EnhancerDB
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  3. vista583[chr1:18503183-18503293]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista583[chr1:18503183-18503293]
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Tissue distribution of vista583
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Transcription factor that possibly regulate vista583[chr1:18503183-18503293]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 18503183 18503188 ETS2 TRANSFAC yes 27122381
chr1 18503183 18503188 ETS2 TRANSFAC yes 118242017
chr1 18503193 18503201 TBX15 JASPAR yes 27122382
chr1 18503193 18503201 TBX15 JASPAR yes 118242018
chr1 18503193 18503204 E2F6 JASPAR yes 27122383
chr1 18503193 18503204 E2F6 JASPAR yes 118242019
chr1 18503194 18503199 SP1 TRANSFAC yes 27122384
chr1 18503194 18503199 SP1 TRANSFAC yes 118242020
chr1 18503195 18503205 SP1 JASPAR yes 27122385
chr1 18503195 18503205 SP1 JASPAR yes 118242021
chr1 18503202 18503214 ELF4 JASPAR yes 27122386
chr1 18503202 18503214 ELF4 JASPAR yes 118242022
chr1 18503242 18503256 EBF1 JASPAR yes 27122387
chr1 18503242 18503256 EBF1 JASPAR yes 118242023
chr1 18503243 18503254 EBF1 JASPAR yes 27122388
chr1 18503243 18503254 EBF1 JASPAR yes 118242024
chr1 18503243 18503262 RFX2 JASPAR yes 27122389
chr1 18503243 18503262 RFX2 JASPAR yes 118242025
chr1 18503244 18503250 MZF1 JASPAR yes 27122390
chr1 18503244 18503250 MZF1 JASPAR yes 118242026
chr1 18503249 18503254 ETS2 TRANSFAC yes 27122391
chr1 18503249 18503254 ETS2 TRANSFAC yes 118242027
chr1 18503251 18503260 SRY JASPAR yes 27122392
chr1 18503251 18503260 SRY JASPAR yes 118242028
chr1 18503274 18503289 RUNX2 JASPAR yes 27122393
chr1 18503274 18503289 RUNX2 JASPAR yes 118242029
chr1 18503275 18503278 MYB TRANSFAC yes 27122394
chr1 18503275 18503278 MYB TRANSFAC yes 118242030
chr1 18503275 18503284 RUNX2 JASPAR yes 27122395
chr1 18503275 18503284 RUNX2 JASPAR yes 118242031
chr1 18503275 18503285 RUNX3 JASPAR yes 27122396
chr1 18503275 18503285 RUNX3 JASPAR yes 118242032
chr1 18503275 18503286 RUNX1 JASPAR yes 27122397
chr1 18503275 18503286 RUNX1 JASPAR yes 118242033
chr1 18503281 18503295 POU1F1 JASPAR yes 27122398
chr1 18503281 18503295 POU1F1 JASPAR yes 118242034
chr1 18503281 18503296 FOXP1 JASPAR yes 27122399
chr1 18503281 18503296 FOXP1 JASPAR yes 118242035
chr1 18503282 18503293 FOXA1 JASPAR yes 27122400
chr1 18503282 18503293 FOXA1 JASPAR yes 118242036
chr1 18503282 18503294 POU3F1 JASPAR yes 27122401
chr1 18503282 18503294 POU3F2 JASPAR yes 27122402
chr1 18503282 18503294 POU3F1 JASPAR yes 118242037
chr1 18503282 18503294 POU3F2 JASPAR yes 118242038
chr1 18503282 18503295 POU2F2 JASPAR yes 27122403
chr1 18503282 18503295 POU2F2 JASPAR yes 118242039
chr1 18503282 18503297 FOXA1 JASPAR yes 27122404
chr1 18503282 18503297 FOXA1 JASPAR yes 118242040
chr1 18503283 18503292 POU3F4 JASPAR yes 27122405
chr1 18503283 18503292 POU5F1B JASPAR yes 27122406
chr1 18503283 18503292 POU3F4 JASPAR yes 118242041
chr1 18503283 18503292 POU5F1B JASPAR yes 118242042
chr1 18503283 18503294 FOXB1 JASPAR yes 27122407
chr1 18503283 18503294 FOXC1 JASPAR yes 27122408
chr1 18503283 18503294 FOXB1 JASPAR yes 118242043
chr1 18503283 18503294 FOXC1 JASPAR yes 118242044
chr1 18503283 18503295 FOXC2 JASPAR yes 27122409
chr1 18503283 18503295 FOXC2 JASPAR yes 118242045
SNP sites on vista583[chr1:18503183-18503293]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 18503247 rs34041650 C T
EBF1 MZF1 RFX2
122889
chr1 18503287 rs77944147 G A
FOXA1 FOXB1 FOXC1 FOXC2 FOXP1 POU1F1 POU2F2 POU3F1 POU3F2 POU3F4 POU5F1B RUNX2
122890
Genes possibly regulated by vista583[chr1:18503183-18503293]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 18434240 18704977 + IGSF21 ENSG00000117154.7 18434240 0.96 0.0 249 31057
Expression level of Genes
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miRNAs possibly regulated by vista583[chr1:18503183-18503293]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results