EnhancerDB
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  3. vista58213[chr8:11001237-11001609]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista58213[chr8:11001237-11001609]
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Tissue distribution of vista58213
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Transcription factor that possibly regulate vista58213[chr8:11001237-11001609]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr8 11001246 11001250 H4TF2 TRANSFAC yes 68314765
chr8 11001256 11001270 PLAG1 JASPAR yes 68314766
chr8 11001257 11001271 PLAG1 JASPAR yes 68314767
chr8 11001265 11001278 NFKB1 JASPAR yes 68314768
chr8 11001265 11001278 NFKB2 JASPAR yes 68314769
chr8 11001266 11001276 NFKB1 JASPAR yes 68314770
chr8 11001281 11001291 GSC2 JASPAR yes 68314771
chr8 11001282 11001290 OTX1 JASPAR yes 68314772
chr8 11001323 11001326 MYB TRANSFAC yes 68314773
chr8 11001342 11001356 BATF3 JASPAR yes 68314774
chr8 11001356 11001374 NR3C1 JASPAR yes 68314775
chr8 11001359 11001373 ONECUT1 JASPAR yes 68314776
chr8 11001359 11001373 ONECUT2 JASPAR yes 68314777
chr8 11001359 11001373 ONECUT3 JASPAR yes 68314778
chr8 11001360 11001370 PAX3 JASPAR yes 68314779
chr8 11001360 11001370 PAX7 JASPAR yes 68314780
chr8 11001416 11001431 FOXP1 JASPAR yes 68314781
chr8 11001417 11001428 FOXP2 JASPAR yes 68314782
chr8 11001439 11001444 ETS2 TRANSFAC yes 68314783
chr8 11001469 11001475 SOX10 JASPAR yes 68314784
chr8 11001482 11001492 REL JASPAR yes 68314785
chr8 11001482 11001493 NFKB1 JASPAR yes 68314786
chr8 11001488 11001495 SPIB JASPAR yes 68314787
chr8 11001504 11001518 EBF1 JASPAR yes 68314788
chr8 11001516 11001527 E2F6 JASPAR yes 68314789
chr8 11001536 11001549 SMAD2 JASPAR yes 68314790
chr8 11001551 11001559 RHOXF1 JASPAR yes 68314791
chr8 11001551 11001560 PITX3 JASPAR yes 68314792
chr8 11001559 11001573 GLIS2 JASPAR yes 68314793
chr8 11001559 11001573 GLIS3 JASPAR yes 68314794
chr8 11001571 11001585 RORA JASPAR yes 68314795
chr8 11001572 11001582 RORA JASPAR yes 68314796
chr8 11001582 11001585 MYB TRANSFAC yes 68314797
chr8 11001586 11001596 HMBOX1 JASPAR yes 68314798
chr8 11001604 11001608 H4TF2 TRANSFAC yes 68314799
SNP sites on vista58213[chr8:11001237-11001609]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr8 11001301 rs7834295 T G no 10280585
chr8 11001307 rs112082679 G A no 10280586
chr8 11001383 rs113284210 G A no 10280587
chr8 11001403 rs568306318 C G,T no 10280588
chr8 11001418 rs535362120 G A
FOXP1 FOXP2
10280589
chr8 11001475 rs569071029 T C
SOX10
10280590
chr8 11001479 rs189670325 C G no 10280591
chr8 11001503 rs541038902 T G no 10280592
chr8 11001507 rs111545338 T C
EBF1
10280593
chr8 11001514 rs7018157 G T
EBF1
10280594
chr8 11001561 rs562309578 A AC
GLIS2 GLIS3
10280595
chr8 11001562 rs150325575 C T
GLIS2 GLIS3
10280596
Genes possibly regulated by vista58213[chr8:11001237-11001609]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr8 10753555 11058875 - XKR6 ENSG00000171044.6 11058875 0.75 0.98 8119 42734
chr8 10983980 10987745 - AF131215.5 ENSG00000215346.3 10987745 0.9 0.99 8120 86508
Expression level of Genes
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miRNAs possibly regulated by vista58213[chr8:11001237-11001609]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results