580826 236580840 SPI1 JASPAR yes 36416056
chr1 236580826 236580840 SPI1 JASPAR yes 118491234
chr1 236580873 236580893 RREB1 JASPAR yes 36416057
chr1 236580873 236580893 RREB1 JASPAR yes 118491235
chr1 236580874 236580886 ZBTB7B JASPAR yes 36416058
chr1 236580874 236580886 ZBTB7B JASPAR yes 118491236
chr1 236580878 236580898 RREB1 JASPAR yes 36416059
chr1 236580878 236580898 RREB1 JASPAR yes 118491237
chr1 236580884 236580888 YY1 TRANSFAC yes 36416060
chr1 236580884 236580888 YY1 TRANSFAC yes 118491238
SNP sites on vista5757[chr1:236580668-236580890]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236580728 rs143171199 A G no 1056811
chr1 236580751 rs114128735 T C no 1056812
chr1 236580885 rs74454464 C G,T
RREB1 YY1 ZBTB7B
1056813
Genes possibly regulated by vista5757[chr1:236580668-236580890]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 236511562 236648214 + EDARADD ENSG00000186197.8 236511562 0.84 0.97 1976 30894
Expression level of Genes
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miRNAs possibly regulated by vista5757[chr1:236580668-236580890]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results