EnhancerDB
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  3. vista57987[chr8:479972-480137]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista57987[chr8:479972-480137]
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Tissue distribution of vista57987
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Transcription factor that possibly regulate vista57987[chr8:479972-480137]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr8 479967 479988 ZNF263 JASPAR yes 42747585
chr8 479967 479988 ZNF263 JASPAR yes 68304519
chr8 480000 480012 POU2F1 JASPAR yes 42747586
chr8 480000 480012 POU2F1 JASPAR yes 68304520
chr8 480000 480013 POU3F3 JASPAR yes 42747587
chr8 480000 480013 POU3F3 JASPAR yes 68304521
chr8 480000 480014 POU1F1 JASPAR yes 42747588
chr8 480000 480014 POU1F1 JASPAR yes 68304522
chr8 480001 480013 POU3F1 JASPAR yes 42747589
chr8 480001 480013 POU3F1 JASPAR yes 68304523
chr8 480001 480014 POU2F2 JASPAR yes 42747590
chr8 480001 480014 POU2F2 JASPAR yes 68304524
chr8 480002 480010 FOXL1 JASPAR yes 42747591
chr8 480002 480010 FOXL1 JASPAR yes 68304525
chr8 480002 480011 POU3F4 JASPAR yes 42747592
chr8 480002 480011 POU3F4 JASPAR yes 68304526
chr8 480012 480016 H4TF2 TRANSFAC yes 42747593
chr8 480012 480016 H4TF2 TRANSFAC yes 68304527
chr8 480027 480038 CDX2 JASPAR yes 42747594
chr8 480027 480038 CDX2 JASPAR yes 68304528
chr8 480029 480038 CDX1 JASPAR yes 42747595
chr8 480029 480038 CDX1 JASPAR yes 68304529
chr8 480037 480048 TFAP2B JASPAR yes 42747596
chr8 480037 480048 TFAP2C JASPAR yes 42747597
chr8 480037 480048 TFAP2B JASPAR yes 68304530
chr8 480037 480048 TFAP2C JASPAR yes 68304531
chr8 480046 480067 IRF1 JASPAR yes 42747598
chr8 480046 480067 IRF1 JASPAR yes 68304532
chr8 480047 480068 IRF1 JASPAR yes 42747599
chr8 480047 480068 IRF1 JASPAR yes 68304533
chr8 480048 480063 PRDM1 JASPAR yes 42747600
chr8 480048 480063 STAT2 JASPAR yes 42747601
chr8 480048 480063 PRDM1 JASPAR yes 68304534
chr8 480048 480063 STAT2 JASPAR yes 68304535
chr8 480049 480064 PRDM1 JASPAR yes 42747602
chr8 480049 480064 PRDM1 JASPAR yes 68304536
chr8 480051 480063 IRF1 JASPAR yes 42747603
chr8 480051 480063 IRF1 JASPAR yes 68304537
chr8 480051 480065 IRF7 JASPAR yes 42747604
chr8 480051 480065 IRF7 JASPAR yes 68304538
chr8 480053 480074 IRF1 JASPAR yes 42747605
chr8 480053 480074 IRF1 JASPAR yes 68304539
chr8 480055 480070 STAT2 JASPAR yes 42747606
chr8 480055 480070 STAT2 JASPAR yes 68304540
chr8 480056 480060 YY1 TRANSFAC yes 42747607
chr8 480056 480060 YY1 TRANSFAC yes 68304541
chr8 480059 480074 FOXP1 JASPAR yes 42747608
chr8 480059 480074 FOXP1 JASPAR yes 68304542
chr8 480073 480086 DUXA JASPAR yes 42747609
chr8 480073 480086 DUXA JASPAR yes 68304543
chr8 480074 480085 DUX4 JASPAR yes 42747610
chr8 480074 480085 DUX4 JASPAR yes 68304544
chr8 480087 480100 SCRT2 JASPAR yes 42747611
chr8 480087 480100 SCRT2 JASPAR yes 68304545
chr8 480115 480129 RORA JASPAR yes 42747612
chr8 480115 480129 RORA JASPAR yes 68304546
chr8 480119 480137 MAFF JASPAR yes 42747613
chr8 480119 480137 MAFF JASPAR yes 68304547
chr8 480120 480135 MAFK JASPAR yes 42747614
chr8 480120 480135 MAFK JASPAR yes 68304548
chr8 480121 480127 ESR1 TRANSFAC yes 42747615
chr8 480121 480127 ESR1 TRANSFAC yes 68304549
chr8 480123 480127 ESR1 TRANSFAC yes 42747616
chr8 480123 480127 ESR1 TRANSFAC yes 68304550
chr8 480124 480135 NRL JASPAR yes 42747617
chr8 480124 480135 NRL JASPAR yes 68304551
chr8 480132 480141 PITX3 JASPAR yes 42747618
chr8 480132 480141 PITX3 JASPAR yes 68304552
chr8 480132 480142 GSC2 JASPAR yes 42747619
chr8 480132 480142 GSC JASPAR yes 42747620
chr8 480132 480142 GSC2 JASPAR yes 68304553
chr8 480132 480142 GSC JASPAR yes 68304554
chr8 480133 480141 OTX1 JASPAR yes 42747621
chr8 480133 480141 OTX2 JASPAR yes 42747622
chr8 480133 480141 RHOXF1 JASPAR yes 42747623
chr8 480133 480141 OTX1 JASPAR yes 68304555
chr8 480133 480141 OTX2 JASPAR yes 68304556
chr8 480133 480141 RHOXF1 JASPAR yes 68304557
SNP sites on vista57987[chr8:479972-480137]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr8 480023 rs570132733 A G no 10221891
chr8 480043 rs192891092 T C
TFAP2B TFAP2C
10221892
chr8 480051 rs145104221 ACTTTTC A
IRF1 IRF7 PRDM1 STAT2
10221893
chr8 480052 rs557959489 C A
IRF1 IRF7 PRDM1 STAT2
10221894
chr8 480076 rs151246984 G C
DUX4 DUXA
10221895
chr8 480079 rs1584361 G C
DUX4 DUXA
10221896
chr8 480106 rs78141699 G A no 10221897
Genes possibly regulated by vista57987[chr8:479972-480137]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr8 439803 495781 - TDRP ENSG00000180190.7 495781 0.79 0.91 8068 84356
Expression level of Genes
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miRNAs possibly regulated by vista57987[chr8:479972-480137]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results