EnhancerDB
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  3. vista5805[chr1:240476321-240476487]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5805[chr1:240476321-240476487]
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Tissue distribution of vista5805
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Transcription factor that possibly regulate vista5805[chr1:240476321-240476487]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 240476193 240476551 EP300 UCSC Txn Factor no Conserved 107887222
chr1 240476214 240476538 TCF12 UCSC Txn Factor no Conserved 107887228
chr1 240476257 240476585 FOSL2 UCSC Txn Factor no Conserved 107887233
chr1 240476264 240476493 CEBPB UCSC Txn Factor no Conserved 107887235
chr1 240476311 240476561 FOS UCSC Txn Factor no Conserved 107887240
chr1 240476345 240476354 PITX3 JASPAR yes 36560272
chr1 240476345 240476354 PITX3 JASPAR yes 118493548
chr1 240476345 240476355 GSC2 JASPAR yes 36560273
chr1 240476345 240476355 GSC JASPAR yes 36560274
chr1 240476345 240476355 GSC2 JASPAR yes 118493549
chr1 240476345 240476355 GSC JASPAR yes 118493550
chr1 240476346 240476354 OTX1 JASPAR yes 36560275
chr1 240476346 240476354 OTX2 JASPAR yes 36560276
chr1 240476346 240476354 RHOXF1 JASPAR yes 36560277
chr1 240476346 240476354 OTX1 JASPAR yes 118493551
chr1 240476346 240476354 OTX2 JASPAR yes 118493552
chr1 240476346 240476354 RHOXF1 JASPAR yes 118493553
chr1 240476348 240476362 EBF1 JASPAR yes 36560278
chr1 240476348 240476362 EBF1 JASPAR yes 118493554
chr1 240476354 240476364 TEAD1 JASPAR yes 36560279
chr1 240476354 240476364 TEAD4 JASPAR yes 36560280
chr1 240476354 240476364 TEAD1 JASPAR yes 118493555
chr1 240476354 240476364 TEAD4 JASPAR yes 118493556
chr1 240476362 240476373 NFE2L2 JASPAR yes 36560281
chr1 240476362 240476373 NFE2L2 JASPAR yes 118493557
chr1 240476370 240476380 ERF JASPAR yes 36560282
chr1 240476370 240476380 ERF JASPAR yes 118493558
chr1 240476371 240476378 SPI1 JASPAR yes 36560283
chr1 240476371 240476378 SPI1 JASPAR yes 118493559
chr1 240476377 240476388 CEBPB JASPAR yes 36560284
chr1 240476377 240476388 CEBPB JASPAR yes 118493560
chr1 240476377 240476390 ATF4 JASPAR yes 36560285
chr1 240476377 240476390 ATF4 JASPAR yes 118493561
chr1 240476378 240476389 CEBPA JASPAR yes 36560286
chr1 240476378 240476389 CEBPA JASPAR yes 118493562
chr1 240476385 240476389 YY1 TRANSFAC yes 36560287
chr1 240476385 240476389 YY1 TRANSFAC yes 118493563
chr1 240476409 240476418 NKX3-2 JASPAR yes 36560288
chr1 240476409 240476418 NKX3-2 JASPAR yes 118493564
chr1 240476411 240476425 SPIC JASPAR yes 36560289
chr1 240476411 240476425 SPIC JASPAR yes 118493565
chr1 240476449 240476453 NFE TRANSFAC yes 36560290
chr1 240476449 240476453 NFE TRANSFAC yes 118493566
chr1 240476462 240476473 NFE2 JASPAR yes 36560291
chr1 240476462 240476473 NFE2 JASPAR yes 118493567
SNP sites on vista5805[chr1:240476321-240476487]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 240476364 rs191975757 G T
CEBPB EP300 FOS FOSL2 NFE2L2 TCF12 TEAD1 TEAD4
1071658
chr1 240476379 rs4434829 A C
ATF4 CEBPA CEBPB EP300 ERF FOS FOSL2 TCF12
1071659
chr1 240476387 rs75567207 A G
ATF4 CEBPA CEBPB EP300 FOS FOSL2 TCF12 YY1
1071660
chr1 240476471 rs4457561 G A
CEBPB EP300 FOS FOSL2 NFE2 TCF12
1071661
Genes possibly regulated by vista5805[chr1:240476321-240476487]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5805[chr1:240476321-240476487]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results