EnhancerDB
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  3. vista5809[chr1:240783291-240783489]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5809[chr1:240783291-240783489]
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Tissue distribution of vista5809
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Transcription factor that possibly regulate vista5809[chr1:240783291-240783489]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 240783317 240783323 ETS1 JASPAR yes 36574281
chr1 240783317 240783323 SPI1 JASPAR yes 36574282
chr1 240783317 240783323 ETS1 JASPAR yes 118493649
chr1 240783317 240783323 SPI1 JASPAR yes 118493650
chr1 240783320 240783334 IRF7 JASPAR yes 36574283
chr1 240783320 240783334 IRF7 JASPAR yes 118493651
chr1 240783350 240783358 MEIS3 JASPAR yes 36574284
chr1 240783350 240783358 MEIS3 JASPAR yes 118493652
chr1 240783360 240783370 MSC JASPAR yes 36574285
chr1 240783360 240783370 MSC JASPAR yes 118493653
chr1 240783387 240783392 SP1 TRANSFAC yes 36574286
chr1 240783387 240783392 SP1 TRANSFAC yes 118493654
chr1 240783387 240783393 SP1 TRANSFAC yes 36574287
chr1 240783387 240783393 SP1 TRANSFAC yes 118493655
chr1 240783409 240783413 NFE TRANSFAC yes 36574288
chr1 240783409 240783413 NFE TRANSFAC yes 118493656
chr1 240783435 240783446 NFKB1 JASPAR yes 36574289
chr1 240783435 240783446 NFKB1 JASPAR yes 118493657
chr1 240783443 240783449 MZF1 JASPAR yes 36574290
chr1 240783443 240783449 MZF1 JASPAR yes 118493658
chr1 240783444 240783456 NHLH1 JASPAR yes 36574291
chr1 240783444 240783456 NHLH1 JASPAR yes 118493659
chr1 240783445 240783455 TFAP4 JASPAR yes 36574292
chr1 240783445 240783455 TFAP4 JASPAR yes 118493660
chr1 240783445 240783457 TAL1 JASPAR yes 36574293
chr1 240783445 240783457 TAL1 JASPAR yes 118493661
chr1 240783457 240783463 SOX10 JASPAR yes 36574294
chr1 240783457 240783463 SOX10 JASPAR yes 118493662
chr1 240783462 240783467 TFAP2A TRANSFAC yes 36574295
chr1 240783462 240783467 TFAP2A TRANSFAC yes 118493663
chr1 240783462 240783468 MZF1 JASPAR yes 36574296
chr1 240783462 240783468 MZF1 JASPAR yes 118493664
chr1 240783464 240783474 NFKB1 JASPAR yes 36574297
chr1 240783464 240783474 NFKB1 JASPAR yes 118493665
chr1 240783464 240783475 NFKB1 JASPAR yes 36574298
chr1 240783464 240783475 NFKB1 JASPAR yes 118493666
chr1 240783477 240783488 NFE2 JASPAR yes 36574299
chr1 240783477 240783488 NFE2 JASPAR yes 118493667
chr1 240783478 240783487 JDP2 JASPAR yes 36574300
chr1 240783478 240783487 JDP2 JASPAR yes 118493668
chr1 240783479 240783490 BATF JASPAR yes 36574301
chr1 240783479 240783490 BATF JASPAR yes 118493669
chr1 240783484 240783488 YY1 TRANSFAC yes 36574302
chr1 240783484 240783488 YY1 TRANSFAC yes 118493670
SNP sites on vista5809[chr1:240783291-240783489]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 240783340 rs36120878 C T no 1073059
Genes possibly regulated by vista5809[chr1:240783291-240783489]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 240652873 240775449 - GREM2 ENSG00000180875.4 240775449 0.88 0.98 1988 92158
Expression level of Genes
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miRNAs possibly regulated by vista5809[chr1:240783291-240783489]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results