EnhancerDB
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  3. vista5791[chr1:239524689-239525075]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5791[chr1:239524689-239525075]
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Tissue distribution of vista5791
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Transcription factor that possibly regulate vista5791[chr1:239524689-239525075]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 239524830 239525117 FOS UCSC Txn Factor no Conserved 107887079
chr1 239524735 239524748 SMAD2 JASPAR yes 118492878
chr1 239524739 239524743 NFE TRANSFAC yes 118492879
chr1 239524750 239524760 MZF1 JASPAR yes 118492880
chr1 239524764 239524774 MZF1 JASPAR yes 118492881
chr1 239524767 239524772 TFAP2A TRANSFAC yes 118492882
chr1 239524767 239524773 MZF1 JASPAR yes 118492883
chr1 239524770 239524786 POU4F3 JASPAR yes 118492884
chr1 239524772 239524786 POU4F1 JASPAR yes 118492885
chr1 239524796 239524806 SREBF1 JASPAR yes 118492886
chr1 239524796 239524806 SREBF2 JASPAR yes 118492887
chr1 239524802 239524811 THAP1 JASPAR yes 118492888
chr1 239524803 239524809 YY1 JASPAR yes 118492889
chr1 239524817 239524827 HOXB13 JASPAR yes 118492890
chr1 239524817 239524827 HOXD13 JASPAR yes 118492891
chr1 239524824 239524839 RUNX2 JASPAR yes 118492892
chr1 239524825 239524832 PEA3 TRANSFAC yes 118492893
chr1 239524884 239524896 HNF1B JASPAR yes 118492894
chr1 239524884 239524896 MEF2A JASPAR yes 118492895
chr1 239524886 239524890 TEAD2 TRANSFAC yes 118492896
chr1 239524886 239524896 ALX3 JASPAR yes 118492897
chr1 239524886 239524896 HOXB2 JASPAR yes 118492898
chr1 239524886 239524896 MNX1 JASPAR yes 118492899
chr1 239524887 239524895 LMX1A JASPAR yes 118492900
chr1 239524887 239524895 LMX1B JASPAR yes 118492901
chr1 239524887 239524895 NKX6-1 JASPAR yes 118492902
chr1 239524887 239524895 NKX6-2 JASPAR yes 118492903
chr1 239524887 239524895 VAX1 JASPAR yes 118492904
chr1 239524887 239524895 VAX2 JASPAR yes 118492905
chr1 239524887 239524895 VSX1 JASPAR yes 118492906
chr1 239524887 239524895 VSX2 JASPAR yes 118492907
chr1 239524887 239524897 POU6F2 JASPAR yes 118492908
chr1 239524892 239524895 MYB TRANSFAC yes 118492909
chr1 239524901 239524912 NFE2L2 JASPAR yes 118492910
chr1 239524913 239524917 ESR1 TRANSFAC yes 118492911
chr1 239524916 239524920 YY1 TRANSFAC yes 118492912
chr1 239524922 239524936 JUN JASPAR yes 118492913
chr1 239524925 239524936 FOSL2 JASPAR yes 118492914
chr1 239524925 239524936 JUNB JASPAR yes 118492915
chr1 239524926 239524937 FOS JASPAR yes 118492916
chr1 239524926 239524937 FOSL1 JASPAR yes 118492917
chr1 239524926 239524937 JUND JASPAR yes 118492918
chr1 239524926 239524937 NFE2 JASPAR yes 118492919
chr1 239524927 239524936 JDP2 JASPAR yes 118492920
chr1 239524927 239524941 JUN JASPAR yes 118492921
chr1 239524942 239524952 TBX21 JASPAR yes 118492922
chr1 239524942 239524953 TBX20 JASPAR yes 118492923
chr1 239524943 239524953 TBR1 JASPAR yes 118492924
chr1 239524974 239524985 E2F6 JASPAR yes 118492925
chr1 239525025 239525036 USF1 JASPAR yes 118492926
chr1 239525025 239525036 USF2 JASPAR yes 118492927
chr1 239525025 239525039 JUN JASPAR yes 118492928
chr1 239525028 239525039 FOSL2 JASPAR yes 118492929
chr1 239525028 239525039 JUNB JASPAR yes 118492930
chr1 239525029 239525040 FOS JASPAR yes 118492931
chr1 239525029 239525040 FOSL1 JASPAR yes 118492932
chr1 239525029 239525040 JUND JASPAR yes 118492933
chr1 239525030 239525037 JUN TRANSFAC yes 118492934
chr1 239525030 239525044 JUN JASPAR yes 118492935
chr1 239525057 239525071 PAX6 JASPAR yes 118492936
chr1 239525060 239525074 STAT1 JASPAR yes 118492937
chr1 239525066 239525070 YY1 TRANSFAC yes 118492938
SNP sites on vista5791[chr1:239524689-239525075]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 239524723 rs78474551 C T no 1067940
chr1 239524781 rs74149041 A G
POU4F1 POU4F3
1067941
chr1 239524829 rs142941887 G T
PEA3 RUNX2
1067942
chr1 239524932 rs147239791 T C
FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND NFE2
1067943
Genes possibly regulated by vista5791[chr1:239524689-239525075]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 239549865 240078750 + CHRM3 ENSG00000133019.7 239549865 0.94 0.98 1985 75210
Expression level of Genes
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miRNAs possibly regulated by vista5791[chr1:239524689-239525075]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results