EnhancerDB
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  3. vista58251[chr8:12548564-12548926]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista58251[chr8:12548564-12548926]
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Tissue distribution of vista58251
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Transcription factor that possibly regulate vista58251[chr8:12548564-12548926]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr8 12548577 12548585 MEIS2 JASPAR yes 68316728
chr8 12548578 12548582 NFE TRANSFAC yes 68316729
chr8 12548578 12548585 MEIS1 JASPAR yes 68316730
chr8 12548587 12548593 GATA3 JASPAR yes 68316731
chr8 12548616 12548621 ETS2 TRANSFAC yes 68316732
chr8 12548621 12548624 MYB TRANSFAC yes 68316733
chr8 12548625 12548635 RORA JASPAR yes 68316734
chr8 12548626 12548639 NR2F1 JASPAR yes 68316735
chr8 12548627 12548642 HNF4G JASPAR yes 68316736
chr8 12548628 12548636 NR4A2 JASPAR yes 68316737
chr8 12548628 12548642 RXRB JASPAR yes 68316738
chr8 12548628 12548642 RXRG JASPAR yes 68316739
chr8 12548628 12548643 HNF4A JASPAR yes 68316740
chr8 12548629 12548646 RARA JASPAR yes 68316741
chr8 12548629 12548646 RXRA JASPAR yes 68316742
chr8 12548630 12548634 ESR1 TRANSFAC yes 68316743
chr8 12548665 12548683 RARA JASPAR yes 68316744
chr8 12548668 12548683 AR JASPAR yes 68316745
chr8 12548717 12548723 TCF4 TRANSFAC yes 68316746
chr8 12548738 12548750 CREB1 JASPAR yes 68316747
chr8 12548738 12548753 JUND JASPAR yes 68316748
chr8 12548739 12548752 JUN JASPAR yes 68316749
chr8 12548740 12548754 ATF7 JASPAR yes 68316750
chr8 12548740 12548754 BATF3 JASPAR yes 68316751
chr8 12548741 12548753 JDP2 JASPAR yes 68316752
chr8 12548741 12548756 JUND JASPAR yes 68316753
chr8 12548742 12548755 JUN JASPAR yes 68316754
chr8 12548743 12548748 ATF1 TRANSFAC yes 68316755
chr8 12548743 12548751 CREB1 JASPAR yes 68316756
chr8 12548745 12548750 ATF1 TRANSFAC yes 68316757
chr8 12548762 12548767 GATA2 JASPAR yes 68316758
chr8 12548768 12548782 PLAG1 JASPAR yes 68316759
chr8 12548779 12548784 SP1 TRANSFAC yes 68316760
chr8 12548808 12548812 NFE TRANSFAC yes 68316761
chr8 12548808 12548813 GATA1 TRANSFAC yes 68316762
chr8 12548808 12548814 GATA3 JASPAR yes 68316763
chr8 12548857 12548871 PLAG1 JASPAR yes 68316764
chr8 12548866 12548871 TFAP2A TRANSFAC yes 68316765
chr8 12548866 12548872 MZF1 JASPAR yes 68316766
SNP sites on vista58251[chr8:12548564-12548926]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr8 12548576 rs200235442 GCT G no 10290750
chr8 12548583 rs7831497 C T
MEIS1 MEIS2
10290751
chr8 12548617 rs151163479 T A
ETS2
10290752
chr8 12548627 rs73550275 A G
HNF4G NR2F1 RORA
10290753
chr8 12548632 rs192748913 G A
ESR1 HNF4A HNF4G NR2F1 NR4A2 RARA RORA RXRA RXRB RXRG
10290754
chr8 12548648 rs568194974 G A no 10290755
chr8 12548713 rs570501982 G C no 10290756
chr8 12548793 rs140333308 C T no 10290757
chr8 12548809 rs564423725 C G
GATA1 GATA3 NFE
10290758
chr8 12548827 rs7838682 A G no 10290759
chr8 12548884 rs34759127 G A no 10290760
Genes possibly regulated by vista58251[chr8:12548564-12548926]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr8 12579403 12613582 - LONRF1 ENSG00000154359.8 12613582 0.71 0.99 8142 35344
Expression level of Genes
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miRNAs possibly regulated by vista58251[chr8:12548564-12548926]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results