EnhancerDB
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  3. vista5761[chr1:236853510-236853749]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5761[chr1:236853510-236853749]
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Tissue distribution of vista5761
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Transcription factor that possibly regulate vista5761[chr1:236853510-236853749]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 236853518 236853530 ZBTB7A JASPAR yes 71163587
chr1 236853518 236853530 ZBTB7A JASPAR yes 118491336
chr1 236853519 236853524 SP1 TRANSFAC yes 71163588
chr1 236853519 236853524 SP1 TRANSFAC yes 118491337
chr1 236853532 236853542 GSC2 JASPAR yes 71163589
chr1 236853532 236853542 GSC2 JASPAR yes 118491338
chr1 236853533 236853541 OTX1 JASPAR yes 71163590
chr1 236853533 236853541 OTX2 JASPAR yes 71163591
chr1 236853533 236853541 OTX1 JASPAR yes 118491339
chr1 236853533 236853541 OTX2 JASPAR yes 118491340
chr1 236853560 236853580 PPARG JASPAR yes 71163592
chr1 236853560 236853580 PPARG JASPAR yes 118491341
chr1 236853567 236853583 SOX4 JASPAR yes 71163593
chr1 236853567 236853583 SOX4 JASPAR yes 118491342
chr1 236853570 236853581 ESRRA JASPAR yes 71163594
chr1 236853570 236853581 ESRRA JASPAR yes 118491343
chr1 236853577 236853592 RUNX2 JASPAR yes 71163595
chr1 236853577 236853592 RUNX2 JASPAR yes 118491344
chr1 236853583 236853592 THAP1 JASPAR yes 71163596
chr1 236853583 236853592 THAP1 JASPAR yes 118491345
chr1 236853586 236853590 LFA1 TRANSFAC yes 71163597
chr1 236853586 236853590 LFA1 TRANSFAC yes 118491346
chr1 236853589 236853601 NHLH1 JASPAR yes 71163598
chr1 236853589 236853601 NHLH1 JASPAR yes 118491347
chr1 236853590 236853600 MSC JASPAR yes 71163599
chr1 236853590 236853600 NHLH1 JASPAR yes 71163600
chr1 236853590 236853600 MSC JASPAR yes 118491348
chr1 236853590 236853600 NHLH1 JASPAR yes 118491349
chr1 236853590 236853608 MAFF JASPAR yes 71163601
chr1 236853590 236853608 MAFF JASPAR yes 118491350
chr1 236853592 236853607 MAFK JASPAR yes 71163602
chr1 236853592 236853607 MAFK JASPAR yes 118491351
chr1 236853622 236853632 GABPA JASPAR yes 71163603
chr1 236853622 236853632 GABPA JASPAR yes 118491352
chr1 236853622 236853635 ELF1 JASPAR yes 71163604
chr1 236853622 236853635 ELF1 JASPAR yes 118491353
chr1 236853623 236853637 E2F7 JASPAR yes 71163605
chr1 236853623 236853637 E2F7 JASPAR yes 118491354
chr1 236853635 236853644 JDP2 JASPAR yes 71163606
chr1 236853635 236853644 JDP2 JASPAR yes 118491355
chr1 236853676 236853684 HOXA5 JASPAR yes 71163607
chr1 236853676 236853684 HOXA5 JASPAR yes 118491356
chr1 236853678 236853686 BARX1 JASPAR yes 71163608
chr1 236853678 236853686 BARX1 JASPAR yes 118491357
chr1 236853678 236853687 VENTX JASPAR yes 71163609
chr1 236853678 236853687 VENTX JASPAR yes 118491358
chr1 236853689 236853704 HNF1A JASPAR yes 71163610
chr1 236853689 236853704 HNF1A JASPAR yes 118491359
chr1 236853690 236853703 HNF1B JASPAR yes 71163611
chr1 236853690 236853703 HNF1B JASPAR yes 118491360
chr1 236853691 236853695 H1TF2 TRANSFAC yes 71163612
chr1 236853691 236853695 NFE TRANSFAC yes 71163613
chr1 236853691 236853695 SRF TRANSFAC yes 71163614
chr1 236853691 236853695 H1TF2 TRANSFAC yes 118491361
chr1 236853691 236853695 NFE TRANSFAC yes 118491362
chr1 236853691 236853695 SRF TRANSFAC yes 118491363
chr1 236853691 236853703 HNF1B JASPAR yes 71163615
chr1 236853691 236853703 HNF1B JASPAR yes 118491364
chr1 236853699 236853702 MYB TRANSFAC yes 71163616
chr1 236853699 236853702 MYB TRANSFAC yes 118491365
chr1 236853713 236853725 TGIF1 JASPAR yes 71163617
chr1 236853713 236853725 TGIF1 JASPAR yes 118491366
chr1 236853716 236853720 YY1 TRANSFAC yes 118491367
SNP sites on vista5761[chr1:236853510-236853749]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 236853533 rs80157519 T C
GSC2 OTX1 OTX2
1058576
chr1 236853535 rs565028445 G A
GSC2 OTX1 OTX2
1058577
chr1 236853550 rs114311880 C G no 1058578
chr1 236853649 rs75427933 T C no 1058579
Genes possibly regulated by vista5761[chr1:236853510-236853749]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 236712305 236767804 - HEATR1 ENSG00000119285.6 236767804 0.71 0.99 1978 14294
chr1 236849754 236927931 + ACTN2 ENSG00000077522.8 236849754 1.0 1.0 1979 96244
Expression level of Genes
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miRNAs possibly regulated by vista5761[chr1:236853510-236853749]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results