EnhancerDB
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  3. vista5827[chr1:241670799-241671105]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5827[chr1:241670799-241671105]
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Tissue distribution of vista5827
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Transcription factor that possibly regulate vista5827[chr1:241670799-241671105]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 241670805 241670823 SRF JASPAR yes 118494597
chr1 241670810 241670814 H1TF2 TRANSFAC yes 118494598
chr1 241670810 241670814 NFE TRANSFAC yes 118494599
chr1 241670810 241670814 SRF TRANSFAC yes 118494600
chr1 241670810 241670819 CDX1 JASPAR yes 118494601
chr1 241670810 241670820 HOXA13 JASPAR yes 118494602
chr1 241670810 241670820 HOXB13 JASPAR yes 118494603
chr1 241670810 241670820 HOXD13 JASPAR yes 118494604
chr1 241670824 241670828 TEAD2 TRANSFAC yes 118494605
chr1 241670824 241670829 TBP TRANSFAC yes 118494606
chr1 241670824 241670830 TMF TRANSFAC yes 118494607
chr1 241670835 241670848 DUXA JASPAR yes 118494608
chr1 241670840 241670861 IRF1 JASPAR yes 118494609
chr1 241670854 241670865 PHOX2A JASPAR yes 118494610
chr1 241670866 241670870 NFE TRANSFAC yes 118494611
chr1 241670870 241670884 SPIC JASPAR yes 118494612
chr1 241670871 241670884 ELF1 JASPAR yes 118494613
chr1 241670872 241670875 MYB TRANSFAC yes 118494614
chr1 241670873 241670884 ELF5 JASPAR yes 118494615
chr1 241670878 241670896 MAFF JASPAR yes 118494616
chr1 241670899 241670913 JUN JASPAR yes 118494617
chr1 241670901 241670912 BATF JASPAR yes 118494618
chr1 241670902 241670913 FOSL2 JASPAR yes 118494619
chr1 241670902 241670913 JUNB JASPAR yes 118494620
chr1 241670902 241670913 NFE2L2 JASPAR yes 118494621
chr1 241670903 241670914 FOS JASPAR yes 118494622
chr1 241670903 241670914 FOSL1 JASPAR yes 118494623
chr1 241670903 241670914 JUND JASPAR yes 118494624
chr1 241670903 241670914 NFE2 JASPAR yes 118494625
chr1 241670904 241670913 JDP2 JASPAR yes 118494626
chr1 241670904 241670915 FOSL2 JASPAR yes 118494627
chr1 241670904 241670915 JUNB JASPAR yes 118494628
chr1 241670904 241670918 JUN JASPAR yes 118494629
chr1 241670924 241670928 YY1 TRANSFAC yes 118494630
chr1 241670956 241670971 MEF2C JASPAR yes 118494631
chr1 241670957 241670972 MEF2A JASPAR yes 118494632
chr1 241670958 241670970 MEF2A JASPAR yes 118494633
chr1 241670958 241670970 MEF2B JASPAR yes 118494634
chr1 241670958 241670970 MEF2D JASPAR yes 118494635
chr1 241670959 241670969 MEF2A JASPAR yes 118494636
chr1 241670979 241670991 POU2F1 JASPAR yes 118494637
chr1 241670990 241671001 CEBPA JASPAR yes 118494638
chr1 241670996 241671012 SOX8 JASPAR yes 118494639
chr1 241670998 241671015 NR3C2 JASPAR yes 118494640
chr1 241671000 241671015 AR JASPAR yes 118494641
chr1 241671016 241671032 POU4F2 JASPAR yes 118494642
chr1 241671016 241671032 POU4F3 JASPAR yes 118494643
chr1 241671018 241671032 POU4F1 JASPAR yes 118494644
chr1 241671032 241671036 H4TF2 TRANSFAC yes 118494645
chr1 241671037 241671044 NKX3-1 JASPAR yes 118494646
chr1 241671050 241671056 TCF4 TRANSFAC yes 118494647
chr1 241671056 241671070 JUN JASPAR yes 118494648
chr1 241671057 241671063 HiNF-A TRANSFAC yes 118494649
chr1 241671089 241671096 POU2F1 TRANSFAC yes 118494650
SNP sites on vista5827[chr1:241670799-241671105]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 241670924 rs540818404 G C
YY1
1077202
chr1 241670939 rs148474718 G C no 1077203
chr1 241671004 rs115188447 C A,G
AR NR3C2 SOX8
1077204
chr1 241671032 rs564909265 T C
H4TF2 POU4F1 POU4F2 POU4F3
1077205
chr1 241671048 rs144634860 T C no 1077206
chr1 241671103 rs147447200 A G no 1077207
Genes possibly regulated by vista5827[chr1:241670799-241671105]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 241660903 241683061 - FH ENSG00000091483.6 241683061 0.74 0.98 1990 88044
chr1 241695434 241758944 + KMO ENSG00000117009.7 241695434 0.9 1.0 1991 75671
Expression level of Genes
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miRNAs possibly regulated by vista5827[chr1:241670799-241671105]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results